EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_SPRETEiJ_G0029726 (Gene tree)
Gene ID
-
Gene Symbol
Trnt1
Alias
2410043H24Rik|2610044E04Rik|CGI-47
Full Name
tRNA nucleotidyl transferase%2C CCA-adding%2C 1
Gene Type
protein_coding
Species
Mus_spretus
Status
putative
Strand
Plus strand
Length
13271 bases
Position
chr6:106485568-106498838
Accession
1917297
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_SPRETEiJ_P0078324PolyA_polPF01743.204.7e-3411
MGP_SPRETEiJ_P0078325PolyA_polPF01743.201.9e-3311
MGP_SPRETEiJ_P0078326PolyA_polPF01743.201.9e-3311
MGP_SPRETEiJ_P0078327PolyA_polPF01743.201.9e-3311
MGP_SPRETEiJ_P0078331PolyA_polPF01743.207.3e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_SPRETEiJ_T0078329-367--- (aa)--
MGP_SPRETEiJ_T0078328-355--- (aa)--
MGP_SPRETEiJ_T0078327-1398-MGP_SPRETEiJ_P0078327434 (aa)--
MGP_SPRETEiJ_T0078326-2235-MGP_SPRETEiJ_P0078326434 (aa)--
MGP_SPRETEiJ_T0078325-1616-MGP_SPRETEiJ_P0078325434 (aa)--
MGP_SPRETEiJ_T0078324-1913-MGP_SPRETEiJ_P0078324215 (aa)-UPI00005ABBE7
MGP_SPRETEiJ_T0078330-772-MGP_SPRETEiJ_P007833071 (aa)-UPI0006BBA044
MGP_SPRETEiJ_T0078331-474-MGP_SPRETEiJ_P0078331134 (aa)-UPI0006A69EF7
Gene Model
Click here to download MGP_SPRETEiJ_G0029726's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0029726's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_SPRETEiJ_G0029726Trnt110092.627ENSG00000072756TRNT110092.627Homo_sapiens
MGP_SPRETEiJ_G0029726Trnt18381.564ENSAPOG00000013687trnt19568.550Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0029726Trnt110090.138ENSAMEG00000014520TRNT110090.138Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0029726Trnt19176.531ENSACIG00000021706trnt19967.689Amphilophus_citrinellus
MGP_SPRETEiJ_G0029726Trnt19176.020ENSAOCG00000024612trnt19967.059Amphiprion_ocellaris
MGP_SPRETEiJ_G0029726Trnt19164.286ENSAPEG00000022627trnt19560.732Amphiprion_percula
MGP_SPRETEiJ_G0029726Trnt19370.223ENSATEG00000008928trnt19970.223Anabas_testudineus
MGP_SPRETEiJ_G0029726Trnt18975.194ENSAPLG00000004258TRNT19675.194Anas_platyrhynchos
MGP_SPRETEiJ_G0029726Trnt19974.424ENSACAG00000005657TRNT19974.424Anolis_carolinensis
MGP_SPRETEiJ_G0029726Trnt110092.166ENSANAG00000024802TRNT110092.166Aotus_nancymaae
MGP_SPRETEiJ_G0029726Trnt19175.510ENSACLG00000022227trnt19966.824Astatotilapia_calliptera
MGP_SPRETEiJ_G0029726Trnt19769.121ENSAMXG00000003960trnt19768.957Astyanax_mexicanus
MGP_SPRETEiJ_G0029726Trnt110091.475ENSBTAG00000019534TRNT110091.475Bos_taurus
MGP_SPRETEiJ_G0029726Trnt18163.636WBGene00010089hpo-319444.181Caenorhabditis_elegans
MGP_SPRETEiJ_G0029726Trnt110092.627ENSCJAG00000015466TRNT110092.627Callithrix_jacchus
MGP_SPRETEiJ_G0029726Trnt110089.631ENSCAFG00000005985TRNT19989.631Canis_familiaris
