EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0029162 (Gene tree)
Gene ID: -
Gene Symbol: Rbm28
Alias: 2810480G15Rik
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 45445 bases
Position: chr6:26192113-26237557
Accession: 2655711
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0075735	RRM_1	PF00076.22	3.7e-55	1	4
MGP_SPRETEiJ_P0075735	RRM_1	PF00076.22	3.7e-55	2	4
MGP_SPRETEiJ_P0075735	RRM_1	PF00076.22	3.7e-55	3	4
MGP_SPRETEiJ_P0075735	RRM_1	PF00076.22	3.7e-55	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0075737	-	636	-	MGP_SPRETEiJ_P0075737	133 (aa)	-	-
MGP_SPRETEiJ_T0075736	-	1917	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0075735	-	4461	-	MGP_SPRETEiJ_P0075735	750 (aa)	-	-
MGP_SPRETEiJ_T0075739	-	770	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0075738	-	938	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0075740	-	495	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0029162's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0029162's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0029162	Rbm28	100	80.840	ENSG00000106344	RBM28	100	97.500	Homo_sapiens
MGP_SPRETEiJ_G0029162	Rbm28	58	54.688	ENSAPOG00000015512	rbm28	100	52.067	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0029162	Rbm28	100	83.654	ENSAMEG00000004776	RBM28	92	90.625	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0029162	Rbm28	56	56.161	ENSACIG00000023153	rbm28	99	52.263	Amphilophus_citrinellus
MGP_SPRETEiJ_G0029162	Rbm28	58	55.479	ENSAOCG00000000462	rbm28	100	51.630	Amphiprion_ocellaris
MGP_SPRETEiJ_G0029162	Rbm28	58	55.251	ENSAPEG00000012996	rbm28	100	51.418	Amphiprion_percula
MGP_SPRETEiJ_G0029162	Rbm28	58	51.386	ENSATEG00000001672	rbm28	100	48.539	Anabas_testudineus
MGP_SPRETEiJ_G0029162	Rbm28	100	81.746	ENSANAG00000033922	RBM28	100	81.614	Aotus_nancymaae
MGP_SPRETEiJ_G0029162	Rbm28	100	50.317	ENSACLG00000025024	rbm28	100	50.636	Astatotilapia_calliptera
MGP_SPRETEiJ_G0029162	Rbm28	58	57.763	ENSAMXG00000000763	rbm28	99	58.998	Astyanax_mexicanus
MGP_SPRETEiJ_G0029162	Rbm28	100	79.521	ENSBTAG00000017001	RBM28	100	97.500	Bos_taurus
MGP_SPRETEiJ_G0029162	Rbm28	100	79.685	ENSCJAG00000017731	RBM28	100	79.817	Callithrix_jacchus
MGP_SPRETEiJ_G0029162	Rbm28	100	80.744	ENSCAFG00000001667	RBM28	100	81.009	Canis_familiaris
MGP_SPRETEiJ_G0029162	Rbm28	100	80.744	ENSCAFG00020021648	RBM28	100	81.009	Canis_lupus_dingo
MGP_SPRETEiJ_G0029162	Rbm28	100	79.178	ENSCHIG00000014146	RBM28	100	79.310	Capra_hircus
MGP_SPRETEiJ_G0029162	Rbm28	100	79.974	ENSTSYG00000002892	RBM28	100	92.500	Carlito_syrichta
MGP_SPRETEiJ_G0029162	Rbm28	83	61.981	ENSCAPG00000013218	RBM28	100	62.460	Cavia_aperea
MGP_SPRETEiJ_G0029162	Rbm28	100	81.423	ENSCPOG00000006253	RBM28	100	81.423	Cavia_porcellus
