EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_SPRETEiJ_G0029499 (Gene tree)
Gene ID
-
Gene Symbol
Polr1a
Alias
194kDa|2900087K15Rik|3010014K16Rik|RPA194|Rpo1-4|mRPA1
Full Name
polymerase (RNA) I polypeptide A
Gene Type
protein_coding
Species
Mus_spretus
Status
putative
Strand
Plus strand
Length
72427 bases
Position
chr6:70196928-70269354
Accession
1096397
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_SPRETEiJ_P0077166RNA_pol_Rpb1_5PF04998.177.7e-10311
MGP_SPRETEiJ_P0077166RNA_pol_Rpb1_4PF05000.171.5e-2511
MGP_SPRETEiJ_P0077166RNA_pol_Rpb1_2PF00623.203.1e-7011
MGP_SPRETEiJ_P0077166RNA_pol_Rpb1_3PF04983.189e-3711
MGP_SPRETEiJ_P0077166RNA_pol_Rpb1_1PF04997.122.1e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_SPRETEiJ_T0077173-560--- (aa)--
MGP_SPRETEiJ_T0077172-625-MGP_SPRETEiJ_P007717247 (aa)--
MGP_SPRETEiJ_T0077171-584--- (aa)--
MGP_SPRETEiJ_T0077170-352--- (aa)--
MGP_SPRETEiJ_T0077168-3288--- (aa)--
MGP_SPRETEiJ_T0077169-358--- (aa)--
MGP_SPRETEiJ_T0077174-4579-MGP_SPRETEiJ_P0077174743 (aa)--
MGP_SPRETEiJ_T0077165-3368-MGP_SPRETEiJ_P0077165282 (aa)-UPI000719A3EF
MGP_SPRETEiJ_T0077166-9327-MGP_SPRETEiJ_P00771661749 (aa)--
MGP_SPRETEiJ_T0077167-1495--- (aa)--
Gene Model
Click here to download MGP_SPRETEiJ_G0029499's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0029499's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_SPRETEiJ_G0029499Polr1a6730.539MGP_SPRETEiJ_G0019894Polr3a7232.551
MGP_SPRETEiJ_G0029499Polr1a7233.333MGP_SPRETEiJ_G0017423Polr2a5137.143
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_SPRETEiJ_G0029499Polr1a9592.821ENSG00000068654POLR1A10084.633Homo_sapiens
MGP_SPRETEiJ_G0029499Polr1a9952.143ENSAPOG00000017945polr1a9967.142Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0029499Polr1a10085.192ENSAMEG00000005807POLR1A10088.627Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0029499Polr1a9665.944ENSACIG00000022147polr1a10065.877Amphilophus_citrinellus
MGP_SPRETEiJ_G0029499Polr1a10063.952ENSAOCG00000017336polr1a10066.275Amphiprion_ocellaris
MGP_SPRETEiJ_G0029499Polr1a9470.139ENSAPEG00000016105polr1a9770.139Amphiprion_percula
MGP_SPRETEiJ_G0029499Polr1a10063.993ENSATEG00000016773polr1a10064.448Anabas_testudineus
MGP_SPRETEiJ_G0029499Polr1a9966.445ENSAPLG00000013871POLR1A9970.761Anas_platyrhynchos
MGP_SPRETEiJ_G0029499Polr1a9967.827ENSACAG00000012141POLR1A9967.084Anolis_carolinensis
MGP_SPRETEiJ_G0029499Polr1a10084.637ENSANAG00000033927POLR1A10084.339Aotus_nancymaae
MGP_SPRETEiJ_G0029499Polr1a10060.694ENSACLG00000020541polr1a10060.272Astatotilapia_calliptera
MGP_SPRETEiJ_G0029499Polr1a8558.159ENSAMXG00000011559-8558.159Astyanax_mexicanus
MGP_SPRETEiJ_G0029499Polr1a5561.446ENSAMXG00000011553-9465.267Astyanax_mexicanus
MGP_SPRETEiJ_G0029499Polr1a10085.314ENSBTAG00000006481POLR1A10084.448Bos_taurus
MGP_SPRETEiJ_G0029499Polr1a9939.239WBGene00012999rpoa-19837.902Caenorhabditis_elegans
MGP_SPRETEiJ_G0029499Polr1a10083.847ENSCJAG00000019547POLR1A10083.665Callithrix_jacchus
