EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0029368 (Gene tree)
Gene ID: -
Gene Symbol: Tra2a
Alias: 1500010G04Rik|G430041M01Rik|mAWMS1
Full Name: transformer 2 alpha
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 19934 bases
Position: chr6:46879661-46899594
Accession: 1933972
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0076624	RRM_1	PF00076.22	2.8e-19	1	1
MGP_SPRETEiJ_P0076627	RRM_1	PF00076.22	2.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0076628	-	3790	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0076624	-	1779	-	MGP_SPRETEiJ_P0076624	280 (aa)	-	UPI000050316D
MGP_SPRETEiJ_T0076625	-	2092	-	MGP_SPRETEiJ_P0076625	59 (aa)	-	UPI00001F3BCD
MGP_SPRETEiJ_T0076626	-	3037	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0076627	-	1801	-	MGP_SPRETEiJ_P0076627	282 (aa)	-	UPI00001F3BCA

Gene Model

Click here to download MGP_SPRETEiJ_G0029368's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0029368's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0029368	Tra2a	59	37.097	MGP_SPRETEiJ_G0027258	Elavl4	72	35.821

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0029368	Tra2a	100	98.592	ENSG00000164548	TRA2A	100	98.907	Homo_sapiens
MGP_SPRETEiJ_G0029368	Tra2a	90	69.597	ENSAPOG00000017425	tra2a	90	74.359	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0029368	Tra2a	95	96.337	ENSAMEG00000003501	TRA2A	84	96.337	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0029368	Tra2a	55	86.364	ENSACIG00000001333	tra2a	79	86.364	Amphilophus_citrinellus
MGP_SPRETEiJ_G0029368	Tra2a	90	70.330	ENSAOCG00000015445	tra2a	90	75.092	Amphiprion_ocellaris
MGP_SPRETEiJ_G0029368	Tra2a	90	70.330	ENSAPEG00000018557	tra2a	90	75.092	Amphiprion_percula
MGP_SPRETEiJ_G0029368	Tra2a	90	72.161	ENSATEG00000000671	tra2a	90	76.557	Anabas_testudineus
MGP_SPRETEiJ_G0029368	Tra2a	86	89.796	ENSAPLG00000013689	TRA2A	90	90.612	Anas_platyrhynchos
MGP_SPRETEiJ_G0029368	Tra2a	100	95.423	ENSACAG00000013502	TRA2A	100	95.423	Anolis_carolinensis
MGP_SPRETEiJ_G0029368	Tra2a	90	76.190	ENSACLG00000024845	tra2a	90	78.022	Astatotilapia_calliptera
MGP_SPRETEiJ_G0029368	Tra2a	61	90.751	ENSAMXG00000005553	tra2a	98	86.420	Astyanax_mexicanus
MGP_SPRETEiJ_G0029368	Tra2a	100	98.239	ENSBTAG00000012622	TRA2A	100	98.239	Bos_taurus
MGP_SPRETEiJ_G0029368	Tra2a	94	96.617	ENSCJAG00000045802	-	100	96.617	Callithrix_jacchus
MGP_SPRETEiJ_G0029368	Tra2a	100	98.592	ENSCJAG00000001509	-	100	98.592	Callithrix_jacchus
MGP_SPRETEiJ_G0029368	Tra2a	99	98.221	ENSCAFG00000002788	TRA2A	100	98.221	Canis_familiaris
MGP_SPRETEiJ_G0029368	Tra2a	90	97.266	ENSCAFG00020002745	TRA2A	95	97.266	Canis_lupus_dingo
