EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0029740 (Gene tree)
Gene ID: -
Gene Symbol: Rad18
Alias: 2810024C04Rik
Full Name: RAD18 E3 ubiquitin protein ligase
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 72788 bases
Position: chr6:112486840-112559627
Accession: 1890476
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0078387	SAP	PF02037.27	6.5e-12	1	1
MGP_SPRETEiJ_P0078386	SAP	PF02037.27	6.8e-12	1	1
MGP_SPRETEiJ_P0078385	SAP	PF02037.27	7.6e-12	1	1
MGP_SPRETEiJ_P0078388	SAP	PF02037.27	7.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0078389	-	652	-	MGP_SPRETEiJ_P0078389	217 (aa)	-	-
MGP_SPRETEiJ_T0078388	-	2480	-	MGP_SPRETEiJ_P0078388	532 (aa)	-	-
MGP_SPRETEiJ_T0078392	-	1424	-	MGP_SPRETEiJ_P0078392	309 (aa)	-	-
MGP_SPRETEiJ_T0078393	-	2002	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0078390	-	3460	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0078391	-	588	-	MGP_SPRETEiJ_P0078391	157 (aa)	-	-
MGP_SPRETEiJ_T0078385	-	2480	-	MGP_SPRETEiJ_P0078385	485 (aa)	-	-
MGP_SPRETEiJ_T0078387	-	2111	-	MGP_SPRETEiJ_P0078387	428 (aa)	-	-
MGP_SPRETEiJ_T0078386	-	2195	-	MGP_SPRETEiJ_P0078386	449 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0029740's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0029740's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0029740	Rad18	100	77.670	ENSG00000070950	RAD18	100	90.110	Homo_sapiens
MGP_SPRETEiJ_G0029740	Rad18	98	42.059	ENSAPOG00000005260	rad18	83	41.905	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0029740	Rad18	100	77.684	ENSAMEG00000012375	RAD18	100	67.135	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0029740	Rad18	98	40.719	ENSACIG00000020655	rad18	95	40.000	Amphilophus_citrinellus
MGP_SPRETEiJ_G0029740	Rad18	98	43.402	ENSAOCG00000004507	rad18	86	40.371	Amphiprion_ocellaris
MGP_SPRETEiJ_G0029740	Rad18	98	44.282	ENSAPEG00000016837	rad18	92	43.026	Amphiprion_percula
MGP_SPRETEiJ_G0029740	Rad18	90	57.292	ENSAPLG00000003138	RAD18	91	46.723	Anas_platyrhynchos
MGP_SPRETEiJ_G0029740	Rad18	60	60.638	ENSACAG00000015168	-	99	71.127	Anolis_carolinensis
MGP_SPRETEiJ_G0029740	Rad18	98	76.898	ENSANAG00000033360	RAD18	100	69.963	Aotus_nancymaae
MGP_SPRETEiJ_G0029740	Rad18	98	43.491	ENSACLG00000023506	rad18	84	44.389	Astatotilapia_calliptera
MGP_SPRETEiJ_G0029740	Rad18	96	46.129	ENSAMXG00000002534	rad18	96	40.793	Astyanax_mexicanus
MGP_SPRETEiJ_G0029740	Rad18	100	75.658	ENSBTAG00000012142	RAD18	99	78.070	Bos_taurus
MGP_SPRETEiJ_G0029740	Rad18	98	76.238	ENSCJAG00000040303	RAD18	100	71.984	Callithrix_jacchus
MGP_SPRETEiJ_G0029740	Rad18	98	75.248	ENSCAFG00000005548	RAD18	100	68.588	Canis_familiaris
MGP_SPRETEiJ_G0029740	Rad18	98	75.248	ENSCAFG00020009228	RAD18	100	68.588	Canis_lupus_dingo
MGP_SPRETEiJ_G0029740	Rad18	100	75.219	ENSCHIG00000007965	RAD18	99	77.193	Capra_hircus
MGP_SPRETEiJ_G0029740	Rad18	98	74.917	ENSTSYG00000012189	RAD18	100	68.275	Carlito_syrichta
MGP_SPRETEiJ_G0029740	Rad18	95	70.606	ENSCAPG00000000356	RAD18	99	72.050	Cavia_aperea
MGP_SPRETEiJ_G0029740	Rad18	98	75.908	ENSCPOG00000013890	RAD18	100	68.016	Cavia_porcellus
MGP_SPRETEiJ_G0029740	Rad18	98	76.568	ENSCCAG00000022920	RAD18	100	70.149	Cebus_capucinus
