EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_SPRETEiJ_G0029183 (Gene tree)
Gene ID
-
Gene Symbol
Zc3hc1
Alias
1110054L24Rik|HSPC216|Nipa
Full Name
zinc finger%2C C3HC type 1
Gene Type
protein_coding
Species
Mus_spretus
Status
putative
Strand
Minus strand
Length
26647 bases
Position
chr6:27549645-27576291
Accession
1916023
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_SPRETEiJ_P0075877zf-C3HCPF07967.133.5e-3611
MGP_SPRETEiJ_P0075875zf-C3HCPF07967.135.7e-3611
MGP_SPRETEiJ_P0075874zf-C3HCPF07967.131.1e-3511
MGP_SPRETEiJ_P0075874Rsm1PF08600.104.8e-1611
MGP_SPRETEiJ_P0075877Rsm1PF08600.102.4e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_SPRETEiJ_T0075878-447--- (aa)--
MGP_SPRETEiJ_T0075879-787-MGP_SPRETEiJ_P007587949 (aa)--
MGP_SPRETEiJ_T0075881-556-MGP_SPRETEiJ_P007588144 (aa)--
MGP_SPRETEiJ_T0075880-477--- (aa)--
MGP_SPRETEiJ_T0075883-362--- (aa)--
MGP_SPRETEiJ_T0075882-2714--- (aa)--
MGP_SPRETEiJ_T0075874-1807-MGP_SPRETEiJ_P0075874501 (aa)--
MGP_SPRETEiJ_T0075875-1672-MGP_SPRETEiJ_P0075875459 (aa)--
MGP_SPRETEiJ_T0075876-842--- (aa)--
MGP_SPRETEiJ_T0075877-1503-MGP_SPRETEiJ_P0075877430 (aa)--
Gene Model
Click here to download MGP_SPRETEiJ_G0029183's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0029183's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_SPRETEiJ_G0029183Zc3hc19985.542ENSG00000091732ZC3HC19985.542Homo_sapiens
MGP_SPRETEiJ_G0029183Zc3hc19545.672ENSAPOG00000009078zc3hc19642.800Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0029183Zc3hc110085.119ENSAMEG00000005425ZC3HC110085.119Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0029183Zc3hc19545.427ENSACIG00000019513zc3hc19641.717Amphilophus_citrinellus
MGP_SPRETEiJ_G0029183Zc3hc19546.269ENSAOCG00000024310zc3hc19643.400Amphiprion_ocellaris
MGP_SPRETEiJ_G0029183Zc3hc19546.269ENSAPEG00000004907zc3hc19643.400Amphiprion_percula
MGP_SPRETEiJ_G0029183Zc3hc17850.859ENSATEG00000016898zc3hc18546.009Anabas_testudineus
MGP_SPRETEiJ_G0029183Zc3hc18859.234ENSAPLG00000003832ZC3HC19959.234Anas_platyrhynchos
MGP_SPRETEiJ_G0029183Zc3hc19560.408ENSACAG00000001638ZC3HC19560.408Anolis_carolinensis
MGP_SPRETEiJ_G0029183Zc3hc110084.223ENSANAG00000022213ZC3HC110084.223Aotus_nancymaae
MGP_SPRETEiJ_G0029183Zc3hc18746.906ENSACLG00000025033zc3hc19942.887Astatotilapia_calliptera
MGP_SPRETEiJ_G0029183Zc3hc19443.776ENSAMXG00000036792zc3hc19742.827Astyanax_mexicanus
MGP_SPRETEiJ_G0029183Zc3hc110085.060ENSBTAG00000011247ZC3HC110085.060Bos_taurus
MGP_SPRETEiJ_G0029183Zc3hc110083.665ENSCJAG00000010536ZC3HC19984.878Callithrix_jacchus
MGP_SPRETEiJ_G0029183Zc3hc110086.653ENSCAFG00000029401-9986.653Canis_familiaris
MGP_SPRETEiJ_G0029183Zc3hc110087.052ENSCAFG00000031850-10087.052Canis_familiaris