MGP_SPRETEiJ_G0029368	Tra2a	100	98.592	ENSTSYG00000000388	TRA2A	100	98.907	Carlito_syrichta
MGP_SPRETEiJ_G0029368	Tra2a	86	83.607	ENSCAPG00000017377	TRA2A	87	84.362	Cavia_aperea
MGP_SPRETEiJ_G0029368	Tra2a	100	98.592	ENSCPOG00000010739	TRA2A	100	98.592	Cavia_porcellus
MGP_SPRETEiJ_G0029368	Tra2a	100	98.592	ENSCCAG00000019576	TRA2A	100	98.907	Cebus_capucinus
MGP_SPRETEiJ_G0029368	Tra2a	100	98.592	ENSCATG00000041219	TRA2A	100	98.907	Cercocebus_atys
MGP_SPRETEiJ_G0029368	Tra2a	100	98.592	ENSCLAG00000007917	TRA2A	100	98.592	Chinchilla_lanigera
MGP_SPRETEiJ_G0029368	Tra2a	99	98.577	ENSCSAG00000014051	TRA2A	99	98.577	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0029368	Tra2a	100	98.239	ENSCHOG00000001130	TRA2A	100	98.239	Choloepus_hoffmanni
MGP_SPRETEiJ_G0029368	Tra2a	100	95.105	ENSCPBG00000022466	TRA2A	100	95.105	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0029368	Tra2a	100	98.592	ENSCANG00000031292	TRA2A	100	98.907	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0029368	Tra2a	100	100.000	ENSCGRG00001019980	Tra2a	100	100.000	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0029368	Tra2a	96	100.000	ENSCGRG00000006087	Tra2a	100	100.000	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0029368	Tra2a	90	73.162	ENSCSEG00000012193	tra2a	90	73.529	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0029368	Tra2a	90	77.206	ENSDARG00000007863	tra2a	87	80.925	Danio_rerio
MGP_SPRETEiJ_G0029368	Tra2a	100	98.239	ENSDNOG00000039446	TRA2A	100	98.239	Dasypus_novemcinctus
MGP_SPRETEiJ_G0029368	Tra2a	100	99.291	ENSDORG00000009361	Tra2a	100	99.291	Dipodomys_ordii
MGP_SPRETEiJ_G0029368	Tra2a	100	82.230	ENSETEG00000007250	TRA2A	100	82.230	Echinops_telfairi
MGP_SPRETEiJ_G0029368	Tra2a	100	98.239	ENSEASG00005022002	TRA2A	100	98.239	Equus_asinus_asinus
MGP_SPRETEiJ_G0029368	Tra2a	100	98.239	ENSECAG00000011508	TRA2A	100	98.239	Equus_caballus
MGP_SPRETEiJ_G0029368	Tra2a	100	97.535	ENSEEUG00000015674	TRA2A	100	97.535	Erinaceus_europaeus
MGP_SPRETEiJ_G0029368	Tra2a	76	75.214	ENSELUG00000005846	tra2a	91	70.034	Esox_lucius
MGP_SPRETEiJ_G0029368	Tra2a	100	98.239	ENSFCAG00000005361	TRA2A	100	98.239	Felis_catus
MGP_SPRETEiJ_G0029368	Tra2a	96	93.382	ENSFALG00000009605	TRA2A	100	93.382	Ficedula_albicollis
MGP_SPRETEiJ_G0029368	Tra2a	100	98.592	ENSFDAG00000004949	TRA2A	100	98.592	Fukomys_damarensis
MGP_SPRETEiJ_G0029368	Tra2a	90	70.909	ENSGMOG00000013740	tra2a	91	71.273	Gadus_morhua
MGP_SPRETEiJ_G0029368	Tra2a	90	90.272	ENSGALG00000010973	TRA2A	90	91.051	Gallus_gallus
MGP_SPRETEiJ_G0029368	Tra2a	90	76.172	ENSGACG00000006878	tra2a	89	76.172	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0029368	Tra2a	100	94.406	ENSGAGG00000005793	TRA2A	100	94.406	Gopherus_agassizii
