EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0029346 (Gene tree)
Gene ID: -
Gene Symbol: Repin1
Alias: AP4|E430037F08Rik|Zfp464
Full Name: replication initiator 1
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 5206 bases
Position: chr6:46198764-46203969
Accession: 1889817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0076533	zf-C2H2	PF00096.26	9.6e-68	1	10
MGP_SPRETEiJ_P0076533	zf-C2H2	PF00096.26	9.6e-68	2	10
MGP_SPRETEiJ_P0076533	zf-C2H2	PF00096.26	9.6e-68	3	10
MGP_SPRETEiJ_P0076533	zf-C2H2	PF00096.26	9.6e-68	4	10
MGP_SPRETEiJ_P0076533	zf-C2H2	PF00096.26	9.6e-68	5	10
MGP_SPRETEiJ_P0076533	zf-C2H2	PF00096.26	9.6e-68	6	10
MGP_SPRETEiJ_P0076533	zf-C2H2	PF00096.26	9.6e-68	7	10
MGP_SPRETEiJ_P0076533	zf-C2H2	PF00096.26	9.6e-68	8	10
MGP_SPRETEiJ_P0076533	zf-C2H2	PF00096.26	9.6e-68	9	10
MGP_SPRETEiJ_P0076533	zf-C2H2	PF00096.26	9.6e-68	10	10
MGP_SPRETEiJ_P0076534	zf-C2H2	PF00096.26	9.6e-68	1	10
MGP_SPRETEiJ_P0076534	zf-C2H2	PF00096.26	9.6e-68	2	10
MGP_SPRETEiJ_P0076534	zf-C2H2	PF00096.26	9.6e-68	3	10
MGP_SPRETEiJ_P0076534	zf-C2H2	PF00096.26	9.6e-68	4	10
MGP_SPRETEiJ_P0076534	zf-C2H2	PF00096.26	9.6e-68	5	10
MGP_SPRETEiJ_P0076534	zf-C2H2	PF00096.26	9.6e-68	6	10
MGP_SPRETEiJ_P0076534	zf-C2H2	PF00096.26	9.6e-68	7	10
MGP_SPRETEiJ_P0076534	zf-C2H2	PF00096.26	9.6e-68	8	10
MGP_SPRETEiJ_P0076534	zf-C2H2	PF00096.26	9.6e-68	9	10
MGP_SPRETEiJ_P0076534	zf-C2H2	PF00096.26	9.6e-68	10	10
MGP_SPRETEiJ_P0076536	zf-C2H2	PF00096.26	4.7e-67	1	10
MGP_SPRETEiJ_P0076536	zf-C2H2	PF00096.26	4.7e-67	2	10
MGP_SPRETEiJ_P0076536	zf-C2H2	PF00096.26	4.7e-67	3	10
MGP_SPRETEiJ_P0076536	zf-C2H2	PF00096.26	4.7e-67	4	10
MGP_SPRETEiJ_P0076536	zf-C2H2	PF00096.26	4.7e-67	5	10
MGP_SPRETEiJ_P0076536	zf-C2H2	PF00096.26	4.7e-67	6	10
MGP_SPRETEiJ_P0076536	zf-C2H2	PF00096.26	4.7e-67	7	10
MGP_SPRETEiJ_P0076536	zf-C2H2	PF00096.26	4.7e-67	8	10
MGP_SPRETEiJ_P0076536	zf-C2H2	PF00096.26	4.7e-67	9	10
MGP_SPRETEiJ_P0076536	zf-C2H2	PF00096.26	4.7e-67	10	10
MGP_SPRETEiJ_P0076537	zf-C2H2	PF00096.26	5.2e-67	1	10
MGP_SPRETEiJ_P0076537	zf-C2H2	PF00096.26	5.2e-67	2	10
MGP_SPRETEiJ_P0076537	zf-C2H2	PF00096.26	5.2e-67	3	10
MGP_SPRETEiJ_P0076537	zf-C2H2	PF00096.26	5.2e-67	4	10
MGP_SPRETEiJ_P0076537	zf-C2H2	PF00096.26	5.2e-67	5	10
MGP_SPRETEiJ_P0076537	zf-C2H2	PF00096.26	5.2e-67	6	10
MGP_SPRETEiJ_P0076537	zf-C2H2	PF00096.26	5.2e-67	7	10
MGP_SPRETEiJ_P0076537	zf-C2H2	PF00096.26	5.2e-67	8	10
MGP_SPRETEiJ_P0076537	zf-C2H2	PF00096.26	5.2e-67	9	10
MGP_SPRETEiJ_P0076537	zf-C2H2	PF00096.26	5.2e-67	10	10
MGP_SPRETEiJ_P0076535	zf-C2H2	PF00096.26	2.7e-32	1	5
MGP_SPRETEiJ_P0076535	zf-C2H2	PF00096.26	2.7e-32	2	5
MGP_SPRETEiJ_P0076535	zf-C2H2	PF00096.26	2.7e-32	3	5