MGP_SPRETEiJ_G0029162	Rbm28	100	78.804	ENSCCAG00000035105	RBM28	100	80.658	Cebus_capucinus
MGP_SPRETEiJ_G0029162	Rbm28	100	80.341	ENSCATG00000040497	RBM28	100	95.000	Cercocebus_atys
MGP_SPRETEiJ_G0029162	Rbm28	100	78.353	ENSCLAG00000003707	RBM28	100	78.619	Chinchilla_lanigera
MGP_SPRETEiJ_G0029162	Rbm28	100	80.789	ENSCSAG00000010161	RBM28	100	80.921	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0029162	Rbm28	57	87.903	ENSCHOG00000001994	-	63	87.903	Choloepus_hoffmanni
MGP_SPRETEiJ_G0029162	Rbm28	51	60.959	ENSCPBG00000018088	RBM28	87	59.013	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0029162	Rbm28	53	55.670	ENSCSAVG00000007149	-	95	44.412	Ciona_savignyi
MGP_SPRETEiJ_G0029162	Rbm28	90	80.418	ENSCANG00000038397	RBM28	100	97.500	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0029162	Rbm28	67	89.109	ENSCGRG00001021278	Rbm28	100	84.527	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0029162	Rbm28	100	86.239	ENSCGRG00000005098	Rbm28	100	86.370	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0029162	Rbm28	100	50.582	ENSCSEG00000004212	rbm28	100	50.517	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0029162	Rbm28	58	54.767	ENSCVAG00000010493	rbm28	99	49.936	Cyprinodon_variegatus
MGP_SPRETEiJ_G0029162	Rbm28	88	57.143	ENSDARG00000025332	rbm28	100	48.372	Danio_rerio
MGP_SPRETEiJ_G0029162	Rbm28	100	78.393	ENSDNOG00000001124	RBM28	100	78.656	Dasypus_novemcinctus
MGP_SPRETEiJ_G0029162	Rbm28	66	82.294	ENSDORG00000004184	Rbm28	97	82.495	Dipodomys_ordii
MGP_SPRETEiJ_G0029162	Rbm28	66	39.718	FBgn0260456	CG4806	68	39.400	Drosophila_melanogaster
MGP_SPRETEiJ_G0029162	Rbm28	100	71.126	ENSETEG00000007130	RBM28	99	71.126	Echinops_telfairi
MGP_SPRETEiJ_G0029162	Rbm28	99	40.186	ENSEBUG00000004419	rbm28	98	41.689	Eptatretus_burgeri
MGP_SPRETEiJ_G0029162	Rbm28	100	80.364	ENSEASG00005008528	RBM28	100	79.974	Equus_asinus_asinus
MGP_SPRETEiJ_G0029162	Rbm28	100	80.260	ENSECAG00000007745	RBM28	100	79.870	Equus_caballus
MGP_SPRETEiJ_G0029162	Rbm28	100	72.468	ENSEEUG00000002389	RBM28	100	72.468	Erinaceus_europaeus
MGP_SPRETEiJ_G0029162	Rbm28	100	51.786	ENSELUG00000020602	rbm28	100	52.478	Esox_lucius
MGP_SPRETEiJ_G0029162	Rbm28	100	81.117	ENSFCAG00000000946	RBM28	100	97.500	Felis_catus
MGP_SPRETEiJ_G0029162	Rbm28	100	82.713	ENSFDAG00000010169	RBM28	100	82.048	Fukomys_damarensis
MGP_SPRETEiJ_G0029162	Rbm28	58	52.620	ENSGMOG00000007091	rbm28	99	47.757	Gadus_morhua
MGP_SPRETEiJ_G0029162	Rbm28	59	55.580	ENSGAFG00000004802	rbm28	98	56.027	Gambusia_affinis
MGP_SPRETEiJ_G0029162	Rbm28	58	54.911	ENSGACG00000012612	rbm28	100	49.867	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0029162	Rbm28	76	78.022	ENSGAGG00000008873	RBM28	89	78.022	Gopherus_agassizii
MGP_SPRETEiJ_G0029162	Rbm28	95	79.363	ENSGGOG00000004644	RBM28	97	79.640	Gorilla_gorilla