MGP_SPRETEiJ_G0029368	Tra2a	100	98.592	ENSGGOG00000009053	TRA2A	100	98.592	Gorilla_gorilla
MGP_SPRETEiJ_G0029368	Tra2a	90	76.923	ENSHBUG00000018234	tra2a	90	78.755	Haplochromis_burtoni
MGP_SPRETEiJ_G0029368	Tra2a	100	98.592	ENSHGLG00000012168	TRA2A	100	98.592	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0029368	Tra2a	100	98.592	ENSHGLG00100014577	TRA2A	100	98.592	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0029368	Tra2a	62	61.979	ENSHCOG00000006320	tra2a	95	61.257	Hippocampus_comes
MGP_SPRETEiJ_G0029368	Tra2a	65	64.583	ENSHCOG00000006314	tra2a	86	63.372	Hippocampus_comes
MGP_SPRETEiJ_G0029368	Tra2a	100	98.592	ENSSTOG00000012073	TRA2A	100	98.592	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0029368	Tra2a	100	99.291	ENSJJAG00000022787	Tra2a	100	99.291	Jaculus_jaculus
MGP_SPRETEiJ_G0029368	Tra2a	86	73.946	ENSLBEG00000005297	tra2a	63	78.723	Labrus_bergylta
MGP_SPRETEiJ_G0029368	Tra2a	90	85.098	ENSLACG00000014765	TRA2A	90	86.667	Latimeria_chalumnae
MGP_SPRETEiJ_G0029368	Tra2a	90	75.458	ENSLOCG00000011615	-	90	75.824	Lepisosteus_oculatus
MGP_SPRETEiJ_G0029368	Tra2a	100	98.944	ENSLAFG00000006598	TRA2A	100	98.944	Loxodonta_africana
MGP_SPRETEiJ_G0029368	Tra2a	100	98.592	ENSMFAG00000043211	TRA2A	100	98.907	Macaca_fascicularis
MGP_SPRETEiJ_G0029368	Tra2a	100	98.592	ENSMMUG00000006286	TRA2A	100	98.592	Macaca_mulatta
MGP_SPRETEiJ_G0029368	Tra2a	100	98.592	ENSMNEG00000040670	TRA2A	100	98.907	Macaca_nemestrina
MGP_SPRETEiJ_G0029368	Tra2a	100	98.592	ENSMLEG00000032154	TRA2A	100	98.907	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0029368	Tra2a	76	78.112	ENSMAMG00000008575	tra2a	90	80.603	Mastacembelus_armatus
MGP_SPRETEiJ_G0029368	Tra2a	90	76.190	ENSMZEG00005009142	tra2a	90	78.022	Maylandia_zebra
MGP_SPRETEiJ_G0029368	Tra2a	90	87.549	ENSMGAG00000010514	TRA2A	89	90.612	Meleagris_gallopavo
MGP_SPRETEiJ_G0029368	Tra2a	100	98.239	ENSMICG00000043639	-	100	98.907	Microcebus_murinus
MGP_SPRETEiJ_G0029368	Tra2a	100	77.305	ENSMICG00000036849	-	88	76.680	Microcebus_murinus
MGP_SPRETEiJ_G0029368	Tra2a	70	81.910	ENSMOCG00000006467	-	97	83.417	Microtus_ochrogaster
MGP_SPRETEiJ_G0029368	Tra2a	63	89.944	ENSMOCG00000010249	-	88	90.909	Microtus_ochrogaster
MGP_SPRETEiJ_G0029368	Tra2a	87	78.629	ENSMMOG00000020174	tra2a	83	78.512	Mola_mola
MGP_SPRETEiJ_G0029368	Tra2a	100	96.831	ENSMODG00000000807	TRA2A	100	96.831	Monodelphis_domestica
MGP_SPRETEiJ_G0029368	Tra2a	85	76.154	ENSMALG00000020875	tra2a	90	76.642	Monopterus_albus
MGP_SPRETEiJ_G0029368	Tra2a	100	100.000	ENSMUSG00000029817	Tra2a	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0029368	Tra2a	100	99.645	MGP_PahariEiJ_G0022115	Tra2a	100	99.645	Mus_pahari
