EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_SPRETEiJ_G0029462 (Gene tree)
Gene ID
-
Gene Symbol
Smarcad1
Alias
D6Pas1|Etl1
Full Name
SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type
protein_coding
Species
Mus_spretus
Status
putative
Strand
Plus strand
Length
74593 bases
Position
chr6:63583624-63658216
Accession
95453
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_SPRETEiJ_P0077003ResIIIPF04851.151.3e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_SPRETEiJ_T0077016-2529--- (aa)--
MGP_SPRETEiJ_T0077003-5170-MGP_SPRETEiJ_P00770031021 (aa)--
MGP_SPRETEiJ_T0077002-602-MGP_SPRETEiJ_P0077002134 (aa)-UPI0006BBA042
MGP_SPRETEiJ_T0077007-472-MGP_SPRETEiJ_P007700768 (aa)-UPI0006A69FCB
MGP_SPRETEiJ_T0077006-734-MGP_SPRETEiJ_P007700673 (aa)--
MGP_SPRETEiJ_T0077005-600-MGP_SPRETEiJ_P007700573 (aa)--
MGP_SPRETEiJ_T0077004-468--- (aa)--
MGP_SPRETEiJ_T0077014-3095--- (aa)--
MGP_SPRETEiJ_T0077015-648--- (aa)--
MGP_SPRETEiJ_T0077009-2830--- (aa)--
MGP_SPRETEiJ_T0077008-739-MGP_SPRETEiJ_P007700873 (aa)--
MGP_SPRETEiJ_T0077010-4178-MGP_SPRETEiJ_P0077010123 (aa)-UPI0006A6A031
MGP_SPRETEiJ_T0077011-640--- (aa)--
MGP_SPRETEiJ_T0077012-625--- (aa)--
MGP_SPRETEiJ_T0077013-726-MGP_SPRETEiJ_P007701345 (aa)--
Gene Model
Click here to download MGP_SPRETEiJ_G0029462's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0029462's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_SPRETEiJ_G0029462Smarcad15137.523MGP_SPRETEiJ_G0023848Hells6637.705
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_SPRETEiJ_G0029462Smarcad110092.308ENSG00000163104SMARCAD110096.477Homo_sapiens
MGP_SPRETEiJ_G0029462Smarcad19962.375ENSAPOG00000011446smarcad1a9562.375Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0029462Smarcad110091.642ENSAMEG00000005844SMARCAD110091.642Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0029462Smarcad16868.401ENSACIG00000018326smarcad1a10068.401Amphilophus_citrinellus
MGP_SPRETEiJ_G0029462Smarcad110062.232ENSAOCG00000019762smarcad1a9762.232Amphiprion_ocellaris
MGP_SPRETEiJ_G0029462Smarcad110062.375ENSAPEG00000003889smarcad1a9562.375Amphiprion_percula
MGP_SPRETEiJ_G0029462Smarcad17567.788ENSATEG00000015608smarcad1a8167.788Anabas_testudineus
MGP_SPRETEiJ_G0029462Smarcad19471.399ENSAPLG00000004630SMARCAD110071.503Anas_platyrhynchos
MGP_SPRETEiJ_G0029462Smarcad110069.328ENSACAG00000013554SMARCAD110069.523Anolis_carolinensis
MGP_SPRETEiJ_G0029462Smarcad110091.837ENSANAG00000020488SMARCAD19992.913Aotus_nancymaae
MGP_SPRETEiJ_G0029462Smarcad16366.147ENSACLG00000017063smarcad1a6266.147Astatotilapia_calliptera
MGP_SPRETEiJ_G0029462Smarcad17061.376ENSAMXG00000015470smarcad1a9861.376Astyanax_mexicanus
MGP_SPRETEiJ_G0029462Smarcad17758.477ENSAMXG00000019130smarcad1b8957.844Astyanax_mexicanus
MGP_SPRETEiJ_G0029462Smarcad110091.262ENSBTAG00000017061SMARCAD110091.262Bos_taurus