MGP_SPRETEiJ_G0029740	Rad18	99	92.188	ENSCATG00000039277	RAD18	100	71.457	Cercocebus_atys
MGP_SPRETEiJ_G0029740	Rad18	98	74.587	ENSCLAG00000003652	RAD18	100	69.088	Chinchilla_lanigera
MGP_SPRETEiJ_G0029740	Rad18	98	76.568	ENSCSAG00000010783	RAD18	100	69.316	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0029740	Rad18	97	58.387	ENSCPBG00000014787	RAD18	99	50.499	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0029740	Rad18	98	75.578	ENSCANG00000007308	RAD18	100	69.460	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0029740	Rad18	100	90.423	ENSCGRG00001018154	-	99	92.398	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0029740	Rad18	98	87.582	ENSCGRG00001010209	-	100	78.672	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0029740	Rad18	100	90.423	ENSCGRG00000007283	-	99	92.398	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0029740	Rad18	98	87.908	ENSCGRG00000019636	-	100	78.873	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0029740	Rad18	98	45.277	ENSCSEG00000002516	rad18	78	45.856	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0029740	Rad18	98	46.541	ENSDARG00000027938	rad18	87	45.547	Danio_rerio
MGP_SPRETEiJ_G0029740	Rad18	98	79.208	ENSDNOG00000040055	RAD18	100	69.800	Dasypus_novemcinctus
MGP_SPRETEiJ_G0029740	Rad18	99	95.312	ENSDORG00000001099	Rad18	99	77.971	Dipodomys_ordii
MGP_SPRETEiJ_G0029740	Rad18	98	55.776	ENSETEG00000002268	RAD18	100	57.456	Echinops_telfairi
MGP_SPRETEiJ_G0029740	Rad18	98	80.858	ENSEASG00005013316	RAD18	94	72.461	Equus_asinus_asinus
MGP_SPRETEiJ_G0029740	Rad18	98	80.858	ENSECAG00000010746	RAD18	94	75.764	Equus_caballus
MGP_SPRETEiJ_G0029740	Rad18	98	66.667	ENSEEUG00000000236	-	73	68.944	Erinaceus_europaeus
MGP_SPRETEiJ_G0029740	Rad18	95	42.769	ENSELUG00000000733	rad18	86	39.858	Esox_lucius
MGP_SPRETEiJ_G0029740	Rad18	98	75.908	ENSFCAG00000025747	RAD18	100	69.331	Felis_catus
MGP_SPRETEiJ_G0029740	Rad18	95	57.525	ENSFALG00000013625	RAD18	86	55.039	Ficedula_albicollis
MGP_SPRETEiJ_G0029740	Rad18	98	76.316	ENSFDAG00000009907	RAD18	100	67.465	Fukomys_damarensis
MGP_SPRETEiJ_G0029740	Rad18	97	57.827	ENSGALG00000008368	RAD18	93	47.421	Gallus_gallus
MGP_SPRETEiJ_G0029740	Rad18	98	42.991	ENSGACG00000000920	rad18	80	43.617	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0029740	Rad18	87	58.123	ENSGAGG00000005184	RAD18	100	49.153	Gopherus_agassizii
MGP_SPRETEiJ_G0029740	Rad18	98	76.238	ENSGGOG00000008391	RAD18	100	69.963	Gorilla_gorilla
MGP_SPRETEiJ_G0029740	Rad18	83	46.512	ENSHBUG00000013322	rad18	83	47.040	Haplochromis_burtoni
MGP_SPRETEiJ_G0029740	Rad18	100	79.612	ENSHGLG00000009196	-	99	79.612	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0029740	Rad18	100	79.612	ENSHGLG00100017675	-	99	79.612	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0029740	Rad18	96	43.279	ENSIPUG00000018681	rad18	84	40.470	Ictalurus_punctatus
MGP_SPRETEiJ_G0029740	Rad18	100	78.964	ENSSTOG00000004870	-	99	78.964	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0029740	Rad18	100	80.266	ENSJJAG00000001484	Rad18	99	81.871	Jaculus_jaculus