MGP_SPRETEiJ_G0029183Zc3hc110086.139ENSCAFG00000001499-9986.139Canis_familiaris
MGP_SPRETEiJ_G0029183Zc3hc110086.653ENSCAFG00000028735-10086.653Canis_familiaris
MGP_SPRETEiJ_G0029183Zc3hc110085.119ENSCAFG00020023333-10085.119Canis_lupus_dingo
MGP_SPRETEiJ_G0029183Zc3hc110086.853ENSCAFG00020006829-10086.853Canis_lupus_dingo
MGP_SPRETEiJ_G0029183Zc3hc110078.287ENSCHIG00000014103ZC3HC110078.287Capra_hircus
MGP_SPRETEiJ_G0029183Zc3hc110082.072ENSTSYG00000002843ZC3HC19982.530Carlito_syrichta
MGP_SPRETEiJ_G0029183Zc3hc19063.596ENSCAPG00000016300ZC3HC110062.175Cavia_aperea
MGP_SPRETEiJ_G0029183Zc3hc110080.974ENSCPOG00000014034ZC3HC110080.974Cavia_porcellus
MGP_SPRETEiJ_G0029183Zc3hc110067.331ENSCCAG00000020384ZC3HC110086.784Cebus_capucinus
MGP_SPRETEiJ_G0029183Zc3hc110085.857ENSCATG00000023130ZC3HC110085.857Cercocebus_atys
MGP_SPRETEiJ_G0029183Zc3hc110063.617ENSCLAG00000008260ZC3HC110063.261Chinchilla_lanigera
MGP_SPRETEiJ_G0029183Zc3hc17386.066ENSCSAG00000009881ZC3HC19786.066Chlorocebus_sabaeus
MGP_SPRETEiJ_G0029183Zc3hc18886.644ENSCHOG00000011846ZC3HC19985.523Choloepus_hoffmanni
MGP_SPRETEiJ_G0029183Zc3hc19665.975ENSCPBG00000017519ZC3HC19665.975Chrysemys_picta_bellii
MGP_SPRETEiJ_G0029183Zc3hc110085.458ENSCANG00000029091ZC3HC110085.458Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0029183Zc3hc110090.930ENSCGRG00001018805Zc3hc110090.930Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0029183Zc3hc110089.621ENSCGRG00000017114Zc3hc110089.621Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0029183Zc3hc19642.315ENSCSEG00000009284zc3hc19541.916Cynoglossus_semilaevis
MGP_SPRETEiJ_G0029183Zc3hc19345.732ENSCVAG00000011566zc3hc19542.626Cyprinodon_variegatus
MGP_SPRETEiJ_G0029183Zc3hc19647.166ENSDARG00000062651zc3hc19647.166Danio_rerio
MGP_SPRETEiJ_G0029183Zc3hc110083.865ENSDNOG00000045016ZC3HC110083.865Dasypus_novemcinctus
MGP_SPRETEiJ_G0029183Zc3hc110076.295ENSDORG00000008697Zc3hc110076.295Dipodomys_ordii
MGP_SPRETEiJ_G0029183Zc3hc19087.389ENSEASG00005008789ZC3HC19787.389Equus_asinus_asinus
MGP_SPRETEiJ_G0029183Zc3hc110085.288ENSECAG00000017886ZC3HC110085.288Equus_caballus
MGP_SPRETEiJ_G0029183Zc3hc19277.160ENSEEUG00000003123ZC3HC18477.160Erinaceus_europaeus
MGP_SPRETEiJ_G0029183Zc3hc19149.793ENSELUG00000023168zc3hc19544.048Esox_lucius
MGP_SPRETEiJ_G0029183Zc3hc110084.263ENSFCAG00000010429ZC3HC110084.263Felis_catus
MGP_SPRETEiJ_G0029183Zc3hc19056.838ENSFALG00000005006ZC3HC110056.838Ficedula_albicollis
MGP_SPRETEiJ_G0029183Zc3hc110082.599ENSFDAG00000019897ZC3HC110082.599Fukomys_damarensis
MGP_SPRETEiJ_G0029183Zc3hc19545.482ENSFHEG00000020149zc3hc19641.650Fundulus_heteroclitus
MGP_SPRETEiJ_G0029183Zc3hc19441.856ENSGMOG00000002914zc3hc19540.530Gadus_morhua
MGP_SPRETEiJ_G0029183Zc3hc19661.203ENSGALG00000008003ZC3HC19661.506Gallus_gallus