MGP_SPRETEiJ_G0029499Polr1a10084.971ENSCAFG00000007613POLR1A10084.786Canis_familiaris
MGP_SPRETEiJ_G0029499Polr1a10085.257ENSCAFG00020014752POLR1A10085.071Canis_lupus_dingo
MGP_SPRETEiJ_G0029499Polr1a10084.343ENSCHIG00000018204POLR1A10084.057Capra_hircus
MGP_SPRETEiJ_G0029499Polr1a10084.000ENSTSYG00000002761POLR1A10083.305Carlito_syrichta
MGP_SPRETEiJ_G0029499Polr1a9781.525ENSCAPG00000010132POLR1A10081.151Cavia_aperea
MGP_SPRETEiJ_G0029499Polr1a10085.081ENSCPOG00000012350POLR1A10085.649Cavia_porcellus
MGP_SPRETEiJ_G0029499Polr1a10084.475ENSCCAG00000019839POLR1A10084.348Cebus_capucinus
MGP_SPRETEiJ_G0029499Polr1a10084.760ENSCATG00000029786POLR1A10084.690Cercocebus_atys
MGP_SPRETEiJ_G0029499Polr1a10086.138ENSCLAG00000005187POLR1A10085.722Chinchilla_lanigera
MGP_SPRETEiJ_G0029499Polr1a10084.760ENSCSAG00000016251POLR1A10085.251Chlorocebus_sabaeus
MGP_SPRETEiJ_G0029499Polr1a9972.043ENSCHOG00000003766-8490.955Choloepus_hoffmanni
MGP_SPRETEiJ_G0029499Polr1a9973.013ENSCPBG00000001115POLR1A9972.556Chrysemys_picta_bellii
MGP_SPRETEiJ_G0029499Polr1a9076.923ENSCSAVG00000007184-9749.541Ciona_savignyi
MGP_SPRETEiJ_G0029499Polr1a10083.112ENSCANG00000031785POLR1A10081.730Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0029499Polr1a10090.726ENSCGRG00001006651Polr1a10085.878Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0029499Polr1a10090.726ENSCGRG00000010834Polr1a10089.015Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0029499Polr1a9988.889ENSCGRG00000007004-9788.929Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0029499Polr1a10059.840ENSCSEG00000020190polr1a10059.977Cynoglossus_semilaevis
MGP_SPRETEiJ_G0029499Polr1a10056.614ENSCVAG00000020941polr1a10062.984Cyprinodon_variegatus
MGP_SPRETEiJ_G0029499Polr1a10064.347ENSDARG00000098375polr1a10065.279Danio_rerio
MGP_SPRETEiJ_G0029499Polr1a10079.658ENSDNOG00000010829POLR1A10079.316Dasypus_novemcinctus
MGP_SPRETEiJ_G0029499Polr1a10088.306ENSDORG00000008298Polr1a10085.657Dipodomys_ordii
MGP_SPRETEiJ_G0029499Polr1a9051.923FBgn0019938RpI19942.213Drosophila_melanogaster
MGP_SPRETEiJ_G0029499Polr1a9980.645ENSETEG00000000412-7296.875Echinops_telfairi
MGP_SPRETEiJ_G0029499Polr1a9166.667ENSEBUG00000005667-9966.667Eptatretus_burgeri
MGP_SPRETEiJ_G0029499Polr1a10085.959ENSEASG00005001625POLR1A10085.731Equus_asinus_asinus
MGP_SPRETEiJ_G0029499Polr1a10085.845ENSECAG00000030510-10088.648Equus_caballus
MGP_SPRETEiJ_G0029499Polr1a10085.845ENSECAG00000036306-10088.648Equus_caballus
MGP_SPRETEiJ_G0029499Polr1a10085.845ENSECAG00000010092POLR1A10088.648Equus_caballus
MGP_SPRETEiJ_G0029499Polr1a8591.489ENSEEUG00000000676POLR1A8591.489Erinaceus_europaeus
MGP_SPRETEiJ_G0029499Polr1a10065.505ENSELUG00000012769polr1a9964.937Esox_lucius
MGP_SPRETEiJ_G0029499Polr1a10084.826ENSFCAG00000008966POLR1A10084.738Felis_catus
MGP_SPRETEiJ_G0029499Polr1a9970.520ENSFALG00000010082POLR1A9969.550Ficedula_albicollis
MGP_SPRETEiJ_G0029499Polr1a10086.294ENSFDAG00000013726POLR1A10085.763Fukomys_damarensis
MGP_SPRETEiJ_G0029499Polr1a10059.852ENSFHEG00000005996polr1a10059.784Fundulus_heteroclitus
