EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0030085 (Gene tree)
Gene ID: -
Gene Symbol: Recql
Alias: RecQ1
Full Name: RecQ protein-like
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 38878 bases
Position: chr6:143583046-143621923
Accession: 103021
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0079968	ResIII	PF04851.15	2.7e-05	1	1
MGP_SPRETEiJ_P0079966	ResIII	PF04851.15	2.7e-05	1	1
MGP_SPRETEiJ_P0079971	ResIII	PF04851.15	2.7e-05	1	1
MGP_SPRETEiJ_P0079968	DEAD	PF00270.29	3e-17	1	1
MGP_SPRETEiJ_P0079966	DEAD	PF00270.29	3e-17	1	1
MGP_SPRETEiJ_P0079971	DEAD	PF00270.29	3.2e-17	1	1
MGP_SPRETEiJ_P0079976	DEAD	PF00270.29	4.8e-10	1	1
MGP_SPRETEiJ_P0079977	DEAD	PF00270.29	4.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0079966	-	2111	-	MGP_SPRETEiJ_P0079966	631 (aa)	-	-
MGP_SPRETEiJ_T0079974	-	667	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0079977	-	711	-	MGP_SPRETEiJ_P0079977	167 (aa)	-	-
MGP_SPRETEiJ_T0079976	-	825	-	MGP_SPRETEiJ_P0079976	167 (aa)	-	-
MGP_SPRETEiJ_T0079971	-	3602	-	MGP_SPRETEiJ_P0079971	648 (aa)	-	-
MGP_SPRETEiJ_T0079970	-	677	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0079973	-	783	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0079972	-	335	-	MGP_SPRETEiJ_P0079972	62 (aa)	-	-
MGP_SPRETEiJ_T0079978	-	349	-	MGP_SPRETEiJ_P0079978	85 (aa)	-	-
MGP_SPRETEiJ_T0079968	-	3083	-	MGP_SPRETEiJ_P0079968	634 (aa)	-	-
MGP_SPRETEiJ_T0079969	-	3730	-	MGP_SPRETEiJ_P0079969	234 (aa)	-	-
MGP_SPRETEiJ_T0079975	-	320	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0030085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0030085's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0030085	Recql	65	37.931	MGP_SPRETEiJ_G0018265	Recql5	80	46.835

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0030085	Recql	100	86.228	ENSG00000004700	RECQL	100	87.437	Homo_sapiens
MGP_SPRETEiJ_G0030085	Recql	57	60.417	ENSAPOG00000021194	-	84	50.222	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0030085	Recql	100	81.636	ENSAMEG00000016233	RECQL	100	81.636	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0030085	Recql	92	58.953	ENSACIG00000020781	recql	93	59.022	Amphilophus_citrinellus
MGP_SPRETEiJ_G0030085	Recql	98	56.220	ENSAOCG00000010244	recql	97	56.290	Amphiprion_ocellaris
MGP_SPRETEiJ_G0030085	Recql	98	54.717	ENSAPEG00000002040	recql	97	55.450	Amphiprion_percula
MGP_SPRETEiJ_G0030085	Recql	97	56.459	ENSATEG00000023342	recql	98	57.188	Anabas_testudineus
MGP_SPRETEiJ_G0030085	Recql	99	71.894	ENSAPLG00000003404	RECQL	97	72.884	Anas_platyrhynchos
MGP_SPRETEiJ_G0030085	Recql	99	70.909	ENSACAG00000017383	RECQL	99	78.492	Anolis_carolinensis
MGP_SPRETEiJ_G0030085	Recql	99	86.334	ENSANAG00000035372	RECQL	99	85.648	Aotus_nancymaae
MGP_SPRETEiJ_G0030085	Recql	94	57.781	ENSACLG00000021416	recql	99	54.006	Astatotilapia_calliptera
MGP_SPRETEiJ_G0030085	Recql	98	57.576	ENSAMXG00000014249	recql	95	56.897	Astyanax_mexicanus
MGP_SPRETEiJ_G0030085	Recql	100	83.234	ENSBTAG00000021083	RECQL	100	82.589	Bos_taurus
MGP_SPRETEiJ_G0030085	Recql	96	44.951	WBGene00019334	K02F3.12	98	44.951	Caenorhabditis_elegans
MGP_SPRETEiJ_G0030085	Recql	100	86.228	ENSCJAG00000044420	RECQL	100	84.746	Callithrix_jacchus
MGP_SPRETEiJ_G0030085	Recql	99	83.601	ENSCAFG00000012221	RECQL	100	82.407	Canis_familiaris