MGP_SPRETEiJ_G0029462Smarcad110092.300ENSCJAG00000006778SMARCAD110092.300Callithrix_jacchus
MGP_SPRETEiJ_G0029462Smarcad110091.254ENSCAFG00000010026SMARCAD110091.156Canis_familiaris
MGP_SPRETEiJ_G0029462Smarcad18692.873ENSCAFG00020003994SMARCAD19992.873Canis_lupus_dingo
MGP_SPRETEiJ_G0029462Smarcad110091.545ENSCHIG00000012905SMARCAD110091.545Capra_hircus
MGP_SPRETEiJ_G0029462Smarcad110092.315ENSTSYG00000002706SMARCAD110092.315Carlito_syrichta
MGP_SPRETEiJ_G0029462Smarcad19075.107ENSCAPG00000016744SMARCAD19676.078Cavia_aperea
MGP_SPRETEiJ_G0029462Smarcad110090.803ENSCPOG00000011398SMARCAD110090.803Cavia_porcellus
MGP_SPRETEiJ_G0029462Smarcad110092.113ENSCCAG00000022264SMARCAD110096.141Cebus_capucinus
MGP_SPRETEiJ_G0029462Smarcad110092.502ENSCATG00000035663SMARCAD110093.476Cercocebus_atys
MGP_SPRETEiJ_G0029462Smarcad18293.690ENSCSAG00000004186SMARCAD110093.690Chlorocebus_sabaeus
MGP_SPRETEiJ_G0029462Smarcad110072.153ENSCPBG00000013203SMARCAD110072.526Chrysemys_picta_bellii
MGP_SPRETEiJ_G0029462Smarcad16449.399ENSCING00000001688-9949.399Ciona_intestinalis
MGP_SPRETEiJ_G0029462Smarcad110092.405ENSCANG00000003556SMARCAD110096.477Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0029462Smarcad110094.336ENSCGRG00001015056Smarcad110094.336Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0029462Smarcad110094.336ENSCGRG00000014087Smarcad110094.336Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0029462Smarcad16662.649ENSCSEG00000017903smarcad1a10045.852Cynoglossus_semilaevis
MGP_SPRETEiJ_G0029462Smarcad110062.054ENSCSEG00000014419-8562.054Cynoglossus_semilaevis
MGP_SPRETEiJ_G0029462Smarcad18056.348ENSDARG00000073721smarcad1b8556.627Danio_rerio
MGP_SPRETEiJ_G0029462Smarcad19164.476ENSDARG00000014041smarcad1a9254.686Danio_rerio
MGP_SPRETEiJ_G0029462Smarcad110091.237ENSDNOG00000000806-10091.237Dasypus_novemcinctus
MGP_SPRETEiJ_G0029462Smarcad110089.116ENSDORG00000012331Smarcad110089.116Dipodomys_ordii
MGP_SPRETEiJ_G0029462Smarcad16345.692FBgn0032157Etl18044.575Drosophila_melanogaster
MGP_SPRETEiJ_G0029462Smarcad16145.866ENSEBUG00000003969smarcad1a9646.029Eptatretus_burgeri
MGP_SPRETEiJ_G0029462Smarcad110091.545ENSEASG00005012382SMARCAD110091.545Equus_asinus_asinus
MGP_SPRETEiJ_G0029462Smarcad110091.545ENSECAG00000011562SMARCAD110091.545Equus_caballus
MGP_SPRETEiJ_G0029462Smarcad17956.569ENSELUG00000019154smarcad1b9351.033Esox_lucius
MGP_SPRETEiJ_G0029462Smarcad110050.512ENSELUG00000018535smarcad1a10050.140Esox_lucius
MGP_SPRETEiJ_G0029462Smarcad110091.440ENSFCAG00000003958SMARCAD110096.477Felis_catus
MGP_SPRETEiJ_G0029462Smarcad110066.473ENSFALG00000006089SMARCAD110066.473Ficedula_albicollis
MGP_SPRETEiJ_G0029462Smarcad110091.618ENSFDAG00000017027SMARCAD110091.618Fukomys_damarensis
MGP_SPRETEiJ_G0029462Smarcad16565.022ENSFHEG00000012778smarcad1a6364.118Fundulus_heteroclitus
