EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0028966 (Gene tree)
Gene ID: -
Gene Symbol: Papolb
Alias: Papola-ps|Papt|Plap-ps|TPAP
Full Name: poly (A) polymerase beta (testis specific)
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 4228 bases
Position: chr5:143444698-143448925
Accession: 1932115
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0074737	PAP_RNA-bind	PF04926.15	1.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0074737	-	4228	-	MGP_SPRETEiJ_P0074737	642 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0028966's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0028966's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0028966	Papolb	99	85.692	MGP_SPRETEiJ_G0018943	Papola	93	85.692
MGP_SPRETEiJ_G0028966	Papolb	86	68.240	MGP_SPRETEiJ_G0016987	Papolg	95	78.973

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0028966	Papolb	97	87.019	ENSG00000218823	PAPOLB	98	87.019	Homo_sapiens
MGP_SPRETEiJ_G0028966	Papolb	97	82.372	ENSANAG00000033074	PAPOLB	98	82.372	Aotus_nancymaae
MGP_SPRETEiJ_G0028966	Papolb	99	87.500	ENSBTAG00000052734	PAPOLB	94	87.500	Bos_taurus
MGP_SPRETEiJ_G0028966	Papolb	79	86.957	ENSCPOG00000021527	PAPOLB	99	79.894	Cavia_porcellus
MGP_SPRETEiJ_G0028966	Papolb	99	86.137	ENSCLAG00000004689	PAPOLB	100	86.137	Chinchilla_lanigera
MGP_SPRETEiJ_G0028966	Papolb	98	83.703	ENSDNOG00000033378	PAPOLB	90	83.703	Dasypus_novemcinctus
MGP_SPRETEiJ_G0028966	Papolb	95	90.375	ENSDORG00000001140	Papolb	99	89.065	Dipodomys_ordii
MGP_SPRETEiJ_G0028966	Papolb	97	87.581	ENSEASG00005021531	PAPOLB	93	86.094	Equus_asinus_asinus
MGP_SPRETEiJ_G0028966	Papolb	93	79.466	ENSHGLG00000002987	-	98	79.466	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0028966	Papolb	99	93.281	ENSJJAG00000012212	Papolb	92	93.281	Jaculus_jaculus
MGP_SPRETEiJ_G0028966	Papolb	86	90.364	ENSMFAG00000031074	PAPOLB	99	90.364	Macaca_fascicularis
MGP_SPRETEiJ_G0028966	Papolb	99	86.207	ENSMMUG00000043732	PAPOLB	89	87.319	Macaca_mulatta
MGP_SPRETEiJ_G0028966	Papolb	100	99.688	MGP_CAROLIEiJ_G0027962	Papolb	100	99.688	Mus_caroli
MGP_SPRETEiJ_G0028966	Papolb	100	99.844	ENSMUSG00000074817	Papolb	100	99.844	Mus_musculus
MGP_SPRETEiJ_G0028966	Papolb	100	97.975	MGP_PahariEiJ_G0024534	Papolb	100	97.975	Mus_pahari
MGP_SPRETEiJ_G0028966	Papolb	99	85.491	ENSMLUG00000029802	PAPOLB	97	85.491	Myotis_lucifugus
MGP_SPRETEiJ_G0028966	Papolb	99	87.500	ENSODEG00000009844	PAPOLB	95	87.500	Octodon_degus
MGP_SPRETEiJ_G0028966	Papolb	99	84.112	ENSOCUG00000022988	PAPOLB	100	89.680	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0028966	Papolb	99	89.704	ENSOGAG00000031103	PAPOLB	91	89.704	Otolemur_garnettii
MGP_SPRETEiJ_G0028966	Papolb	97	86.677	ENSPTRG00000045383	PAPOLB	91	86.677	Pan_troglodytes
MGP_SPRETEiJ_G0028966	Papolb	98	89.474	ENSUMAG00000007631	PAPOLB	99	89.474	Ursus_maritimus