EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0029816 (Gene tree)
Gene ID: -
Gene Symbol: Bms1
Alias: Bms1l
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 37757 bases
Position: chr6:118365470-118403226
Accession: 2446132
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0078810	AARP2CN	PF08142.12	1.4e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0078811	-	3049	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0078810	-	4321	-	MGP_SPRETEiJ_P0078810	1284 (aa)	-	-
MGP_SPRETEiJ_T0078812	-	398	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0029816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0029816's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0029816	Bms1	99	84.759	ENSG00000165733	BMS1	99	85.148	Homo_sapiens
MGP_SPRETEiJ_G0029816	Bms1	72	70.934	ENSAPOG00000002296	bms1	99	58.711	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0029816	Bms1	100	84.121	ENSAMEG00000016834	BMS1	99	84.520	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0029816	Bms1	82	79.019	ENSACIG00000002588	bms1	90	77.519	Amphilophus_citrinellus
MGP_SPRETEiJ_G0029816	Bms1	85	69.895	ENSAOCG00000018088	bms1	99	60.737	Amphiprion_ocellaris
MGP_SPRETEiJ_G0029816	Bms1	82	71.076	ENSAPEG00000014673	bms1	98	60.761	Amphiprion_percula
MGP_SPRETEiJ_G0029816	Bms1	81	73.611	ENSATEG00000023465	bms1	55	63.047	Anabas_testudineus
MGP_SPRETEiJ_G0029816	Bms1	96	71.268	ENSAPLG00000003759	BMS1	99	72.186	Anas_platyrhynchos
MGP_SPRETEiJ_G0029816	Bms1	99	69.438	ENSACAG00000004537	-	99	69.992	Anolis_carolinensis
MGP_SPRETEiJ_G0029816	Bms1	99	84.071	ENSANAG00000023432	BMS1	99	84.926	Aotus_nancymaae
MGP_SPRETEiJ_G0029816	Bms1	87	66.469	ENSACLG00000001294	bms1	98	60.859	Astatotilapia_calliptera
MGP_SPRETEiJ_G0029816	Bms1	99	84.693	ENSBTAG00000012878	BMS1	99	84.305	Bos_taurus
MGP_SPRETEiJ_G0029816	Bms1	79	51.932	WBGene00022021	Y61A9LA.10	96	52.300	Caenorhabditis_elegans
MGP_SPRETEiJ_G0029816	Bms1	99	84.837	ENSCJAG00000021705	BMS1	99	85.070	Callithrix_jacchus
MGP_SPRETEiJ_G0029816	Bms1	99	84.460	ENSCAFG00000007114	BMS1	99	84.538	Canis_familiaris
MGP_SPRETEiJ_G0029816	Bms1	99	84.460	ENSCAFG00020025282	BMS1	99	84.538	Canis_lupus_dingo
MGP_SPRETEiJ_G0029816	Bms1	99	84.215	ENSCHIG00000023251	BMS1	99	83.826	Capra_hircus
MGP_SPRETEiJ_G0029816	Bms1	99	80.811	ENSCAPG00000008652	BMS1	99	80.281	Cavia_aperea
MGP_SPRETEiJ_G0029816	Bms1	99	84.555	ENSCPOG00000000502	BMS1	99	84.022	Cavia_porcellus
MGP_SPRETEiJ_G0029816	Bms1	99	70.008	ENSCCAG00000024969	-	99	70.474	Cebus_capucinus
MGP_SPRETEiJ_G0029816	Bms1	90	64.619	ENSCATG00000008695	-	96	63.976	Cercocebus_atys
MGP_SPRETEiJ_G0029816	Bms1	99	84.914	ENSCATG00000030625	-	99	84.914	Cercocebus_atys
MGP_SPRETEiJ_G0029816	Bms1	99	84.801	ENSCLAG00000002446	BMS1	99	84.268	Chinchilla_lanigera
MGP_SPRETEiJ_G0029816	Bms1	99	85.537	ENSCSAG00000011118	BMS1	99	85.537	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0029816	Bms1	99	82.389	ENSCHOG00000011055	BMS1	99	82.234	Choloepus_hoffmanni
MGP_SPRETEiJ_G0029816	Bms1	99	72.205	ENSCPBG00000025581	BMS1	98	72.608	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0029816	Bms1	79	58.596	ENSCING00000003181	-	96	58.867	Ciona_intestinalis