MGP_SPRETEiJ_G0029726Trnt110089.631ENSCAFG00020014746TRNT19989.631Canis_lupus_dingo
MGP_SPRETEiJ_G0029726Trnt110091.475ENSCHIG00000007030TRNT19991.475Capra_hircus
MGP_SPRETEiJ_G0029726Trnt110092.857ENSTSYG00000013390TRNT110092.857Carlito_syrichta
MGP_SPRETEiJ_G0029726Trnt18775.397ENSCAPG00000006891TRNT110075.397Cavia_aperea
MGP_SPRETEiJ_G0029726Trnt19991.375ENSCPOG00000007849TRNT19991.375Cavia_porcellus
MGP_SPRETEiJ_G0029726Trnt19589.423ENSCCAG00000002919TRNT110091.521Cebus_capucinus
MGP_SPRETEiJ_G0029726Trnt19993.072ENSCATG00000031985TRNT19993.072Cercocebus_atys
MGP_SPRETEiJ_G0029726Trnt19992.541ENSCLAG00000005186TRNT19992.541Chinchilla_lanigera
MGP_SPRETEiJ_G0029726Trnt110093.548ENSCSAG00000011052TRNT110093.548Chlorocebus_sabaeus
MGP_SPRETEiJ_G0029726Trnt110087.313ENSCHOG00000005712TRNT18591.566Choloepus_hoffmanni
MGP_SPRETEiJ_G0029726Trnt19481.220ENSCPBG00000017636TRNT19481.220Chrysemys_picta_bellii
MGP_SPRETEiJ_G0029726Trnt18162.644ENSCING00000007069-9944.526Ciona_intestinalis
MGP_SPRETEiJ_G0029726Trnt18958.854ENSCSAVG00000007494-9944.575Ciona_savignyi
MGP_SPRETEiJ_G0029726Trnt110093.088ENSCANG00000039030TRNT110093.088Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0029726Trnt110096.774ENSCGRG00001009998Trnt110096.774Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0029726Trnt110096.774ENSCGRG00000013410Trnt110096.774Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0029726Trnt18380.447ENSCSEG00000008157trnt19668.627Cynoglossus_semilaevis
MGP_SPRETEiJ_G0029726Trnt18380.447ENSCVAG00000019770trnt19669.363Cyprinodon_variegatus
MGP_SPRETEiJ_G0029726Trnt19174.874ENSDARG00000075297trnt19967.674Danio_rerio
MGP_SPRETEiJ_G0029726Trnt110090.092ENSDNOG00000008837TRNT110090.092Dasypus_novemcinctus
MGP_SPRETEiJ_G0029726Trnt110090.092ENSDORG00000014035Trnt110090.092Dipodomys_ordii
MGP_SPRETEiJ_G0029726Trnt18067.816FBgn0037369CG21008349.010Drosophila_melanogaster
MGP_SPRETEiJ_G0029726Trnt18691.892ENSETEG00000018177TRNT110087.952Echinops_telfairi
MGP_SPRETEiJ_G0029726Trnt18570.109ENSEBUG00000012779-9561.787Eptatretus_burgeri
MGP_SPRETEiJ_G0029726Trnt110091.244ENSEASG00005003577TRNT110091.244Equus_asinus_asinus
MGP_SPRETEiJ_G0029726Trnt110091.475ENSECAG00000014420TRNT110091.475Equus_caballus
MGP_SPRETEiJ_G0029726Trnt19988.837ENSEEUG00000009567TRNT19988.837Erinaceus_europaeus
MGP_SPRETEiJ_G0029726Trnt19967.749ENSELUG00000003802trnt19967.749Esox_lucius
MGP_SPRETEiJ_G0029726Trnt110089.862ENSFCAG00000026805TRNT19989.862Felis_catus
MGP_SPRETEiJ_G0029726Trnt18974.805ENSFALG00000013539TRNT110074.805Ficedula_albicollis
MGP_SPRETEiJ_G0029726Trnt19993.240ENSFDAG00000018412TRNT19993.240Fukomys_damarensis
MGP_SPRETEiJ_G0029726Trnt18777.835ENSFHEG00000019294trnt19967.612Fundulus_heteroclitus