MGP_SPRETEiJ_G0029462Smarcad18457.358ENSGMOG00000018995smarcad1a9758.102Gadus_morhua
MGP_SPRETEiJ_G0029462Smarcad18667.531ENSGALG00000037339SMARCAD19967.531Gallus_gallus
MGP_SPRETEiJ_G0029462Smarcad19066.193ENSGAFG00000013498smarcad1a10046.037Gambusia_affinis
MGP_SPRETEiJ_G0029462Smarcad18658.097ENSGACG00000007327smarcad1a9958.097Gasterosteus_aculeatus
MGP_SPRETEiJ_G0029462Smarcad110072.560ENSGAGG00000008582SMARCAD110072.754Gopherus_agassizii
MGP_SPRETEiJ_G0029462Smarcad110092.405ENSGGOG00000023001SMARCAD110092.405Gorilla_gorilla
MGP_SPRETEiJ_G0029462Smarcad16365.991ENSHBUG00000011042smarcad1a6065.991Haplochromis_burtoni
MGP_SPRETEiJ_G0029462Smarcad110091.748ENSHGLG00000005070SMARCAD110091.748Heterocephalus_glaber_female
MGP_SPRETEiJ_G0029462Smarcad110091.748ENSHGLG00100006812SMARCAD110091.748Heterocephalus_glaber_male
MGP_SPRETEiJ_G0029462Smarcad16363.919ENSHCOG00000007848smarcad1a6162.332Hippocampus_comes
MGP_SPRETEiJ_G0029462Smarcad17665.210ENSIPUG00000000242smarcad1a9260.194Ictalurus_punctatus
MGP_SPRETEiJ_G0029462Smarcad18157.006ENSIPUG00000022817smarcad1b8957.485Ictalurus_punctatus
MGP_SPRETEiJ_G0029462Smarcad110092.218ENSSTOG00000001227SMARCAD110092.218Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0029462Smarcad110092.697ENSJJAG00000022342Smarcad110092.697Jaculus_jaculus
MGP_SPRETEiJ_G0029462Smarcad16463.897ENSKMAG00000021351smarcad1a6363.447Kryptolebias_marmoratus
MGP_SPRETEiJ_G0029462Smarcad19764.040ENSLBEG00000008088smarcad1a9464.040Labrus_bergylta
MGP_SPRETEiJ_G0029462Smarcad110053.568ENSLOCG00000012909smarcad1a10055.319Lepisosteus_oculatus
MGP_SPRETEiJ_G0029462Smarcad110089.581ENSLAFG00000000040SMARCAD110089.581Loxodonta_africana
MGP_SPRETEiJ_G0029462Smarcad110092.502ENSMFAG00000042606SMARCAD110093.363Macaca_fascicularis
MGP_SPRETEiJ_G0029462Smarcad18793.363ENSMMUG00000022242SMARCAD110093.363Macaca_mulatta
MGP_SPRETEiJ_G0029462Smarcad110092.405ENSMNEG00000038117SMARCAD110096.309Macaca_nemestrina
MGP_SPRETEiJ_G0029462Smarcad110092.502ENSMLEG00000038333SMARCAD110096.477Mandrillus_leucophaeus
MGP_SPRETEiJ_G0029462Smarcad16962.953ENSMAMG00000000933smarcad1a6862.953Mastacembelus_armatus
MGP_SPRETEiJ_G0029462Smarcad16366.147ENSMZEG00005005203smarcad1a6266.147Maylandia_zebra
MGP_SPRETEiJ_G0029462Smarcad19463.983ENSMGAG00000005577SMARCAD110063.983Meleagris_gallopavo
MGP_SPRETEiJ_G0029462Smarcad110094.336ENSMAUG00000008417Smarcad110094.336Mesocricetus_auratus
MGP_SPRETEiJ_G0029462Smarcad110091.553ENSMICG00000009746SMARCAD110091.553Microcebus_murinus
MGP_SPRETEiJ_G0029462Smarcad110094.336ENSMOCG00000017142Smarcad110094.336Microtus_ochrogaster
MGP_SPRETEiJ_G0029462Smarcad17758.052ENSMMOG00000000275smarcad1a9858.052Mola_mola
MGP_SPRETEiJ_G0029462Smarcad110079.440ENSMODG00000019268SMARCAD110079.440Monodelphis_domestica
MGP_SPRETEiJ_G0029462Smarcad19599.644MGP_CAROLIEiJ_G0028458-7799.644Mus_caroli