MGP_SPRETEiJ_G0029162	Rbm28	90	51.404	ENSHBUG00000009611	rbm28	98	50.964	Haplochromis_burtoni
MGP_SPRETEiJ_G0029162	Rbm28	100	82.157	ENSHGLG00000005409	RBM28	100	82.157	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0029162	Rbm28	100	82.157	ENSHGLG00100016458	RBM28	100	82.157	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0029162	Rbm28	83	47.396	ENSHCOG00000010597	rbm28	98	47.120	Hippocampus_comes
MGP_SPRETEiJ_G0029162	Rbm28	63	45.474	ENSIPUG00000007103	rbm28	94	46.091	Ictalurus_punctatus
MGP_SPRETEiJ_G0029162	Rbm28	100	81.877	ENSSTOG00000002169	RBM28	100	81.877	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0029162	Rbm28	100	75.491	ENSJJAG00000022400	Rbm28	100	75.066	Jaculus_jaculus
MGP_SPRETEiJ_G0029162	Rbm28	59	54.464	ENSKMAG00000013348	rbm28	99	50.328	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0029162	Rbm28	58	55.982	ENSLBEG00000012998	rbm28	100	50.318	Labrus_bergylta
MGP_SPRETEiJ_G0029162	Rbm28	74	56.239	ENSLACG00000010485	-	100	55.672	Latimeria_chalumnae
MGP_SPRETEiJ_G0029162	Rbm28	91	63.590	ENSLOCG00000015541	rbm28	81	62.371	Lepisosteus_oculatus
MGP_SPRETEiJ_G0029162	Rbm28	100	79.657	ENSLAFG00000010717	RBM28	100	78.920	Loxodonta_africana
MGP_SPRETEiJ_G0029162	Rbm28	100	80.472	ENSMFAG00000031036	RBM28	100	95.000	Macaca_fascicularis
MGP_SPRETEiJ_G0029162	Rbm28	100	80.497	ENSMMUG00000007250	RBM28	100	95.000	Macaca_mulatta
MGP_SPRETEiJ_G0029162	Rbm28	100	80.078	ENSMNEG00000036970	RBM28	100	95.000	Macaca_nemestrina
MGP_SPRETEiJ_G0029162	Rbm28	83	79.574	ENSMLEG00000037717	RBM28	100	79.362	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0029162	Rbm28	100	51.804	ENSMAMG00000008525	rbm28	100	52.202	Mastacembelus_armatus
MGP_SPRETEiJ_G0029162	Rbm28	93	49.592	ENSMZEG00005019625	rbm28	100	50.000	Maylandia_zebra
MGP_SPRETEiJ_G0029162	Rbm28	100	82.776	ENSMAUG00000002263	Rbm28	100	82.391	Mesocricetus_auratus
MGP_SPRETEiJ_G0029162	Rbm28	93	77.317	ENSMICG00000000107	RBM28	100	77.593	Microcebus_murinus
MGP_SPRETEiJ_G0029162	Rbm28	100	87.766	ENSMOCG00000014615	Rbm28	100	87.766	Microtus_ochrogaster
MGP_SPRETEiJ_G0029162	Rbm28	58	53.211	ENSMMOG00000008600	rbm28	100	51.440	Mola_mola
MGP_SPRETEiJ_G0029162	Rbm28	100	68.791	ENSMODG00000015151	RBM28	100	70.926	Monodelphis_domestica
MGP_SPRETEiJ_G0029162	Rbm28	58	54.484	ENSMALG00000006419	rbm28	100	48.604	Monopterus_albus
MGP_SPRETEiJ_G0029162	Rbm28	100	97.473	MGP_CAROLIEiJ_G0028162	Rbm28	100	97.473	Mus_caroli
MGP_SPRETEiJ_G0029162	Rbm28	100	99.200	ENSMUSG00000029701	Rbm28	100	99.200	Mus_musculus
MGP_SPRETEiJ_G0029162	Rbm28	100	96.282	MGP_PahariEiJ_G0021920	Rbm28	100	96.282	Mus_pahari
MGP_SPRETEiJ_G0029162	Rbm28	100	80.000	ENSMPUG00000006511	RBM28	100	80.000	Mustela_putorius_furo