MGP_SPRETEiJ_G0029183Zc3hc19643.287ENSGAFG00000016095zc3hc19642.914Gambusia_affinis
MGP_SPRETEiJ_G0029183Zc3hc19443.967ENSGACG00000019706zc3hc19543.585Gasterosteus_aculeatus
MGP_SPRETEiJ_G0029183Zc3hc17766.244ENSGAGG00000016106ZC3HC110066.244Gopherus_agassizii
MGP_SPRETEiJ_G0029183Zc3hc19985.341ENSGGOG00000015504ZC3HC19985.341Gorilla_gorilla
MGP_SPRETEiJ_G0029183Zc3hc19345.897ENSHBUG00000008347zc3hc19542.394Haplochromis_burtoni
MGP_SPRETEiJ_G0029183Zc3hc110082.831ENSHGLG00000005085ZC3HC110082.831Heterocephalus_glaber_female
MGP_SPRETEiJ_G0029183Zc3hc110082.599ENSHGLG00100011395ZC3HC110082.599Heterocephalus_glaber_male
MGP_SPRETEiJ_G0029183Zc3hc19642.449ENSHCOG00000014309zc3hc19642.566Hippocampus_comes
MGP_SPRETEiJ_G0029183Zc3hc110084.661ENSSTOG00000023599-10084.661Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0029183Zc3hc19346.789ENSKMAG00000015315zc3hc18942.799Kryptolebias_marmoratus
MGP_SPRETEiJ_G0029183Zc3hc19445.161ENSLBEG00000017325zc3hc19642.460Labrus_bergylta
MGP_SPRETEiJ_G0029183Zc3hc17954.634ENSLACG00000013032ZC3HC19752.278Latimeria_chalumnae
MGP_SPRETEiJ_G0029183Zc3hc19953.468ENSLOCG00000015963zc3hc19951.172Lepisosteus_oculatus
MGP_SPRETEiJ_G0029183Zc3hc110082.806ENSLAFG00000001292ZC3HC110082.806Loxodonta_africana
MGP_SPRETEiJ_G0029183Zc3hc110085.657ENSMFAG00000030176ZC3HC110085.657Macaca_fascicularis
MGP_SPRETEiJ_G0029183Zc3hc110085.615ENSMMUG00000006155ZC3HC110085.615Macaca_mulatta
MGP_SPRETEiJ_G0029183Zc3hc110085.857ENSMNEG00000011833ZC3HC19887.981Macaca_nemestrina
MGP_SPRETEiJ_G0029183Zc3hc110085.857ENSMLEG00000027328ZC3HC110085.857Mandrillus_leucophaeus
MGP_SPRETEiJ_G0029183Zc3hc19646.313ENSMAMG00000010691zc3hc19743.340Mastacembelus_armatus
MGP_SPRETEiJ_G0029183Zc3hc19345.593ENSMZEG00005007142zc3hc19542.191Maylandia_zebra
MGP_SPRETEiJ_G0029183Zc3hc19660.861ENSMGAG00000002977ZC3HC19761.270Meleagris_gallopavo
MGP_SPRETEiJ_G0029183Zc3hc18283.575ENSMAUG00000017032Zc3hc19283.575Mesocricetus_auratus
MGP_SPRETEiJ_G0029183Zc3hc110084.661ENSMICG00000009167ZC3HC110084.661Microcebus_murinus
MGP_SPRETEiJ_G0029183Zc3hc110088.224ENSMOCG00000015239Zc3hc110088.224Microtus_ochrogaster
MGP_SPRETEiJ_G0029183Zc3hc17851.452ENSMMOG00000002204zc3hc19942.418Mola_mola
MGP_SPRETEiJ_G0029183Zc3hc110061.923ENSMODG00000014630ZC3HC110061.923Monodelphis_domestica
MGP_SPRETEiJ_G0029183Zc3hc19345.584ENSMALG00000014447zc3hc19643.825Monopterus_albus
MGP_SPRETEiJ_G0029183Zc3hc110096.732MGP_CAROLIEiJ_G0028183Zc3hc110096.732Mus_caroli
MGP_SPRETEiJ_G0029183Zc3hc110099.302ENSMUSG00000039130Zc3hc110099.302Mus_musculus
MGP_SPRETEiJ_G0029183Zc3hc110087.582MGP_PahariEiJ_G0021941Zc3hc110087.582Mus_pahari
MGP_SPRETEiJ_G0029183Zc3hc19584.760ENSMPUG00000005297ZC3HC19584.760Mustela_putorius_furo