MGP_SPRETEiJ_G0029726Trnt18379.330ENSGMOG00000007460trnt19667.568Gadus_morhua
MGP_SPRETEiJ_G0029726Trnt19672.771ENSGALG00000017368TRNT19672.771Gallus_gallus
MGP_SPRETEiJ_G0029726Trnt18380.447ENSGAFG00000008647trnt19668.873Gambusia_affinis
MGP_SPRETEiJ_G0029726Trnt18380.447ENSGACG00000011903trnt19668.325Gasterosteus_aculeatus
MGP_SPRETEiJ_G0029726Trnt19680.529ENSGAGG00000020942TRNT19580.529Gopherus_agassizii
MGP_SPRETEiJ_G0029726Trnt110092.857ENSGGOG00000015286TRNT110092.857Gorilla_gorilla
MGP_SPRETEiJ_G0029726Trnt19175.510ENSHBUG00000002797trnt19966.824Haplochromis_burtoni
MGP_SPRETEiJ_G0029726Trnt19992.774ENSHGLG00000003649TRNT19992.774Heterocephalus_glaber_female
MGP_SPRETEiJ_G0029726Trnt19987.209ENSHGLG00000000221-9987.209Heterocephalus_glaber_female
MGP_SPRETEiJ_G0029726Trnt19991.608ENSHGLG00100016421TRNT19991.608Heterocephalus_glaber_male
MGP_SPRETEiJ_G0029726Trnt18381.564ENSHCOG00000010618trnt19667.892Hippocampus_comes
MGP_SPRETEiJ_G0029726Trnt19373.367ENSIPUG00000000971trnt19966.279Ictalurus_punctatus
MGP_SPRETEiJ_G0029726Trnt19990.000ENSSTOG00000000150TRNT19992.647Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0029726Trnt19993.721ENSJJAG00000018561Trnt19993.721Jaculus_jaculus
MGP_SPRETEiJ_G0029726Trnt18776.923ENSKMAG00000011307trnt19967.453Kryptolebias_marmoratus
MGP_SPRETEiJ_G0029726Trnt19174.490ENSLBEG00000019457trnt19463.910Labrus_bergylta
MGP_SPRETEiJ_G0029726Trnt19673.494ENSLACG00000013227TRNT19673.494Latimeria_chalumnae
MGP_SPRETEiJ_G0029726Trnt19670.813ENSLOCG00000011105trnt19470.813Lepisosteus_oculatus
MGP_SPRETEiJ_G0029726Trnt110092.396ENSLAFG00000023191TRNT110092.396Loxodonta_africana
MGP_SPRETEiJ_G0029726Trnt19993.303ENSMFAG00000045113TRNT19993.303Macaca_fascicularis
MGP_SPRETEiJ_G0029726Trnt19993.303ENSMMUG00000017983TRNT19993.303Macaca_mulatta
MGP_SPRETEiJ_G0029726Trnt19993.303ENSMNEG00000037805TRNT19993.303Macaca_nemestrina
MGP_SPRETEiJ_G0029726Trnt18895.026ENSMLEG00000033671TRNT19995.026Mandrillus_leucophaeus
MGP_SPRETEiJ_G0029726Trnt19177.551ENSMAMG00000023401trnt19968.000Mastacembelus_armatus
MGP_SPRETEiJ_G0029726Trnt19175.510ENSMZEG00005009141trnt19966.824Maylandia_zebra
MGP_SPRETEiJ_G0029726Trnt17474.455ENSMGAG00000009971TRNT110074.455Meleagris_gallopavo
MGP_SPRETEiJ_G0029726Trnt110096.544ENSMAUG00000020707Trnt110096.544Mesocricetus_auratus
MGP_SPRETEiJ_G0029726Trnt19993.256ENSMICG00000016615TRNT19993.256Microcebus_murinus
MGP_SPRETEiJ_G0029726Trnt110096.083ENSMOCG00000004539Trnt110096.083Microtus_ochrogaster
MGP_SPRETEiJ_G0029726Trnt18679.348ENSMMOG00000010742trnt19768.039Mola_mola
MGP_SPRETEiJ_G0029726Trnt19983.953ENSMODG00000004368TRNT19983.953Monodelphis_domestica
MGP_SPRETEiJ_G0029726Trnt19175.000ENSMALG00000008376trnt19965.647Monopterus_albus