MGP_SPRETEiJ_G0029162	Rbm28	100	79.188	ENSMLUG00000002186	RBM28	100	79.292	Myotis_lucifugus
MGP_SPRETEiJ_G0029162	Rbm28	100	80.080	ENSNGAG00000017946	-	100	79.814	Nannospalax_galili
MGP_SPRETEiJ_G0029162	Rbm28	100	82.228	ENSNGAG00000006480	-	100	82.361	Nannospalax_galili
MGP_SPRETEiJ_G0029162	Rbm28	100	80.026	ENSNLEG00000012307	RBM28	100	97.500	Nomascus_leucogenys
MGP_SPRETEiJ_G0029162	Rbm28	81	80.864	ENSMEUG00000009611	RBM28	91	80.864	Notamacropus_eugenii
MGP_SPRETEiJ_G0029162	Rbm28	90	72.745	ENSOPRG00000015140	RBM28	90	74.374	Ochotona_princeps
MGP_SPRETEiJ_G0029162	Rbm28	81	82.160	ENSODEG00000013217	-	87	82.160	Octodon_degus
MGP_SPRETEiJ_G0029162	Rbm28	100	77.719	ENSODEG00000003213	-	100	77.851	Octodon_degus
MGP_SPRETEiJ_G0029162	Rbm28	58	55.605	ENSONIG00000014924	rbm28	100	50.579	Oreochromis_niloticus
MGP_SPRETEiJ_G0029162	Rbm28	100	64.389	ENSOANG00000000815	-	100	65.138	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0029162	Rbm28	100	77.995	ENSOCUG00000003009	RBM28	100	78.255	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0029162	Rbm28	99	50.191	ENSORLG00000009636	rbm28	99	51.507	Oryzias_latipes
MGP_SPRETEiJ_G0029162	Rbm28	58	54.628	ENSORLG00020002123	rbm28	99	51.120	Oryzias_latipes_hni
MGP_SPRETEiJ_G0029162	Rbm28	89	61.244	ENSORLG00015015030	rbm28	99	59.903	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0029162	Rbm28	58	57.111	ENSOMEG00000007801	rbm28	100	51.592	Oryzias_melastigma
MGP_SPRETEiJ_G0029162	Rbm28	94	90.000	ENSOGAG00000006011	RBM28	100	90.000	Otolemur_garnettii
MGP_SPRETEiJ_G0029162	Rbm28	100	79.045	ENSOARG00000002547	RBM28	100	78.912	Ovis_aries
MGP_SPRETEiJ_G0029162	Rbm28	100	80.366	ENSPPAG00000041730	RBM28	100	97.500	Pan_paniscus
MGP_SPRETEiJ_G0029162	Rbm28	100	80.053	ENSPPRG00000004420	RBM28	100	97.500	Panthera_pardus
MGP_SPRETEiJ_G0029162	Rbm28	100	80.718	ENSPTIG00000008550	RBM28	100	97.500	Panthera_tigris_altaica
MGP_SPRETEiJ_G0029162	Rbm28	100	80.628	ENSPTRG00000019659	RBM28	100	97.500	Pan_troglodytes
MGP_SPRETEiJ_G0029162	Rbm28	100	80.497	ENSPANG00000022295	RBM28	100	95.000	Papio_anubis
MGP_SPRETEiJ_G0029162	Rbm28	99	51.500	ENSPKIG00000023453	rbm28	99	51.429	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0029162	Rbm28	88	54.009	ENSPMGG00000012840	rbm28	100	49.601	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0029162	Rbm28	100	85.126	ENSPEMG00000020673	Rbm28	100	85.200	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0029162	Rbm28	100	69.444	ENSPCIG00000012810	RBM28	100	71.014	Phascolarctos_cinereus
MGP_SPRETEiJ_G0029162	Rbm28	59	56.473	ENSPFOG00000018209	rbm28	100	49.682	Poecilia_formosa
MGP_SPRETEiJ_G0029162	Rbm28	58	55.631	ENSPLAG00000016078	rbm28	96	50.585	Poecilia_latipinna
MGP_SPRETEiJ_G0029162	Rbm28	59	56.347	ENSPMEG00000004292	rbm28	100	49.045	Poecilia_mexicana