MGP_SPRETEiJ_G0029368	Tra2a	100	97.887	ENSMPUG00000013480	TRA2A	100	97.887	Mustela_putorius_furo
MGP_SPRETEiJ_G0029368	Tra2a	100	97.887	ENSMLUG00000013972	TRA2A	100	97.887	Myotis_lucifugus
MGP_SPRETEiJ_G0029368	Tra2a	100	98.582	ENSNGAG00000023805	Tra2a	100	98.582	Nannospalax_galili
MGP_SPRETEiJ_G0029368	Tra2a	55	89.610	ENSNBRG00000005992	tra2a	73	89.610	Neolamprologus_brichardi
MGP_SPRETEiJ_G0029368	Tra2a	100	98.592	ENSNLEG00000014794	TRA2A	100	98.907	Nomascus_leucogenys
MGP_SPRETEiJ_G0029368	Tra2a	65	71.823	ENSNLEG00000029659	-	88	75.325	Nomascus_leucogenys
MGP_SPRETEiJ_G0029368	Tra2a	100	96.466	ENSMEUG00000001202	TRA2A	100	96.466	Notamacropus_eugenii
MGP_SPRETEiJ_G0029368	Tra2a	100	97.183	ENSOPRG00000007606	TRA2A	100	97.183	Ochotona_princeps
MGP_SPRETEiJ_G0029368	Tra2a	100	98.592	ENSODEG00000008335	TRA2A	100	98.592	Octodon_degus
MGP_SPRETEiJ_G0029368	Tra2a	90	76.087	ENSONIG00000004503	tra2a	90	77.899	Oreochromis_niloticus
MGP_SPRETEiJ_G0029368	Tra2a	90	86.822	ENSOANG00000014202	TRA2A	90	86.822	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0029368	Tra2a	100	98.239	ENSOCUG00000024139	TRA2A	100	98.239	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0029368	Tra2a	83	69.264	ENSORLG00000022191	tra2a	60	73.373	Oryzias_latipes
MGP_SPRETEiJ_G0029368	Tra2a	83	68.831	ENSORLG00020003490	tra2a	60	72.781	Oryzias_latipes_hni
MGP_SPRETEiJ_G0029368	Tra2a	83	68.398	ENSORLG00015015485	tra2a	60	72.189	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0029368	Tra2a	83	67.532	ENSOMEG00000017864	tra2a	60	71.006	Oryzias_melastigma
MGP_SPRETEiJ_G0029368	Tra2a	99	95.745	ENSOGAG00000009733	TRA2A	99	95.745	Otolemur_garnettii
MGP_SPRETEiJ_G0029368	Tra2a	100	91.519	ENSOARG00000002323	-	100	91.519	Ovis_aries
MGP_SPRETEiJ_G0029368	Tra2a	100	97.183	ENSOARG00000013147	TRA2A	100	97.183	Ovis_aries
MGP_SPRETEiJ_G0029368	Tra2a	99	98.577	ENSPPAG00000034382	TRA2A	99	98.889	Pan_paniscus
MGP_SPRETEiJ_G0029368	Tra2a	100	98.239	ENSPPRG00000015216	TRA2A	100	98.239	Panthera_pardus
MGP_SPRETEiJ_G0029368	Tra2a	100	98.239	ENSPTIG00000021114	TRA2A	100	98.239	Panthera_tigris_altaica
MGP_SPRETEiJ_G0029368	Tra2a	100	98.592	ENSPTRG00000046098	-	100	98.592	Pan_troglodytes
MGP_SPRETEiJ_G0029368	Tra2a	100	98.592	ENSPTRG00000018988	TRA2A	100	98.907	Pan_troglodytes
MGP_SPRETEiJ_G0029368	Tra2a	100	98.592	ENSPANG00000014541	TRA2A	100	98.592	Papio_anubis
MGP_SPRETEiJ_G0029368	Tra2a	90	76.384	ENSPKIG00000012298	tra2a	90	76.384	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0029368	Tra2a	89	91.633	ENSPSIG00000014993	TRA2A	90	92.032	Pelodiscus_sinensis