MGP_SPRETEiJ_G0029726Trnt1100100.000MGP_CAROLIEiJ_G0028698Trnt1100100.000Mus_caroli
MGP_SPRETEiJ_G0029726Trnt1100100.000ENSMUSG00000013736Trnt1100100.000Mus_musculus
MGP_SPRETEiJ_G0029726Trnt110098.157MGP_PahariEiJ_G0022449Trnt110098.522Mus_pahari
MGP_SPRETEiJ_G0029726Trnt110091.014ENSMPUG00000017017TRNT19991.014Mustela_putorius_furo
MGP_SPRETEiJ_G0029726Trnt18988.083ENSMLUG00000011864TRNT110088.083Myotis_lucifugus
MGP_SPRETEiJ_G0029726Trnt19994.419ENSNGAG00000000537Trnt19994.419Nannospalax_galili
MGP_SPRETEiJ_G0029726Trnt19175.510ENSNBRG00000023606trnt19966.377Neolamprologus_brichardi
MGP_SPRETEiJ_G0029726Trnt110093.318ENSNLEG00000003226TRNT110093.318Nomascus_leucogenys
MGP_SPRETEiJ_G0029726Trnt19983.488ENSMEUG00000004684TRNT19983.488Notamacropus_eugenii
MGP_SPRETEiJ_G0029726Trnt18880.157ENSOPRG00000015067TRNT19980.157Ochotona_princeps
MGP_SPRETEiJ_G0029726Trnt19991.455ENSODEG00000007597TRNT19991.455Octodon_degus
MGP_SPRETEiJ_G0029726Trnt19175.510ENSONIG00000020273trnt19867.059Oreochromis_niloticus
MGP_SPRETEiJ_G0029726Trnt19974.065ENSOANG00000007514TRNT19974.065Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0029726Trnt110085.484ENSOCUG00000008580TRNT19985.484Oryctolagus_cuniculus
MGP_SPRETEiJ_G0029726Trnt18877.368ENSORLG00000003165trnt19965.871Oryzias_latipes
MGP_SPRETEiJ_G0029726Trnt18877.368ENSORLG00020022060trnt19966.348Oryzias_latipes_hni
MGP_SPRETEiJ_G0029726Trnt18774.359ENSORLG00015018915trnt19964.623Oryzias_latipes_hsok
MGP_SPRETEiJ_G0029726Trnt19177.041ENSOMEG00000003331trnt19964.235Oryzias_melastigma
MGP_SPRETEiJ_G0029726Trnt110091.244ENSOARG00000008631TRNT19991.244Ovis_aries
MGP_SPRETEiJ_G0029726Trnt110092.857ENSPPAG00000043566TRNT110092.857Pan_paniscus
MGP_SPRETEiJ_G0029726Trnt19990.531ENSPPRG00000001327TRNT19990.531Panthera_pardus
MGP_SPRETEiJ_G0029726Trnt110090.323ENSPTIG00000011448TRNT19990.323Panthera_tigris_altaica
MGP_SPRETEiJ_G0029726Trnt110092.857ENSPTRG00000014564TRNT110092.857Pan_troglodytes
MGP_SPRETEiJ_G0029726Trnt19993.072ENSPANG00000025944TRNT19993.072Papio_anubis
MGP_SPRETEiJ_G0029726Trnt19869.070ENSPKIG00000020015trnt19969.070Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0029726Trnt19180.353ENSPSIG00000017356TRNT19981.944Pelodiscus_sinensis
MGP_SPRETEiJ_G0029726Trnt19174.490ENSPMGG00000008888trnt19866.353Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0029726Trnt110098.157ENSPEMG00000019845Trnt110098.157Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0029726Trnt110083.871ENSPCIG00000030436TRNT110083.871Phascolarctos_cinereus
MGP_SPRETEiJ_G0029726Trnt18380.447ENSPFOG00000006194trnt19668.873Poecilia_formosa
MGP_SPRETEiJ_G0029726Trnt18380.447ENSPLAG00000015623trnt19968.734Poecilia_latipinna
MGP_SPRETEiJ_G0029726Trnt18380.447ENSPMEG00000012216trnt19968.734Poecilia_mexicana