MGP_SPRETEiJ_G0029162	Rbm28	57	55.275	ENSPREG00000014287	rbm28	98	50.067	Poecilia_reticulata
MGP_SPRETEiJ_G0029162	Rbm28	100	81.053	ENSPPYG00000017975	RBM28	100	81.184	Pongo_abelii
MGP_SPRETEiJ_G0029162	Rbm28	74	74.930	ENSPCAG00000008223	RBM28	83	75.000	Procavia_capensis
MGP_SPRETEiJ_G0029162	Rbm28	100	78.961	ENSPCOG00000016797	RBM28	100	97.500	Propithecus_coquereli
MGP_SPRETEiJ_G0029162	Rbm28	78	89.302	ENSPVAG00000005443	RBM28	77	89.302	Pteropus_vampyrus
MGP_SPRETEiJ_G0029162	Rbm28	100	50.190	ENSPNYG00000014003	rbm28	100	50.448	Pundamilia_nyererei
MGP_SPRETEiJ_G0029162	Rbm28	100	89.536	ENSRNOG00000005468	Rbm28	100	89.669	Rattus_norvegicus
MGP_SPRETEiJ_G0029162	Rbm28	100	80.654	ENSRBIG00000033990	RBM28	100	97.500	Rhinopithecus_bieti
MGP_SPRETEiJ_G0029162	Rbm28	100	80.366	ENSRROG00000040747	RBM28	100	97.500	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0029162	Rbm28	91	74.413	ENSSBOG00000012308	RBM28	100	74.413	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0029162	Rbm28	96	66.759	ENSSHAG00000017017	RBM28	99	65.887	Sarcophilus_harrisii
MGP_SPRETEiJ_G0029162	Rbm28	100	51.774	ENSSFOG00015001231	rbm28	100	52.818	Scleropages_formosus
MGP_SPRETEiJ_G0029162	Rbm28	58	52.273	ENSSMAG00000003885	rbm28	99	50.413	Scophthalmus_maximus
MGP_SPRETEiJ_G0029162	Rbm28	58	56.444	ENSSLDG00000020099	rbm28	100	50.771	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0029162	Rbm28	76	84.184	ENSSARG00000008303	RBM28	80	83.889	Sorex_araneus
MGP_SPRETEiJ_G0029162	Rbm28	67	70.588	ENSSPUG00000000838	RBM28	79	70.588	Sphenodon_punctatus
MGP_SPRETEiJ_G0029162	Rbm28	58	53.642	ENSSPAG00000023305	rbm28	100	49.932	Stegastes_partitus
MGP_SPRETEiJ_G0029162	Rbm28	100	79.657	ENSSSCG00000031847	RBM28	100	79.683	Sus_scrofa
MGP_SPRETEiJ_G0029162	Rbm28	58	53.744	ENSTRUG00000013311	rbm28	99	49.305	Takifugu_rubripes
MGP_SPRETEiJ_G0029162	Rbm28	99	50.454	ENSTNIG00000017962	rbm28	99	49.806	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0029162	Rbm28	85	86.012	ENSTBEG00000012749	RBM28	86	86.012	Tupaia_belangeri
MGP_SPRETEiJ_G0029162	Rbm28	100	76.802	ENSTTRG00000013647	RBM28	100	77.064	Tursiops_truncatus
MGP_SPRETEiJ_G0029162	Rbm28	100	74.211	ENSUAMG00000006949	RBM28	100	74.605	Ursus_americanus
MGP_SPRETEiJ_G0029162	Rbm28	100	80.581	ENSUMAG00000005997	RBM28	100	80.581	Ursus_maritimus
MGP_SPRETEiJ_G0029162	Rbm28	87	72.796	ENSVPAG00000008304	RBM28	87	72.796	Vicugna_pacos
MGP_SPRETEiJ_G0029162	Rbm28	100	80.478	ENSVVUG00000007270	RBM28	100	80.744	Vulpes_vulpes
MGP_SPRETEiJ_G0029162	Rbm28	99	54.464	ENSXETG00000009271	rbm28	99	54.522	Xenopus_tropicalis
MGP_SPRETEiJ_G0029162	Rbm28	59	53.741	ENSXCOG00000020357	rbm28	99	51.335	Xiphophorus_couchianus
MGP_SPRETEiJ_G0029162	Rbm28	59	55.011	ENSXMAG00000004415	rbm28	100	50.648	Xiphophorus_maculatus