MGP_SPRETEiJ_G0029183Zc3hc16778.235ENSMLUG00000029228-9978.235Myotis_lucifugus
MGP_SPRETEiJ_G0029183Zc3hc110083.366ENSMLUG00000000063-10083.366Myotis_lucifugus
MGP_SPRETEiJ_G0029183Zc3hc110086.056ENSNGAG00000019014Zc3hc110086.056Nannospalax_galili
MGP_SPRETEiJ_G0029183Zc3hc19345.897ENSNBRG00000004577zc3hc19542.276Neolamprologus_brichardi
MGP_SPRETEiJ_G0029183Zc3hc19984.543ENSNLEG00000012698ZC3HC19984.543Nomascus_leucogenys
MGP_SPRETEiJ_G0029183Zc3hc110074.701ENSMEUG00000011023ZC3HC110074.701Notamacropus_eugenii
MGP_SPRETEiJ_G0029183Zc3hc17676.744ENSOPRG00000007867-6876.744Ochotona_princeps
MGP_SPRETEiJ_G0029183Zc3hc110080.279ENSODEG00000014604ZC3HC110080.278Octodon_degus
MGP_SPRETEiJ_G0029183Zc3hc19443.205ENSONIG00000011644zc3hc19542.799Oreochromis_niloticus
MGP_SPRETEiJ_G0029183Zc3hc19066.810ENSOANG00000011460ZC3HC110066.810Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0029183Zc3hc110080.396ENSOCUG00000017137ZC3HC110080.396Oryctolagus_cuniculus
MGP_SPRETEiJ_G0029183Zc3hc19447.590ENSORLG00000014409zc3hc19543.725Oryzias_latipes
MGP_SPRETEiJ_G0029183Zc3hc19447.289ENSORLG00020015874zc3hc19543.522Oryzias_latipes_hni
MGP_SPRETEiJ_G0029183Zc3hc19147.975ENSORLG00015014641zc3hc19543.320Oryzias_latipes_hsok
MGP_SPRETEiJ_G0029183Zc3hc19543.867ENSOMEG00000020604zc3hc19544.239Oryzias_melastigma
MGP_SPRETEiJ_G0029183Zc3hc19543.867ENSOMEG00000000215zc3hc19544.239Oryzias_melastigma
MGP_SPRETEiJ_G0029183Zc3hc110078.486ENSOGAG00000026193ZC3HC110078.486Otolemur_garnettii
MGP_SPRETEiJ_G0029183Zc3hc110084.554ENSOARG00000004907ZC3HC19984.554Ovis_aries
MGP_SPRETEiJ_G0029183Zc3hc19985.542ENSPPAG00000043172ZC3HC19985.542Pan_paniscus
MGP_SPRETEiJ_G0029183Zc3hc19984.075ENSPPRG00000001004ZC3HC19984.075Panthera_pardus
MGP_SPRETEiJ_G0029183Zc3hc110084.064ENSPTIG00000007823ZC3HC110084.064Panthera_tigris_altaica
MGP_SPRETEiJ_G0029183Zc3hc19985.341ENSPTRG00000019685ZC3HC19985.341Pan_troglodytes
MGP_SPRETEiJ_G0029183Zc3hc110085.615ENSPANG00000014229ZC3HC110085.615Papio_anubis
MGP_SPRETEiJ_G0029183Zc3hc19550.625ENSPKIG00000007172zc3hc19646.830Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0029183Zc3hc19263.087ENSPSIG00000016646ZC3HC19459.329Pelodiscus_sinensis
MGP_SPRETEiJ_G0029183Zc3hc19050.202ENSPMGG00000003548zc3hc19642.523Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0029183Zc3hc110089.070ENSPEMG00000000514Zc3hc110089.070Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0029183Zc3hc19772.746ENSPCIG00000020619ZC3HC110075.321Phascolarctos_cinereus
MGP_SPRETEiJ_G0029183Zc3hc19545.646ENSPFOG00000003466zc3hc19642.715Poecilia_formosa
MGP_SPRETEiJ_G0029183Zc3hc19545.345ENSPLAG00000022211zc3hc19642.515Poecilia_latipinna
MGP_SPRETEiJ_G0029183Zc3hc19545.646ENSPMEG00000001458zc3hc19642.715Poecilia_mexicana