MGP_SPRETEiJ_P0076535	zf-C2H2	PF00096.26	2.7e-32	4	5
MGP_SPRETEiJ_P0076535	zf-C2H2	PF00096.26	2.7e-32	5	5
MGP_SPRETEiJ_P0076535	zf-met	PF12874.7	6e-07	1	1
MGP_SPRETEiJ_P0076533	zf-met	PF12874.7	2.3e-06	1	1
MGP_SPRETEiJ_P0076534	zf-met	PF12874.7	2.3e-06	1	1
MGP_SPRETEiJ_P0076536	zf-met	PF12874.7	9.5e-06	1	1
MGP_SPRETEiJ_P0076537	zf-met	PF12874.7	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0076541	-	993	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0076533	-	3152	-	MGP_SPRETEiJ_P0076533	545 (aa)	-	-
MGP_SPRETEiJ_T0076534	-	2966	-	MGP_SPRETEiJ_P0076534	545 (aa)	-	-
MGP_SPRETEiJ_T0076535	-	1265	-	MGP_SPRETEiJ_P0076535	360 (aa)	-	-
MGP_SPRETEiJ_T0076536	-	3145	-	MGP_SPRETEiJ_P0076536	598 (aa)	-	-
MGP_SPRETEiJ_T0076537	-	3064	-	MGP_SPRETEiJ_P0076537	601 (aa)	-	-
MGP_SPRETEiJ_T0076538	-	655	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0029346's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0029346's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0029346	Repin1	91	34.307	MGP_SPRETEiJ_G0030453	Zfp574	97	34.336
MGP_SPRETEiJ_G0029346	Repin1	92	42.424	MGP_SPRETEiJ_G0032697	Zfp1	63	42.424
MGP_SPRETEiJ_G0029346	Repin1	93	33.532	MGP_SPRETEiJ_G0019560	Zfp748	92	33.135
MGP_SPRETEiJ_G0029346	Repin1	93	38.614	MGP_SPRETEiJ_G0027723	Zbtb17	63	38.614
MGP_SPRETEiJ_G0029346	Repin1	92	37.079	MGP_SPRETEiJ_G0017272	Zfp867	80	37.079
MGP_SPRETEiJ_G0029346	Repin1	92	37.736	MGP_SPRETEiJ_G0030421	-	99	37.736
MGP_SPRETEiJ_G0029346	Repin1	94	33.810	MGP_SPRETEiJ_G0030420	Zfp108	75	35.610
MGP_SPRETEiJ_G0029346	Repin1	97	38.462	MGP_SPRETEiJ_G0030423	Zfp94	74	43.114
MGP_SPRETEiJ_G0029346	Repin1	92	36.429	MGP_SPRETEiJ_G0030422	Zfp61	52	36.429
MGP_SPRETEiJ_G0029346	Repin1	91	30.877	MGP_SPRETEiJ_G0031639	Zfp646	97	30.877
MGP_SPRETEiJ_G0029346	Repin1	93	46.711	MGP_SPRETEiJ_G0030586	Zfp420	98	46.711
MGP_SPRETEiJ_G0029346	Repin1	92	40.864	MGP_SPRETEiJ_G0030709	-	78	55.263
MGP_SPRETEiJ_G0029346	Repin1	100	47.895	MGP_SPRETEiJ_G0029809	Zfp637	84	53.704
MGP_SPRETEiJ_G0029346	Repin1	94	42.083	MGP_SPRETEiJ_G0025181	Zfp661	80	42.083
MGP_SPRETEiJ_G0029346	Repin1	93	39.655	MGP_SPRETEiJ_G0030415	Zfp112	52	39.655
MGP_SPRETEiJ_G0029346	Repin1	98	46.591	MGP_SPRETEiJ_G0030416	Zfp235	67	34.743
MGP_SPRETEiJ_G0029346	Repin1	93	41.477	MGP_SPRETEiJ_G0030417	Zfp114	67	36.154
MGP_SPRETEiJ_G0029346	Repin1	95	47.857	MGP_SPRETEiJ_G0019129	Zkscan4	57	47.857
MGP_SPRETEiJ_G0029346	Repin1	93	36.556	MGP_SPRETEiJ_G0030713	Zfp715	74	63.415
MGP_SPRETEiJ_G0029346	Repin1	99	41.667	MGP_SPRETEiJ_G0023360	Zfp236	96	41.667
MGP_SPRETEiJ_G0029346	Repin1	92	33.643	MGP_SPRETEiJ_G0019544	Zfp759	91	34.568