MGP_SPRETEiJ_G0029726Trnt18479.006ENSPREG00000021470trnt19668.780Poecilia_reticulata
MGP_SPRETEiJ_G0029726Trnt110093.548ENSPPYG00000013702TRNT110093.548Pongo_abelii
MGP_SPRETEiJ_G0029726Trnt18891.384ENSPCAG00000001951TRNT110091.384Procavia_capensis
MGP_SPRETEiJ_G0029726Trnt110092.627ENSPCOG00000022228TRNT110092.627Propithecus_coquereli
MGP_SPRETEiJ_G0029726Trnt18891.146ENSPVAG00000008784TRNT110091.146Pteropus_vampyrus
MGP_SPRETEiJ_G0029726Trnt19175.510ENSPNYG00000003120trnt19966.824Pundamilia_nyererei
MGP_SPRETEiJ_G0029726Trnt19768.009ENSPNAG00000000565trnt19768.009Pygocentrus_nattereri
MGP_SPRETEiJ_G0029726Trnt110097.696ENSRNOG00000006432Trnt110097.696Rattus_norvegicus
MGP_SPRETEiJ_G0029726Trnt110091.045ENSRBIG00000042632TRNT110090.553Rhinopithecus_bieti
MGP_SPRETEiJ_G0029726Trnt110092.857ENSRROG00000036866TRNT110092.857Rhinopithecus_roxellana
MGP_SPRETEiJ_G0029726Trnt110092.627ENSSBOG00000021208TRNT110092.627Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0029726Trnt19983.721ENSSHAG00000018861TRNT19983.721Sarcophilus_harrisii
MGP_SPRETEiJ_G0029726Trnt19471.253ENSSFOG00015020844trnt19471.253Scleropages_formosus
MGP_SPRETEiJ_G0029726Trnt19176.020ENSSMAG00000015432trnt19766.824Scophthalmus_maximus
MGP_SPRETEiJ_G0029726Trnt19175.510ENSSDUG00000012320trnt19966.118Seriola_dumerili
MGP_SPRETEiJ_G0029726Trnt15663.071ENSSLDG00000016463-9163.180Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0029726Trnt19175.510ENSSLDG00000009325trnt19966.118Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0029726Trnt18880.469ENSSPUG00000014153TRNT110080.469Sphenodon_punctatus
MGP_SPRETEiJ_G0029726Trnt19175.510ENSSPAG00000021005trnt19966.353Stegastes_partitus
MGP_SPRETEiJ_G0029726Trnt110091.244ENSSSCG00000011529TRNT110091.244Sus_scrofa
MGP_SPRETEiJ_G0029726Trnt19374.321ENSTGUG00000010192TRNT19974.321Taeniopygia_guttata
MGP_SPRETEiJ_G0029726Trnt18381.564ENSTRUG00000001088trnt19669.118Takifugu_rubripes
MGP_SPRETEiJ_G0029726Trnt18381.564ENSTNIG00000007363trnt19469.118Tetraodon_nigroviridis
MGP_SPRETEiJ_G0029726Trnt110086.567ENSTBEG00000006367TRNT110072.973Tupaia_belangeri
MGP_SPRETEiJ_G0029726Trnt110091.705ENSTTRG00000007803TRNT110091.705Tursiops_truncatus
MGP_SPRETEiJ_G0029726Trnt110090.092ENSUAMG00000022574TRNT19990.092Ursus_americanus
MGP_SPRETEiJ_G0029726Trnt110090.323ENSUMAG00000024092TRNT19990.323Ursus_maritimus
MGP_SPRETEiJ_G0029726Trnt110089.862ENSVVUG00000012810TRNT19989.862Vulpes_vulpes
MGP_SPRETEiJ_G0029726Trnt19864.802ENSXETG00000025091trnt19966.915Xenopus_tropicalis
MGP_SPRETEiJ_G0029726Trnt18380.447ENSXCOG00000010150trnt19668.627Xiphophorus_couchianus
MGP_SPRETEiJ_G0029726Trnt18379.888ENSXMAG00000002227trnt19668.137Xiphophorus_maculatus

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