MGP_SPRETEiJ_G0029499Polr1a10059.086ENSGMOG00000002230polr1a10058.985Gadus_morhua
MGP_SPRETEiJ_G0029499Polr1a9961.649ENSGALG00000038160-9966.960Gallus_gallus
MGP_SPRETEiJ_G0029499Polr1a10062.978ENSGAFG00000015266polr1a10062.699Gambusia_affinis
MGP_SPRETEiJ_G0029499Polr1a10063.026ENSGACG00000018791polr1a10062.443Gasterosteus_aculeatus
MGP_SPRETEiJ_G0029499Polr1a8657.028ENSGAGG00000020105-8957.028Gopherus_agassizii
MGP_SPRETEiJ_G0029499Polr1a9969.717ENSGAGG00000004984-9680.176Gopherus_agassizii
MGP_SPRETEiJ_G0029499Polr1a10084.703ENSGGOG00000001788POLR1A10084.633Gorilla_gorilla
MGP_SPRETEiJ_G0029499Polr1a8670.273ENSHBUG00000020021polr1a9870.071Haplochromis_burtoni
MGP_SPRETEiJ_G0029499Polr1a10086.629ENSHGLG00000006334POLR1A10086.106Heterocephalus_glaber_female
MGP_SPRETEiJ_G0029499Polr1a10086.325ENSHGLG00100006614POLR1A10085.804Heterocephalus_glaber_male
MGP_SPRETEiJ_G0029499Polr1a10060.761ENSHCOG00000003345polr1a10060.295Hippocampus_comes
MGP_SPRETEiJ_G0029499Polr1a10064.676ENSIPUG00000013174polr1a10064.846Ictalurus_punctatus
MGP_SPRETEiJ_G0029499Polr1a10084.048ENSSTOG00000012580POLR1A10083.648Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0029499Polr1a10086.465ENSJJAG00000013113Polr1a10086.636Jaculus_jaculus
MGP_SPRETEiJ_G0029499Polr1a10063.512ENSKMAG00000007399polr1a10063.056Kryptolebias_marmoratus
MGP_SPRETEiJ_G0029499Polr1a9467.495ENSLBEG00000015401polr1a9967.012Labrus_bergylta
MGP_SPRETEiJ_G0029499Polr1a9962.230ENSLACG00000003218polr1a9976.336Latimeria_chalumnae
MGP_SPRETEiJ_G0029499Polr1a10069.266ENSLOCG00000010881polr1a10068.601Lepisosteus_oculatus
MGP_SPRETEiJ_G0029499Polr1a10084.220ENSLAFG00000014948POLR1A10084.105Loxodonta_africana
MGP_SPRETEiJ_G0029499Polr1a10084.760ENSMFAG00000046097POLR1A10084.966Macaca_fascicularis
MGP_SPRETEiJ_G0029499Polr1a10084.760ENSMMUG00000015815POLR1A10084.966Macaca_mulatta
MGP_SPRETEiJ_G0029499Polr1a10084.760ENSMNEG00000043313POLR1A10084.966Macaca_nemestrina
MGP_SPRETEiJ_G0029499Polr1a10084.132ENSMLEG00000042428POLR1A10084.339Mandrillus_leucophaeus
MGP_SPRETEiJ_G0029499Polr1a10064.786ENSMAMG00000016565polr1a10064.709Mastacembelus_armatus
MGP_SPRETEiJ_G0029499Polr1a10063.879ENSMZEG00005004915polr1a10063.394Maylandia_zebra
MGP_SPRETEiJ_G0029499Polr1a9967.886ENSMGAG00000013111POLR1A9967.332Meleagris_gallopavo
MGP_SPRETEiJ_G0029499Polr1a10091.925ENSMAUG00000008497Polr1a10090.717Mesocricetus_auratus
MGP_SPRETEiJ_G0029499Polr1a10085.568ENSMICG00000000757POLR1A10085.202Microcebus_murinus
MGP_SPRETEiJ_G0029499Polr1a10091.481ENSMOCG00000000122Polr1a10090.852Microtus_ochrogaster
MGP_SPRETEiJ_G0029499Polr1a10063.522ENSMMOG00000010216polr1a10063.185Mola_mola
MGP_SPRETEiJ_G0029499Polr1a10073.526ENSMODG00000009335POLR1A10073.288Monodelphis_domestica
MGP_SPRETEiJ_G0029499Polr1a10059.467ENSMALG00000013363polr1a10063.095Monopterus_albus
MGP_SPRETEiJ_G0029499Polr1a10097.872MGP_CAROLIEiJ_G0028494Polr1a10097.872Mus_caroli
MGP_SPRETEiJ_G0029499Polr1a100100.000ENSMUSG00000049553Polr1a100100.000Mus_musculus