MGP_SPRETEiJ_G0029462Smarcad110099.706ENSMUSG00000029920Smarcad110099.706Mus_musculus
MGP_SPRETEiJ_G0029462Smarcad110098.531MGP_PahariEiJ_G0022198Smarcad110098.531Mus_pahari
MGP_SPRETEiJ_G0029462Smarcad110091.448ENSMPUG00000002111SMARCAD110091.448Mustela_putorius_furo
MGP_SPRETEiJ_G0029462Smarcad110088.727ENSMLUG00000000425SMARCAD110088.727Myotis_lucifugus
MGP_SPRETEiJ_G0029462Smarcad110091.910ENSNGAG00000000810Smarcad110091.910Nannospalax_galili
MGP_SPRETEiJ_G0029462Smarcad16166.346ENSNBRG00000012749smarcad1a7466.346Neolamprologus_brichardi
MGP_SPRETEiJ_G0029462Smarcad110092.405ENSNLEG00000014225SMARCAD110096.477Nomascus_leucogenys
MGP_SPRETEiJ_G0029462Smarcad110091.165ENSODEG00000004334SMARCAD110091.068Octodon_degus
MGP_SPRETEiJ_G0029462Smarcad110052.427ENSONIG00000015059smarcad1a8958.142Oreochromis_niloticus
MGP_SPRETEiJ_G0029462Smarcad18082.367ENSOANG00000013764SMARCAD110082.488Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0029462Smarcad110092.495ENSOCUG00000017283SMARCAD110092.495Oryctolagus_cuniculus
MGP_SPRETEiJ_G0029462Smarcad16366.615ENSORLG00000004869smarcad1a6464.095Oryzias_latipes
MGP_SPRETEiJ_G0029462Smarcad16366.459ENSORLG00020020569smarcad1a6463.947Oryzias_latipes_hni
MGP_SPRETEiJ_G0029462Smarcad16366.303ENSORLG00015009045smarcad1a6463.798Oryzias_latipes_hsok
MGP_SPRETEiJ_G0029462Smarcad16564.812ENSOMEG00000023032smarcad1a6960.685Oryzias_melastigma
MGP_SPRETEiJ_G0029462Smarcad110090.962ENSOGAG00000011444SMARCAD110090.962Otolemur_garnettii
MGP_SPRETEiJ_G0029462Smarcad110091.545ENSOARG00000017851SMARCAD110091.545Ovis_aries
MGP_SPRETEiJ_G0029462Smarcad110092.502ENSPPAG00000035715SMARCAD110092.502Pan_paniscus
MGP_SPRETEiJ_G0029462Smarcad110091.440ENSPPRG00000024756SMARCAD110096.477Panthera_pardus
MGP_SPRETEiJ_G0029462Smarcad110091.262ENSPTIG00000017868SMARCAD110091.262Panthera_tigris_altaica
MGP_SPRETEiJ_G0029462Smarcad110092.405ENSPTRG00000023126SMARCAD110096.477Pan_troglodytes
MGP_SPRETEiJ_G0029462Smarcad110091.359ENSPANG00000019757SMARCAD110091.359Papio_anubis
MGP_SPRETEiJ_G0029462Smarcad110071.716ENSPSIG00000010255SMARCAD110071.716Pelodiscus_sinensis
MGP_SPRETEiJ_G0029462Smarcad16364.230ENSPMGG00000010735smarcad1a9562.556Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0029462Smarcad110079.941ENSPEMG00000001854Smarcad110079.843Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0029462Smarcad19947.443ENSPMAG00000003516smarcad1a9948.088Petromyzon_marinus
MGP_SPRETEiJ_G0029462Smarcad17785.461ENSPCIG00000008137SMARCAD19886.813Phascolarctos_cinereus
MGP_SPRETEiJ_G0029462Smarcad19166.147ENSPFOG00000019116smarcad1a7166.147Poecilia_formosa
MGP_SPRETEiJ_G0029462Smarcad16365.991ENSPLAG00000000108smarcad1a5865.991Poecilia_latipinna
MGP_SPRETEiJ_G0029462Smarcad16366.147ENSPMEG00000009155smarcad1a5866.147Poecilia_mexicana