MGP_SPRETEiJ_G0029816	Bms1	68	53.976	ENSCSAVG00000004113	-	88	53.738	Ciona_savignyi
MGP_SPRETEiJ_G0029816	Bms1	99	86.159	ENSCANG00000011609	BMS1	99	85.303	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0029816	Bms1	99	90.831	ENSCGRG00001019461	Bms1	99	90.598	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0029816	Bms1	99	90.831	ENSCGRG00000009016	Bms1	99	90.598	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0029816	Bms1	82	73.412	ENSCSEG00000002469	bms1	98	60.573	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0029816	Bms1	85	67.040	ENSCVAG00000008371	bms1	98	66.341	Cyprinodon_variegatus
MGP_SPRETEiJ_G0029816	Bms1	99	83.527	ENSDNOG00000015761	BMS1	99	82.895	Dasypus_novemcinctus
MGP_SPRETEiJ_G0029816	Bms1	99	84.837	ENSDORG00000002982	Bms1	99	84.914	Dipodomys_ordii
MGP_SPRETEiJ_G0029816	Bms1	77	60.267	FBgn0036686	CG7728	98	58.853	Drosophila_melanogaster
MGP_SPRETEiJ_G0029816	Bms1	86	83.036	ENSETEG00000009554	BMS1	91	83.036	Echinops_telfairi
MGP_SPRETEiJ_G0029816	Bms1	99	84.305	ENSEASG00005006894	BMS1	99	84.771	Equus_asinus_asinus
MGP_SPRETEiJ_G0029816	Bms1	99	84.460	ENSECAG00000001358	BMS1	99	84.926	Equus_caballus
MGP_SPRETEiJ_G0029816	Bms1	84	73.138	ENSELUG00000001756	bms1	98	66.667	Esox_lucius
MGP_SPRETEiJ_G0029816	Bms1	100	85.248	ENSFCAG00000011220	BMS1	99	85.016	Felis_catus
MGP_SPRETEiJ_G0029816	Bms1	99	70.770	ENSFALG00000006882	BMS1	99	70.995	Ficedula_albicollis
MGP_SPRETEiJ_G0029816	Bms1	99	83.022	ENSFDAG00000001422	BMS1	99	82.059	Fukomys_damarensis
MGP_SPRETEiJ_G0029816	Bms1	85	68.182	ENSFHEG00000003367	bms1	98	61.460	Fundulus_heteroclitus
MGP_SPRETEiJ_G0029816	Bms1	93	64.510	ENSGMOG00000000718	bms1	95	75.000	Gadus_morhua
MGP_SPRETEiJ_G0029816	Bms1	99	71.330	ENSGALG00000002624	BMS1	99	71.836	Gallus_gallus
MGP_SPRETEiJ_G0029816	Bms1	99	58.737	ENSGACG00000015334	bms1	99	59.302	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0029816	Bms1	99	72.248	ENSGAGG00000003467	BMS1	99	71.904	Gopherus_agassizii
MGP_SPRETEiJ_G0029816	Bms1	87	66.190	ENSHBUG00000022628	bms1	98	60.955	Haplochromis_burtoni
MGP_SPRETEiJ_G0029816	Bms1	99	82.215	ENSHGLG00000000477	BMS1	99	81.705	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0029816	Bms1	99	82.293	ENSHGLG00100002176	BMS1	99	81.783	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0029816	Bms1	90	66.071	ENSHCOG00000017604	bms1	99	59.704	Hippocampus_comes
MGP_SPRETEiJ_G0029816	Bms1	59	71.493	ENSIPUG00000017855	bms1	99	61.204	Ictalurus_punctatus
MGP_SPRETEiJ_G0029816	Bms1	99	85.303	ENSSTOG00000015063	BMS1	99	84.992	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0029816	Bms1	99	85.035	ENSJJAG00000017328	Bms1	99	83.734	Jaculus_jaculus
MGP_SPRETEiJ_G0029816	Bms1	57	64.140	ENSKMAG00000021982	bms1	89	65.743	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0029816	Bms1	82	70.843	ENSLBEG00000028208	bms1	98	59.892	Labrus_bergylta
MGP_SPRETEiJ_G0029816	Bms1	99	60.849	ENSLACG00000001600	BMS1	100	61.290	Latimeria_chalumnae
MGP_SPRETEiJ_G0029816	Bms1	84	74.382	ENSLOCG00000012914	bms1	99	63.475	Lepisosteus_oculatus