MGP_SPRETEiJ_G0030085	Recql	99	83.601	ENSCAFG00020007872	RECQL	100	82.407	Canis_lupus_dingo
MGP_SPRETEiJ_G0030085	Recql	100	83.234	ENSCHIG00000024281	RECQL	100	82.126	Capra_hircus
MGP_SPRETEiJ_G0030085	Recql	100	86.826	ENSTSYG00000009224	RECQL	100	84.746	Carlito_syrichta
MGP_SPRETEiJ_G0030085	Recql	100	86.826	ENSCPOG00000024644	RECQL	99	85.957	Cavia_porcellus
MGP_SPRETEiJ_G0030085	Recql	100	86.826	ENSCCAG00000028085	RECQL	100	86.133	Cebus_capucinus
MGP_SPRETEiJ_G0030085	Recql	100	87.425	ENSCATG00000036038	RECQL	100	85.978	Cercocebus_atys
MGP_SPRETEiJ_G0030085	Recql	100	85.031	ENSCLAG00000014618	RECQL	100	85.031	Chinchilla_lanigera
MGP_SPRETEiJ_G0030085	Recql	100	87.425	ENSCSAG00000007974	RECQL	100	85.516	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0030085	Recql	100	82.635	ENSCHOG00000002452	RECQL	90	83.133	Choloepus_hoffmanni
MGP_SPRETEiJ_G0030085	Recql	95	77.414	ENSCPBG00000009109	RECQL	99	73.354	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0030085	Recql	99	39.412	ENSCING00000004012	-	92	46.679	Ciona_intestinalis
MGP_SPRETEiJ_G0030085	Recql	96	41.615	ENSCSAVG00000011052	-	99	42.334	Ciona_savignyi
MGP_SPRETEiJ_G0030085	Recql	100	86.826	ENSCANG00000035259	RECQL	100	85.516	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0030085	Recql	100	90.432	ENSCGRG00001015141	Recql	100	90.432	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0030085	Recql	100	90.432	ENSCGRG00000003545	Recql	100	90.432	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0030085	Recql	96	55.556	ENSCSEG00000015932	recql	96	56.457	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0030085	Recql	93	59.291	ENSCVAG00000014613	recql	96	58.512	Cyprinodon_variegatus
MGP_SPRETEiJ_G0030085	Recql	99	56.875	ENSDARG00000007175	recql	99	56.522	Danio_rerio
MGP_SPRETEiJ_G0030085	Recql	100	84.431	ENSDNOG00000013557	RECQL	99	88.174	Dasypus_novemcinctus
MGP_SPRETEiJ_G0030085	Recql	100	80.240	ENSDORG00000015884	Recql	100	80.240	Dipodomys_ordii
MGP_SPRETEiJ_G0030085	Recql	96	61.491	ENSETEG00000018325	-	63	74.839	Echinops_telfairi
MGP_SPRETEiJ_G0030085	Recql	96	82.609	ENSETEG00000018631	-	99	75.389	Echinops_telfairi
MGP_SPRETEiJ_G0030085	Recql	99	80.128	ENSEASG00005014041	RECQL	95	87.576	Equus_asinus_asinus
MGP_SPRETEiJ_G0030085	Recql	100	81.972	ENSECAG00000024762	RECQL	87	81.972	Equus_caballus
MGP_SPRETEiJ_G0030085	Recql	98	58.095	ENSELUG00000011528	recql	97	58.095	Esox_lucius
MGP_SPRETEiJ_G0030085	Recql	100	83.025	ENSFCAG00000030888	RECQL	99	83.025	Felis_catus
MGP_SPRETEiJ_G0030085	Recql	96	72.112	ENSFALG00000002635	RECQL	98	70.728	Ficedula_albicollis
MGP_SPRETEiJ_G0030085	Recql	100	85.629	ENSFDAG00000019693	RECQL	100	85.031	Fukomys_damarensis
MGP_SPRETEiJ_G0030085	Recql	99	56.426	ENSFHEG00000014563	recql	99	57.008	Fundulus_heteroclitus
MGP_SPRETEiJ_G0030085	Recql	80	58.383	ENSGMOG00000010504	recql	100	58.383	Gadus_morhua
MGP_SPRETEiJ_G0030085	Recql	99	73.089	ENSGALG00000013174	RECQL	98	71.889	Gallus_gallus
MGP_SPRETEiJ_G0030085	Recql	99	54.531	ENSGACG00000001005	recql	98	56.973	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0030085	Recql	99	74.303	ENSGAGG00000025428	RECQL	97	74.303	Gopherus_agassizii
MGP_SPRETEiJ_G0030085	Recql	100	85.030	ENSGGOG00000010985	RECQL	100	84.746	Gorilla_gorilla