MGP_SPRETEiJ_G0029462Smarcad19166.615ENSPREG00000018185smarcad1a8366.615Poecilia_reticulata
MGP_SPRETEiJ_G0029462Smarcad110091.829ENSPPYG00000014935SMARCAD110091.829Pongo_abelii
MGP_SPRETEiJ_G0029462Smarcad17393.115ENSPCOG00000020478SMARCAD18993.115Propithecus_coquereli
MGP_SPRETEiJ_G0029462Smarcad110089.903ENSPVAG00000001760SMARCAD110089.903Pteropus_vampyrus
MGP_SPRETEiJ_G0029462Smarcad16165.865ENSPNYG00000010087smarcad1a8560.000Pundamilia_nyererei
MGP_SPRETEiJ_G0029462Smarcad17659.142ENSPNAG00000010099smarcad1b8458.772Pygocentrus_nattereri
MGP_SPRETEiJ_G0029462Smarcad110050.469ENSPNAG00000001663smarcad1a9055.237Pygocentrus_nattereri
MGP_SPRETEiJ_G0029462Smarcad110096.973ENSRNOG00000006391Smarcad110096.973Rattus_norvegicus
MGP_SPRETEiJ_G0029462Smarcad110092.308ENSRBIG00000041989SMARCAD110092.308Rhinopithecus_bieti
MGP_SPRETEiJ_G0029462Smarcad110092.308ENSRROG00000035309SMARCAD110092.308Rhinopithecus_roxellana
MGP_SPRETEiJ_G0029462Smarcad110092.210ENSSBOG00000032114SMARCAD110096.141Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0029462Smarcad110080.598ENSSHAG00000001279SMARCAD110080.502Sarcophilus_harrisii
MGP_SPRETEiJ_G0029462Smarcad17557.662ENSSFOG00015020909smarcad1a10057.662Scleropages_formosus
MGP_SPRETEiJ_G0029462Smarcad110050.470ENSSFOG00015016814smarcad1b10050.326Scleropages_formosus
MGP_SPRETEiJ_G0029462Smarcad19763.897ENSSMAG00000001326smarcad1a9563.897Scophthalmus_maximus
MGP_SPRETEiJ_G0029462Smarcad16862.841ENSSDUG00000022338smarcad1a8262.841Seriola_dumerili
MGP_SPRETEiJ_G0029462Smarcad16862.069ENSSLDG00000024986smarcad1a6562.069Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0029462Smarcad15883.920ENSSPUG00000004633SMARCAD110083.920Sphenodon_punctatus
MGP_SPRETEiJ_G0029462Smarcad16863.037ENSSPAG00000001970smarcad1a6959.973Stegastes_partitus
MGP_SPRETEiJ_G0029462Smarcad110091.545ENSSSCG00000009193SMARCAD110092.866Sus_scrofa
MGP_SPRETEiJ_G0029462Smarcad17676.366ENSTGUG00000003127SMARCAD110076.620Taeniopygia_guttata
MGP_SPRETEiJ_G0029462Smarcad18457.356ENSTNIG00000017585smarcad1a9957.356Tetraodon_nigroviridis
MGP_SPRETEiJ_G0029462Smarcad19096.627ENSTBEG00000002789SMARCAD19196.627Tupaia_belangeri
MGP_SPRETEiJ_G0029462Smarcad19890.575ENSTTRG00000000226SMARCAD110089.881Tursiops_truncatus
MGP_SPRETEiJ_G0029462Smarcad110091.740ENSUAMG00000022262SMARCAD19992.992Ursus_americanus
MGP_SPRETEiJ_G0029462Smarcad110091.829ENSUMAG00000004549SMARCAD110091.829Ursus_maritimus
MGP_SPRETEiJ_G0029462Smarcad110091.448ENSVVUG00000007271SMARCAD110092.985Vulpes_vulpes
MGP_SPRETEiJ_G0029462Smarcad18465.336ENSXETG00000019214smarcad110065.336Xenopus_tropicalis
MGP_SPRETEiJ_G0029462Smarcad17657.935ENSXCOG00000005232smarcad1a9056.061Xiphophorus_couchianus
MGP_SPRETEiJ_G0029462Smarcad16365.835ENSXMAG00000015350smarcad1a5865.835Xiphophorus_maculatus

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