MGP_SPRETEiJ_G0029740	Rad18	96	44.375	ENSKMAG00000020725	rad18	91	41.538	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0029740	Rad18	92	52.459	ENSLACG00000018437	RAD18	96	51.792	Latimeria_chalumnae
MGP_SPRETEiJ_G0029740	Rad18	98	48.693	ENSLOCG00000010629	rad18	95	43.856	Lepisosteus_oculatus
MGP_SPRETEiJ_G0029740	Rad18	89	90.625	ENSLAFG00000004667	RAD18	100	65.844	Loxodonta_africana
MGP_SPRETEiJ_G0029740	Rad18	98	75.578	ENSMFAG00000028864	RAD18	100	69.216	Macaca_fascicularis
MGP_SPRETEiJ_G0029740	Rad18	100	77.023	ENSMMUG00000020013	RAD18	99	77.023	Macaca_mulatta
MGP_SPRETEiJ_G0029740	Rad18	98	75.578	ENSMNEG00000013464	RAD18	100	69.216	Macaca_nemestrina
MGP_SPRETEiJ_G0029740	Rad18	92	92.188	ENSMLEG00000014306	RAD18	100	69.403	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0029740	Rad18	86	38.762	ENSMAMG00000023936	rad18	93	37.557	Mastacembelus_armatus
MGP_SPRETEiJ_G0029740	Rad18	98	43.195	ENSMZEG00005010577	rad18	73	44.140	Maylandia_zebra
MGP_SPRETEiJ_G0029740	Rad18	90	57.746	ENSMGAG00000010131	RAD18	91	46.042	Meleagris_gallopavo
MGP_SPRETEiJ_G0029740	Rad18	100	89.310	ENSMAUG00000020642	Rad18	99	92.105	Mesocricetus_auratus
MGP_SPRETEiJ_G0029740	Rad18	90	83.333	ENSMICG00000013536	RAD18	99	70.286	Microcebus_murinus
MGP_SPRETEiJ_G0029740	Rad18	99	95.312	ENSMOCG00000009114	Rad18	100	88.506	Microtus_ochrogaster
MGP_SPRETEiJ_G0029740	Rad18	100	40.974	ENSMMOG00000021793	rad18	98	41.818	Mola_mola
MGP_SPRETEiJ_G0029740	Rad18	98	64.495	ENSMODG00000004679	RAD18	88	56.263	Monodelphis_domestica
MGP_SPRETEiJ_G0029740	Rad18	100	95.556	MGP_CAROLIEiJ_G0028712	Rad18	100	95.556	Mus_caroli
MGP_SPRETEiJ_G0029740	Rad18	100	99.109	ENSMUSG00000030254	Rad18	100	99.109	Mus_musculus
MGP_SPRETEiJ_G0029740	Rad18	100	97.087	MGP_PahariEiJ_G0022463	Rad18	100	97.087	Mus_pahari
MGP_SPRETEiJ_G0029740	Rad18	98	77.888	ENSMPUG00000017063	RAD18	100	70.259	Mustela_putorius_furo
MGP_SPRETEiJ_G0029740	Rad18	92	85.915	ENSMLUG00000016494	RAD18	100	67.343	Myotis_lucifugus
MGP_SPRETEiJ_G0029740	Rad18	100	84.479	ENSNGAG00000012464	Rad18	100	86.550	Nannospalax_galili
MGP_SPRETEiJ_G0029740	Rad18	98	39.521	ENSNBRG00000004794	rad18	97	40.897	Neolamprologus_brichardi
MGP_SPRETEiJ_G0029740	Rad18	98	77.228	ENSNLEG00000003789	RAD18	100	70.243	Nomascus_leucogenys
MGP_SPRETEiJ_G0029740	Rad18	81	61.417	ENSMEUG00000003444	-	82	51.320	Notamacropus_eugenii
MGP_SPRETEiJ_G0029740	Rad18	98	71.617	ENSOPRG00000013856	RAD18	100	63.211	Ochotona_princeps
MGP_SPRETEiJ_G0029740	Rad18	96	78.451	ENSODEG00000018158	RAD18	97	78.451	Octodon_degus
MGP_SPRETEiJ_G0029740	Rad18	98	44.582	ENSONIG00000018979	rad18	84	44.615	Oreochromis_niloticus
MGP_SPRETEiJ_G0029740	Rad18	98	74.587	ENSOCUG00000000013	RAD18	100	65.985	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0029740	Rad18	96	39.939	ENSORLG00000029026	rad18	95	40.921	Oryzias_latipes
MGP_SPRETEiJ_G0029740	Rad18	98	77.451	ENSOGAG00000001410	RAD18	100	69.940	Otolemur_garnettii
MGP_SPRETEiJ_G0029740	Rad18	98	74.183	ENSOARG00000007445	RAD18	100	67.956	Ovis_aries
MGP_SPRETEiJ_G0029740	Rad18	98	76.898	ENSPPAG00000035797	RAD18	100	70.149	Pan_paniscus
MGP_SPRETEiJ_G0029740	Rad18	98	75.578	ENSPPRG00000004021	RAD18	100	69.145	Panthera_pardus