MGP_SPRETEiJ_G0029346	Repin1	95	42.604	MGP_SPRETEiJ_G0019543	-	73	42.604
MGP_SPRETEiJ_G0029346	Repin1	98	41.250	MGP_SPRETEiJ_G0017856	Zfp652	70	41.250
MGP_SPRETEiJ_G0029346	Repin1	92	44.828	MGP_SPRETEiJ_G0020852	Zfp251	69	40.199
MGP_SPRETEiJ_G0029346	Repin1	90	46.584	MGP_SPRETEiJ_G0025835	Mynn	51	44.503
MGP_SPRETEiJ_G0029346	Repin1	93	36.522	MGP_SPRETEiJ_G0022052	Zfp945	79	36.522
MGP_SPRETEiJ_G0029346	Repin1	91	45.550	MGP_SPRETEiJ_G0030188	Zfp628	63	45.545
MGP_SPRETEiJ_G0029346	Repin1	92	42.069	MGP_SPRETEiJ_G0029467	Prdm5	68	42.361
MGP_SPRETEiJ_G0029346	Repin1	97	32.716	MGP_SPRETEiJ_G0025644	Zfp64	72	40.659
MGP_SPRETEiJ_G0029346	Repin1	92	31.970	MGP_SPRETEiJ_G0030196	-	84	32.090
MGP_SPRETEiJ_G0029346	Repin1	55	34.112	MGP_SPRETEiJ_G0030199	Zfp784	74	38.150
MGP_SPRETEiJ_G0029346	Repin1	91	42.793	MGP_SPRETEiJ_G0031613	-	84	43.182
MGP_SPRETEiJ_G0029346	Repin1	88	45.455	MGP_SPRETEiJ_G0031612	Zfp768	51	47.090
MGP_SPRETEiJ_G0029346	Repin1	91	42.793	MGP_SPRETEiJ_G0031614	-	84	43.182
MGP_SPRETEiJ_G0029346	Repin1	91	38.889	MGP_SPRETEiJ_G0028173	Zbtb49	60	47.222
MGP_SPRETEiJ_G0029346	Repin1	91	35.426	MGP_SPRETEiJ_G0017233	Zfp672	92	40.789
MGP_SPRETEiJ_G0029346	Repin1	92	36.705	MGP_SPRETEiJ_G0022057	Zscan10	75	36.705
MGP_SPRETEiJ_G0029346	Repin1	88	30.103	MGP_SPRETEiJ_G0032539	Zfp319	87	31.818
MGP_SPRETEiJ_G0029346	Repin1	98	33.933	MGP_SPRETEiJ_G0030524	Zfp59	87	33.933
MGP_SPRETEiJ_G0029346	Repin1	93	34.985	MGP_SPRETEiJ_G0030525	-	83	50.000
MGP_SPRETEiJ_G0029346	Repin1	92	35.735	MGP_SPRETEiJ_G0030526	-	93	32.331

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0029346	Repin1	100	84.461	ENSCHIG00000019982	REPIN1	100	84.699	Capra_hircus
MGP_SPRETEiJ_G0029346	Repin1	100	90.876	ENSCGRG00001017330	Repin1	99	88.982	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0029346	Repin1	100	89.781	ENSCGRG00000015472	Repin1	99	88.176	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0029346	Repin1	100	91.257	ENSMAUG00000005776	Repin1	100	91.257	Mesocricetus_auratus
MGP_SPRETEiJ_G0029346	Repin1	100	92.153	ENSMOCG00000021124	Repin1	100	91.542	Microtus_ochrogaster
MGP_SPRETEiJ_G0029346	Repin1	93	61.176	ENSMODG00000003616	-	92	60.294	Monodelphis_domestica
MGP_SPRETEiJ_G0029346	Repin1	100	99.450	MGP_CAROLIEiJ_G0028343	Repin1	100	99.450	Mus_caroli
MGP_SPRETEiJ_G0029346	Repin1	100	99.817	ENSMUSG00000052751	Repin1	100	99.817	Mus_musculus
MGP_SPRETEiJ_G0029346	Repin1	100	97.619	MGP_PahariEiJ_G0022097	Repin1	100	97.619	Mus_pahari
MGP_SPRETEiJ_G0029346	Repin1	100	92.518	ENSPEMG00000000870	Repin1	100	90.728	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0029346	Repin1	100	95.803	ENSRNOG00000008239	Repin1	100	95.033	Rattus_norvegicus