MGP_SPRETEiJ_G0029499Polr1a10094.482MGP_PahariEiJ_G0022230Polr1a10093.540Mus_pahari
MGP_SPRETEiJ_G0029499Polr1a10085.714ENSMPUG00000009135POLR1A10084.983Mustela_putorius_furo
MGP_SPRETEiJ_G0029499Polr1a10084.475ENSMLUG00000015723POLR1A10084.817Myotis_lucifugus
MGP_SPRETEiJ_G0029499Polr1a10088.857ENSNGAG00000017907Polr1a10088.114Nannospalax_galili
MGP_SPRETEiJ_G0029499Polr1a10064.103ENSNBRG00000000519polr1a10063.564Neolamprologus_brichardi
MGP_SPRETEiJ_G0029499Polr1a10082.557ENSNLEG00000002264POLR1A10082.483Nomascus_leucogenys
MGP_SPRETEiJ_G0029499Polr1a7492.913ENSMEUG00000011665-7592.913Notamacropus_eugenii
MGP_SPRETEiJ_G0029499Polr1a9979.456ENSOPRG00000008269POLR1A10078.972Ochotona_princeps
MGP_SPRETEiJ_G0029499Polr1a10086.693ENSODEG00000003542POLR1A10086.049Octodon_degus
MGP_SPRETEiJ_G0029499Polr1a10064.237ENSONIG00000015895polr1a10063.952Oreochromis_niloticus
MGP_SPRETEiJ_G0029499Polr1a6568.474ENSOANG00000000237-10067.886Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0029499Polr1a9067.323ENSOANG00000012384-9970.508Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0029499Polr1a10086.431ENSOCUG00000010138POLR1A10085.959Oryctolagus_cuniculus
MGP_SPRETEiJ_G0029499Polr1a10063.362ENSORLG00000008753polr1a9963.248Oryzias_latipes
MGP_SPRETEiJ_G0029499Polr1a10062.336ENSORLG00020020726polr1a9962.279Oryzias_latipes_hni
MGP_SPRETEiJ_G0029499Polr1a9671.277ENSORLG00015016071polr1a9971.277Oryzias_latipes_hsok
MGP_SPRETEiJ_G0029499Polr1a5658.852ENSOMEG00000019310-9463.014Oryzias_melastigma
MGP_SPRETEiJ_G0029499Polr1a8258.874ENSOMEG00000019264-10049.530Oryzias_melastigma
MGP_SPRETEiJ_G0029499Polr1a10085.967ENSOGAG00000004031POLR1A10085.023Otolemur_garnettii
MGP_SPRETEiJ_G0029499Polr1a10085.217ENSOARG00000020601POLR1A10084.357Ovis_aries
MGP_SPRETEiJ_G0029499Polr1a10084.532ENSPPAG00000042450POLR1A10084.462Pan_paniscus
MGP_SPRETEiJ_G0029499Polr1a10084.940ENSPPRG00000006702POLR1A10084.795Panthera_pardus
MGP_SPRETEiJ_G0029499Polr1a10084.480ENSPTIG00000018783POLR1A10084.336Panthera_tigris_altaica
MGP_SPRETEiJ_G0029499Polr1a10084.909ENSPTRG00000012147POLR1A10085.080Pan_troglodytes
MGP_SPRETEiJ_G0029499Polr1a10084.760ENSPANG00000025908POLR1A10084.690Papio_anubis
MGP_SPRETEiJ_G0029499Polr1a9473.611ENSPKIG00000005468polr1a9973.611Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0029499Polr1a9967.604ENSPSIG00000009321-9969.424Pelodiscus_sinensis
MGP_SPRETEiJ_G0029499Polr1a9046.245ENSPMGG00000009718polr1a9567.622Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0029499Polr1a10092.167ENSPEMG00000022224Polr1a10091.543Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0029499Polr1a9972.760ENSPCIG00000004222POLR1A9976.393Phascolarctos_cinereus
MGP_SPRETEiJ_G0029499Polr1a10063.512ENSPFOG00000005025polr1a10063.056Poecilia_formosa
MGP_SPRETEiJ_G0029499Polr1a10063.890ENSPLAG00000021389polr1a10063.434Poecilia_latipinna
MGP_SPRETEiJ_G0029499Polr1a10061.652ENSPMEG00000006463polr1a10061.652Poecilia_mexicana