MGP_SPRETEiJ_G0029816	Bms1	99	82.129	ENSLAFG00000006250	BMS1	99	81.740	Loxodonta_africana
MGP_SPRETEiJ_G0029816	Bms1	82	87.427	ENSMFAG00000037771	BMS1	97	88.201	Macaca_fascicularis
MGP_SPRETEiJ_G0029816	Bms1	90	72.476	ENSMMUG00000007426	-	98	71.576	Macaca_mulatta
MGP_SPRETEiJ_G0029816	Bms1	85	66.697	ENSMLEG00000029084	-	97	66.758	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0029816	Bms1	99	61.985	ENSMAMG00000020855	bms1	90	69.816	Mastacembelus_armatus
MGP_SPRETEiJ_G0029816	Bms1	88	65.680	ENSMZEG00005005663	bms1	98	60.703	Maylandia_zebra
MGP_SPRETEiJ_G0029816	Bms1	95	70.272	ENSMGAG00000001170	BMS1	99	70.669	Meleagris_gallopavo
MGP_SPRETEiJ_G0029816	Bms1	99	90.676	ENSMAUG00000002195	Bms1	99	90.287	Mesocricetus_auratus
MGP_SPRETEiJ_G0029816	Bms1	99	83.876	ENSMICG00000009977	BMS1	99	83.876	Microcebus_murinus
MGP_SPRETEiJ_G0029816	Bms1	99	89.867	ENSMOCG00000002038	Bms1	99	89.556	Microtus_ochrogaster
MGP_SPRETEiJ_G0029816	Bms1	85	67.149	ENSMMOG00000000977	bms1	93	73.759	Mola_mola
MGP_SPRETEiJ_G0029816	Bms1	99	76.439	ENSMODG00000001177	BMS1	99	76.201	Monodelphis_domestica
MGP_SPRETEiJ_G0029816	Bms1	88	73.243	ENSMALG00000009680	bms1	98	60.078	Monopterus_albus
MGP_SPRETEiJ_G0029816	Bms1	74	98.544	MGP_CAROLIEiJ_G0028785	-	86	98.544	Mus_caroli
MGP_SPRETEiJ_G0029816	Bms1	99	98.987	ENSMUSG00000030138	Bms1	99	98.987	Mus_musculus
MGP_SPRETEiJ_G0029816	Bms1	99	95.401	MGP_PahariEiJ_G0022539	Bms1	99	95.401	Mus_pahari
MGP_SPRETEiJ_G0029816	Bms1	100	84.324	ENSMPUG00000017276	BMS1	99	83.026	Mustela_putorius_furo
MGP_SPRETEiJ_G0029816	Bms1	99	83.904	ENSMLUG00000003260	BMS1	99	83.748	Myotis_lucifugus
MGP_SPRETEiJ_G0029816	Bms1	99	83.359	ENSNLEG00000015791	BMS1	99	83.437	Nomascus_leucogenys
MGP_SPRETEiJ_G0029816	Bms1	81	94.286	ENSOPRG00000005195	BMS1	81	94.286	Ochotona_princeps
MGP_SPRETEiJ_G0029816	Bms1	99	83.554	ENSODEG00000005554	BMS1	99	83.658	Octodon_degus
MGP_SPRETEiJ_G0029816	Bms1	90	66.879	ENSONIG00000007227	bms1	98	61.502	Oreochromis_niloticus
MGP_SPRETEiJ_G0029816	Bms1	99	74.109	ENSOANG00000000662	-	99	73.793	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0029816	Bms1	99	84.591	ENSOCUG00000005354	BMS1	99	84.603	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0029816	Bms1	88	66.507	ENSORLG00000014655	bms1	98	61.460	Oryzias_latipes
MGP_SPRETEiJ_G0029816	Bms1	88	66.774	ENSORLG00020016246	bms1	98	60.849	Oryzias_latipes_hni
MGP_SPRETEiJ_G0029816	Bms1	88	66.613	ENSORLG00015014183	bms1	98	61.242	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0029816	Bms1	88	67.573	ENSOMEG00000015042	bms1	56	62.447	Oryzias_melastigma
MGP_SPRETEiJ_G0029816	Bms1	99	85.116	ENSOGAG00000006511	BMS1	99	85.271	Otolemur_garnettii
MGP_SPRETEiJ_G0029816	Bms1	99	84.031	ENSOARG00000003900	BMS1	99	83.643	Ovis_aries
MGP_SPRETEiJ_G0029816	Bms1	99	81.274	ENSPPAG00000027837	BMS1	99	81.197	Pan_paniscus
MGP_SPRETEiJ_G0029816	Bms1	100	85.404	ENSPPRG00000001311	BMS1	99	84.938	Panthera_pardus
MGP_SPRETEiJ_G0029816	Bms1	100	83.618	ENSPTIG00000009652	BMS1	99	83.540	Panthera_tigris_altaica
MGP_SPRETEiJ_G0029816	Bms1	99	84.926	ENSPTRG00000002441	BMS1	99	85.226	Pan_troglodytes