MGP_SPRETEiJ_G0029740	Rad18	98	75.578	ENSPTIG00000008602	RAD18	100	69.145	Panthera_tigris_altaica
MGP_SPRETEiJ_G0029740	Rad18	98	76.898	ENSPTRG00000014583	RAD18	100	70.101	Pan_troglodytes
MGP_SPRETEiJ_G0029740	Rad18	98	75.248	ENSPANG00000008855	RAD18	100	69.030	Papio_anubis
MGP_SPRETEiJ_G0029740	Rad18	97	58.632	ENSPSIG00000006928	RAD18	99	49.703	Pelodiscus_sinensis
MGP_SPRETEiJ_G0029740	Rad18	98	43.492	ENSPMGG00000013294	rad18	95	40.893	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0029740	Rad18	98	90.429	ENSPEMG00000022129	Rad18	99	91.520	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0029740	Rad18	96	64.238	ENSPCIG00000024872	RAD18	92	58.597	Phascolarctos_cinereus
MGP_SPRETEiJ_G0029740	Rad18	96	41.590	ENSPFOG00000002722	rad18	96	43.478	Poecilia_formosa
MGP_SPRETEiJ_G0029740	Rad18	98	77.228	ENSPPYG00000013688	RAD18	100	69.963	Pongo_abelii
MGP_SPRETEiJ_G0029740	Rad18	96	62.416	ENSPCAG00000008229	RAD18	100	55.240	Procavia_capensis
MGP_SPRETEiJ_G0029740	Rad18	92	95.312	ENSPVAG00000012220	RAD18	100	69.216	Pteropus_vampyrus
MGP_SPRETEiJ_G0029740	Rad18	98	43.195	ENSPNYG00000006815	rad18	78	44.140	Pundamilia_nyererei
MGP_SPRETEiJ_G0029740	Rad18	98	41.593	ENSPNAG00000016082	rad18	85	40.741	Pygocentrus_nattereri
MGP_SPRETEiJ_G0029740	Rad18	98	93.729	ENSRNOG00000005907	Rad18	100	86.561	Rattus_norvegicus
MGP_SPRETEiJ_G0029740	Rad18	98	74.257	ENSRBIG00000044173	RAD18	100	68.529	Rhinopithecus_bieti
MGP_SPRETEiJ_G0029740	Rad18	98	76.238	ENSRROG00000043948	RAD18	100	70.492	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0029740	Rad18	98	76.898	ENSSBOG00000008434	-	100	69.776	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0029740	Rad18	95	57.047	ENSSHAG00000012472	-	90	59.726	Sarcophilus_harrisii
MGP_SPRETEiJ_G0029740	Rad18	98	45.253	ENSSFOG00015019264	rad18	76	46.092	Scleropages_formosus
MGP_SPRETEiJ_G0029740	Rad18	95	59.459	ENSSPUG00000017486	RAD18	97	59.459	Sphenodon_punctatus
MGP_SPRETEiJ_G0029740	Rad18	98	42.690	ENSSPAG00000007165	rad18	79	43.704	Stegastes_partitus
MGP_SPRETEiJ_G0029740	Rad18	98	75.658	ENSSSCG00000026158	RAD18	100	68.831	Sus_scrofa
MGP_SPRETEiJ_G0029740	Rad18	92	54.452	ENSTGUG00000010405	RAD18	82	53.533	Taeniopygia_guttata
MGP_SPRETEiJ_G0029740	Rad18	95	43.131	ENSTRUG00000003517	rad18	97	43.785	Takifugu_rubripes
MGP_SPRETEiJ_G0029740	Rad18	98	45.886	ENSTNIG00000014625	rad18	100	45.699	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0029740	Rad18	98	77.888	ENSTTRG00000005034	RAD18	100	70.281	Tursiops_truncatus
MGP_SPRETEiJ_G0029740	Rad18	91	60.357	ENSUAMG00000009763	-	84	59.717	Ursus_americanus
MGP_SPRETEiJ_G0029740	Rad18	98	77.228	ENSUMAG00000019279	RAD18	100	69.922	Ursus_maritimus
MGP_SPRETEiJ_G0029740	Rad18	96	77.703	ENSVPAG00000002063	RAD18	100	64.414	Vicugna_pacos
MGP_SPRETEiJ_G0029740	Rad18	98	74.917	ENSVVUG00000025318	RAD18	100	75.758	Vulpes_vulpes
MGP_SPRETEiJ_G0029740	Rad18	95	52.733	ENSXETG00000033878	RAD18	99	53.886	Xenopus_tropicalis
MGP_SPRETEiJ_G0029740	Rad18	96	37.920	ENSXCOG00000020018	rad18	94	39.946	Xiphophorus_couchianus
MGP_SPRETEiJ_G0029740	Rad18	96	38.226	ENSXMAG00000001516	rad18	94	40.217	Xiphophorus_maculatus