MGP_SPRETEiJ_G0029499Polr1a10063.610ENSPREG00000002389polr1a10063.098Poecilia_reticulata
MGP_SPRETEiJ_G0029499Polr1a10084.132ENSPPYG00000012217POLR1A10084.121Pongo_abelii
MGP_SPRETEiJ_G0029499Polr1a9388.000ENSPCAG00000011582POLR1A9181.202Procavia_capensis
MGP_SPRETEiJ_G0029499Polr1a10085.918ENSPCOG00000026987POLR1A10085.438Propithecus_coquereli
MGP_SPRETEiJ_G0029499Polr1a10082.205ENSPVAG00000012674POLR1A9582.192Pteropus_vampyrus
MGP_SPRETEiJ_G0029499Polr1a10063.879ENSPNYG00000000026polr1a10063.419Pundamilia_nyererei
MGP_SPRETEiJ_G0029499Polr1a10064.683ENSPNAG00000019223polr1a9967.992Pygocentrus_nattereri
MGP_SPRETEiJ_G0029499Polr1a10093.136ENSRNOG00000009545Polr1a10091.881Rattus_norvegicus
MGP_SPRETEiJ_G0029499Polr1a10084.646ENSRBIG00000028335POLR1A10084.405Rhinopithecus_bieti
MGP_SPRETEiJ_G0029499Polr1a10084.589ENSRROG00000031473POLR1A10084.348Rhinopithecus_roxellana
MGP_SPRETEiJ_G0029499Polr1a9936.096YOR341WRPA1909935.813Saccharomyces_cerevisiae
MGP_SPRETEiJ_G0029499Polr1a10084.247ENSSBOG00000030262POLR1A10084.007Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0029499Polr1a10072.014ENSSHAG00000014739POLR1A10071.160Sarcophilus_harrisii
MGP_SPRETEiJ_G0029499Polr1a10060.215ENSSFOG00015019716polr1a10066.420Scleropages_formosus
MGP_SPRETEiJ_G0029499Polr1a10063.667ENSSMAG00000014342polr1a10063.362Scophthalmus_maximus
MGP_SPRETEiJ_G0029499Polr1a10065.131ENSSDUG00000014631polr1a10065.190Seriola_dumerili
MGP_SPRETEiJ_G0029499Polr1a10063.392ENSSLDG00000024095polr1a9967.339Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0029499Polr1a7495.745ENSSARG00000003136-7595.745Sorex_araneus
MGP_SPRETEiJ_G0029499Polr1a9376.410ENSSPUG00000004215POLR1A9876.410Sphenodon_punctatus
MGP_SPRETEiJ_G0029499Polr1a9946.237ENSSPAG00000016341polr1a9570.901Stegastes_partitus
MGP_SPRETEiJ_G0029499Polr1a9981.720ENSSSCG00000008226POLR1A9987.745Sus_scrofa
MGP_SPRETEiJ_G0029499Polr1a9969.311ENSTGUG00000010704POLR1A10069.311Taeniopygia_guttata
MGP_SPRETEiJ_G0029499Polr1a10061.600ENSTRUG00000002210polr1a9764.129Takifugu_rubripes
MGP_SPRETEiJ_G0029499Polr1a10058.452ENSTNIG00000010116polr1a10058.452Tetraodon_nigroviridis
MGP_SPRETEiJ_G0029499Polr1a9982.796ENSTBEG00000008646POLR1A7496.460Tupaia_belangeri
MGP_SPRETEiJ_G0029499Polr1a10081.361ENSTTRG00000008597POLR1A10081.246Tursiops_truncatus
MGP_SPRETEiJ_G0029499Polr1a10083.200ENSUAMG00000012158-9484.488Ursus_americanus
MGP_SPRETEiJ_G0029499Polr1a9972.043ENSUAMG00000000099-9872.143Ursus_americanus
MGP_SPRETEiJ_G0029499Polr1a10084.057ENSUMAG00000006700POLR1A9787.407Ursus_maritimus
MGP_SPRETEiJ_G0029499Polr1a10084.914ENSVVUG00000001245POLR1A10084.729Vulpes_vulpes
MGP_SPRETEiJ_G0029499Polr1a10067.749ENSXETG00000001952polr1a10069.182Xenopus_tropicalis
MGP_SPRETEiJ_G0029499Polr1a5361.745ENSXCOG00000013384polr1a9274.542Xiphophorus_couchianus
MGP_SPRETEiJ_G0029499Polr1a5259.432ENSXCOG00000007112-9162.500Xiphophorus_couchianus
MGP_SPRETEiJ_G0029499Polr1a10063.476ENSXMAG00000004032polr1a10063.134Xiphophorus_maculatus

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