MGP_SPRETEiJ_G0029816	Bms1	99	71.559	ENSPSIG00000006481	BMS1	98	72.833	Pelodiscus_sinensis
MGP_SPRETEiJ_G0029816	Bms1	99	82.828	ENSPEMG00000022467	Bms1	99	83.294	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0029816	Bms1	95	91.275	ENSPCIG00000001339	BMS1	98	85.634	Phascolarctos_cinereus
MGP_SPRETEiJ_G0029816	Bms1	86	65.145	ENSPFOG00000015180	bms1	99	61.026	Poecilia_formosa
MGP_SPRETEiJ_G0029816	Bms1	85	66.396	ENSPMEG00000023176	bms1	93	62.157	Poecilia_mexicana
MGP_SPRETEiJ_G0029816	Bms1	79	72.372	ENSPREG00000002695	bms1	98	59.593	Poecilia_reticulata
MGP_SPRETEiJ_G0029816	Bms1	61	80.077	ENSPPYG00000002836	-	99	80.587	Pongo_abelii
MGP_SPRETEiJ_G0029816	Bms1	73	93.878	ENSPCAG00000014528	BMS1	73	93.878	Procavia_capensis
MGP_SPRETEiJ_G0029816	Bms1	95	80.226	ENSPCOG00000023834	-	99	80.468	Propithecus_coquereli
MGP_SPRETEiJ_G0029816	Bms1	99	82.101	ENSPVAG00000000725	BMS1	99	82.023	Pteropus_vampyrus
MGP_SPRETEiJ_G0029816	Bms1	87	66.990	ENSPNYG00000018866	bms1	98	60.924	Pundamilia_nyererei
MGP_SPRETEiJ_G0029816	Bms1	82	91.238	ENSRNOG00000006576	Bms1	100	91.429	Rattus_norvegicus
MGP_SPRETEiJ_G0029816	Bms1	99	83.593	ENSRROG00000040101	BMS1	99	83.359	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0029816	Bms1	76	45.298	YPL217C	-	80	48.174	Saccharomyces_cerevisiae
MGP_SPRETEiJ_G0029816	Bms1	99	84.914	ENSSBOG00000035778	BMS1	99	86.081	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0029816	Bms1	99	75.229	ENSSHAG00000005062	BMS1	99	75.133	Sarcophilus_harrisii
MGP_SPRETEiJ_G0029816	Bms1	99	59.819	ENSSFOG00015022313	bms1	99	60.245	Scleropages_formosus
MGP_SPRETEiJ_G0029816	Bms1	90	65.916	ENSSMAG00000019966	bms1	98	60.277	Scophthalmus_maximus
MGP_SPRETEiJ_G0029816	Bms1	88	67.476	ENSSDUG00000016875	bms1	98	60.496	Seriola_dumerili
MGP_SPRETEiJ_G0029816	Bms1	70	72.111	ENSSARG00000014407	BMS1	100	71.319	Sorex_araneus
MGP_SPRETEiJ_G0029816	Bms1	99	70.941	ENSSPUG00000014454	BMS1	99	70.008	Sphenodon_punctatus
MGP_SPRETEiJ_G0029816	Bms1	99	85.047	ENSSSCG00000010198	BMS1	99	85.125	Sus_scrofa
MGP_SPRETEiJ_G0029816	Bms1	99	71.429	ENSTGUG00000006302	-	99	71.330	Taeniopygia_guttata
MGP_SPRETEiJ_G0029816	Bms1	87	63.968	ENSTRUG00000008028	bms1	94	63.564	Takifugu_rubripes
MGP_SPRETEiJ_G0029816	Bms1	99	59.116	ENSTNIG00000006216	bms1	99	58.268	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0029816	Bms1	60	90.169	ENSTBEG00000001673	-	64	88.562	Tupaia_belangeri
MGP_SPRETEiJ_G0029816	Bms1	99	81.726	ENSTTRG00000007983	BMS1	99	81.493	Tursiops_truncatus
MGP_SPRETEiJ_G0029816	Bms1	100	84.860	ENSUAMG00000023996	BMS1	99	84.705	Ursus_americanus
MGP_SPRETEiJ_G0029816	Bms1	100	84.705	ENSUMAG00000016523	BMS1	99	84.550	Ursus_maritimus
MGP_SPRETEiJ_G0029816	Bms1	88	77.807	ENSVPAG00000007477	BMS1	94	91.577	Vicugna_pacos
MGP_SPRETEiJ_G0029816	Bms1	99	84.460	ENSVVUG00000021305	BMS1	99	84.538	Vulpes_vulpes
MGP_SPRETEiJ_G0029816	Bms1	98	63.887	ENSXETG00000008158	bms1	99	64.192	Xenopus_tropicalis
MGP_SPRETEiJ_G0029816	Bms1	86	66.253	ENSXCOG00000000506	bms1	93	75.443	Xiphophorus_couchianus
MGP_SPRETEiJ_G0029816	Bms1	85	65.747	ENSXMAG00000014236	bms1	98	59.563	Xiphophorus_maculatus