MGP_SPRETEiJ_G0029183Zc3hc19642.886ENSPREG00000004004zc3hc19642.515Poecilia_reticulata
MGP_SPRETEiJ_G0029183Zc3hc19977.400ENSPPYG00000017998ZC3HC19977.400Pongo_abelii
MGP_SPRETEiJ_G0029183Zc3hc19280.217ENSPCAG00000001182ZC3HC110080.217Procavia_capensis
MGP_SPRETEiJ_G0029183Zc3hc110085.060ENSPCOG00000017354ZC3HC110085.060Propithecus_coquereli
MGP_SPRETEiJ_G0029183Zc3hc110080.080ENSPVAG00000003195ZC3HC110080.279Pteropus_vampyrus
MGP_SPRETEiJ_G0029183Zc3hc19345.593ENSPNYG00000020692zc3hc19542.191Pundamilia_nyererei
MGP_SPRETEiJ_G0029183Zc3hc19344.748ENSPNAG00000020746zc3hc19543.697Pygocentrus_nattereri
MGP_SPRETEiJ_G0029183Zc3hc110092.629ENSRNOG00000010154Zc3hc110092.629Rattus_norvegicus
MGP_SPRETEiJ_G0029183Zc3hc19086.976ENSRBIG00000029409ZC3HC110087.173Rhinopithecus_bieti
MGP_SPRETEiJ_G0029183Zc3hc110085.458ENSRROG00000041831ZC3HC110085.458Rhinopithecus_roxellana
MGP_SPRETEiJ_G0029183Zc3hc110067.331ENSSBOG00000032787ZC3HC19985.854Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0029183Zc3hc19275.054ENSSHAG00000002529ZC3HC110075.054Sarcophilus_harrisii
MGP_SPRETEiJ_G0029183Zc3hc19649.180ENSSFOG00015003667zc3hc19248.875Scleropages_formosus
MGP_SPRETEiJ_G0029183Zc3hc19541.767ENSSMAG00000000647zc3hc18641.884Scophthalmus_maximus
MGP_SPRETEiJ_G0029183Zc3hc19646.588ENSSDUG00000004241zc3hc19543.713Seriola_dumerili
MGP_SPRETEiJ_G0029183Zc3hc19646.291ENSSLDG00000025056zc3hc19543.513Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0029183Zc3hc19974.451ENSSARG00000012013ZC3HC19974.451Sorex_araneus
MGP_SPRETEiJ_G0029183Zc3hc18462.690ENSSPUG00000000778ZC3HC18662.690Sphenodon_punctatus
MGP_SPRETEiJ_G0029183Zc3hc19545.970ENSSPAG00000020041zc3hc19643.600Stegastes_partitus
MGP_SPRETEiJ_G0029183Zc3hc110084.462ENSSSCG00000016565ZC3HC110084.576Sus_scrofa
MGP_SPRETEiJ_G0029183Zc3hc19542.566ENSTRUG00000020077zc3hc19542.363Takifugu_rubripes
MGP_SPRETEiJ_G0029183Zc3hc19346.914ENSTNIG00000007585zc3hc19941.942Tetraodon_nigroviridis
MGP_SPRETEiJ_G0029183Zc3hc19974.900ENSTBEG00000005216ZC3HC19974.900Tupaia_belangeri
MGP_SPRETEiJ_G0029183Zc3hc19585.417ENSTTRG00000008458ZC3HC110085.417Tursiops_truncatus
MGP_SPRETEiJ_G0029183Zc3hc110085.657ENSUAMG00000020249ZC3HC110085.657Ursus_americanus
MGP_SPRETEiJ_G0029183Zc3hc110085.060ENSUMAG00000009268ZC3HC110085.060Ursus_maritimus
MGP_SPRETEiJ_G0029183Zc3hc19087.755ENSVPAG00000010846ZC3HC17787.755Vicugna_pacos
MGP_SPRETEiJ_G0029183Zc3hc19686.042ENSVVUG00000012386ZC3HC19986.042Vulpes_vulpes
MGP_SPRETEiJ_G0029183Zc3hc19252.350ENSXETG00000033900zc3hc19652.350Xenopus_tropicalis
MGP_SPRETEiJ_G0029183Zc3hc19642.169ENSXCOG00000013570zc3hc19743.073Xiphophorus_couchianus
MGP_SPRETEiJ_G0029183Zc3hc18844.156ENSXMAG00000010979zc3hc19543.750Xiphophorus_maculatus

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