MGP_SPRETEiJ_G0029368	Tra2a	100	99.645	ENSPEMG00000008564	-	100	99.645	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0029368	Tra2a	63	69.101	ENSPMAG00000007947	tra2a	59	68.862	Petromyzon_marinus
MGP_SPRETEiJ_G0029368	Tra2a	100	96.831	ENSPCIG00000007917	TRA2A	100	96.831	Phascolarctos_cinereus
MGP_SPRETEiJ_G0029368	Tra2a	100	98.592	ENSPPYG00000017728	TRA2A	100	98.592	Pongo_abelii
MGP_SPRETEiJ_G0029368	Tra2a	99	98.221	ENSPCAG00000004148	TRA2A	100	98.221	Procavia_capensis
MGP_SPRETEiJ_G0029368	Tra2a	100	84.155	ENSPCOG00000020465	TRA2A	100	84.155	Propithecus_coquereli
MGP_SPRETEiJ_G0029368	Tra2a	100	98.592	ENSPVAG00000011298	TRA2A	100	98.592	Pteropus_vampyrus
MGP_SPRETEiJ_G0029368	Tra2a	55	89.103	ENSPNYG00000020134	tra2a	76	90.385	Pundamilia_nyererei
MGP_SPRETEiJ_G0029368	Tra2a	90	73.432	ENSPNAG00000000482	tra2a	90	73.801	Pygocentrus_nattereri
MGP_SPRETEiJ_G0029368	Tra2a	100	100.000	ENSRNOG00000009156	Tra2a	100	100.000	Rattus_norvegicus
MGP_SPRETEiJ_G0029368	Tra2a	100	98.239	ENSRROG00000030758	TRA2A	100	98.907	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0029368	Tra2a	100	98.592	ENSSBOG00000031562	TRA2A	100	98.907	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0029368	Tra2a	89	92.857	ENSSHAG00000005727	TRA2A	88	93.254	Sarcophilus_harrisii
MGP_SPRETEiJ_G0029368	Tra2a	90	81.028	ENSSFOG00015014004	tra2a	90	75.646	Scleropages_formosus
MGP_SPRETEiJ_G0029368	Tra2a	93	71.127	ENSSMAG00000014242	tra2a	90	71.429	Scophthalmus_maximus
MGP_SPRETEiJ_G0029368	Tra2a	90	82.031	ENSSDUG00000005610	tra2a	89	84.766	Seriola_dumerili
MGP_SPRETEiJ_G0029368	Tra2a	55	87.013	ENSSLDG00000025577	tra2a	81	87.013	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0029368	Tra2a	79	100.000	ENSSARG00000012900	TRA2A	80	100.000	Sorex_araneus
MGP_SPRETEiJ_G0029368	Tra2a	100	96.516	ENSSPUG00000006143	TRA2A	100	96.516	Sphenodon_punctatus
MGP_SPRETEiJ_G0029368	Tra2a	90	73.260	ENSSPAG00000004184	tra2a	90	78.022	Stegastes_partitus
MGP_SPRETEiJ_G0029368	Tra2a	100	98.239	ENSSSCG00000015387	TRA2A	100	98.239	Sus_scrofa
MGP_SPRETEiJ_G0029368	Tra2a	61	88.953	ENSTGUG00000002795	TRA2A	62	88.166	Taeniopygia_guttata
MGP_SPRETEiJ_G0029368	Tra2a	100	83.929	ENSTBEG00000013773	TRA2A	100	83.929	Tupaia_belangeri
MGP_SPRETEiJ_G0029368	Tra2a	100	97.887	ENSTTRG00000008922	TRA2A	100	97.887	Tursiops_truncatus
MGP_SPRETEiJ_G0029368	Tra2a	65	98.361	ENSUMAG00000001181	TRA2A	94	98.361	Ursus_maritimus
MGP_SPRETEiJ_G0029368	Tra2a	100	84.155	ENSVPAG00000001829	TRA2A	100	84.155	Vicugna_pacos
MGP_SPRETEiJ_G0029368	Tra2a	100	98.239	ENSVVUG00000001045	TRA2A	100	98.239	Vulpes_vulpes
MGP_SPRETEiJ_G0029368	Tra2a	90	83.270	ENSXETG00000007397	tra2a	90	83.650	Xenopus_tropicalis