MGP_SPRETEiJ_G0030085	Recql	98	56.426	ENSHBUG00000001341	recql	99	56.786	Haplochromis_burtoni
MGP_SPRETEiJ_G0030085	Recql	99	86.656	ENSHGLG00000009712	RECQL	100	85.340	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0030085	Recql	98	86.430	ENSHGLG00100015306	RECQL	100	85.116	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0030085	Recql	99	56.661	ENSHCOG00000012735	recql	97	56.661	Hippocampus_comes
MGP_SPRETEiJ_G0030085	Recql	90	60.315	ENSIPUG00000024092	recql	99	53.448	Ictalurus_punctatus
MGP_SPRETEiJ_G0030085	Recql	99	81.153	ENSSTOG00000006328	RECQL	100	81.153	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0030085	Recql	98	87.117	ENSJJAG00000017339	Recql	100	84.245	Jaculus_jaculus
MGP_SPRETEiJ_G0030085	Recql	97	54.690	ENSKMAG00000011232	recql	98	54.460	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0030085	Recql	98	56.082	ENSLBEG00000023652	recql	97	55.538	Labrus_bergylta
MGP_SPRETEiJ_G0030085	Recql	99	68.254	ENSLACG00000011482	RECQL	99	67.442	Latimeria_chalumnae
MGP_SPRETEiJ_G0030085	Recql	100	54.167	ENSLOCG00000015393	recql	98	52.006	Lepisosteus_oculatus
MGP_SPRETEiJ_G0030085	Recql	99	83.826	ENSLAFG00000000963	RECQL	99	83.826	Loxodonta_africana
MGP_SPRETEiJ_G0030085	Recql	100	87.425	ENSMFAG00000031470	RECQL	100	85.516	Macaca_fascicularis
MGP_SPRETEiJ_G0030085	Recql	100	87.425	ENSMMUG00000010857	RECQL	100	85.516	Macaca_mulatta
MGP_SPRETEiJ_G0030085	Recql	100	87.425	ENSMNEG00000031827	RECQL	100	85.516	Macaca_nemestrina
MGP_SPRETEiJ_G0030085	Recql	100	87.425	ENSMLEG00000039659	RECQL	99	87.980	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0030085	Recql	95	56.086	ENSMAMG00000023289	recql	94	56.650	Mastacembelus_armatus
MGP_SPRETEiJ_G0030085	Recql	98	56.426	ENSMZEG00005016027	recql	99	56.786	Maylandia_zebra
MGP_SPRETEiJ_G0030085	Recql	95	76.127	ENSMGAG00000013629	RECQL	96	72.939	Meleagris_gallopavo
MGP_SPRETEiJ_G0030085	Recql	100	88.623	ENSMAUG00000010642	Recql	99	90.129	Mesocricetus_auratus
MGP_SPRETEiJ_G0030085	Recql	100	82.036	ENSMICG00000002664	RECQL	99	82.562	Microcebus_murinus
MGP_SPRETEiJ_G0030085	Recql	100	88.272	ENSMOCG00000007093	Recql	100	88.272	Microtus_ochrogaster
MGP_SPRETEiJ_G0030085	Recql	98	55.128	ENSMMOG00000007279	recql	97	55.680	Mola_mola
MGP_SPRETEiJ_G0030085	Recql	98	80.676	ENSMODG00000017805	RECQL	99	78.802	Monodelphis_domestica
MGP_SPRETEiJ_G0030085	Recql	94	56.882	ENSMALG00000004415	recql	94	56.882	Monopterus_albus
MGP_SPRETEiJ_G0030085	Recql	100	98.574	MGP_CAROLIEiJ_G0029030	Recql	100	98.574	Mus_caroli
MGP_SPRETEiJ_G0030085	Recql	100	98.302	ENSMUSG00000030243	Recql	100	98.302	Mus_musculus
MGP_SPRETEiJ_G0030085	Recql	100	95.833	MGP_PahariEiJ_G0022791	Recql	100	95.833	Mus_pahari
MGP_SPRETEiJ_G0030085	Recql	100	82.126	ENSMPUG00000000202	RECQL	100	82.126	Mustela_putorius_furo
MGP_SPRETEiJ_G0030085	Recql	100	83.205	ENSMLUG00000005741	RECQL	100	83.205	Myotis_lucifugus
MGP_SPRETEiJ_G0030085	Recql	100	88.024	ENSNGAG00000010997	-	100	87.654	Nannospalax_galili
MGP_SPRETEiJ_G0030085	Recql	100	76.786	ENSNGAG00000020417	-	98	71.846	Nannospalax_galili
MGP_SPRETEiJ_G0030085	Recql	98	57.008	ENSNBRG00000020825	recql	99	57.367	Neolamprologus_brichardi
MGP_SPRETEiJ_G0030085	Recql	100	87.425	ENSNLEG00000004797	RECQL	100	85.824	Nomascus_leucogenys
MGP_SPRETEiJ_G0030085	Recql	100	85.629	ENSOPRG00000007493	RECQL	100	86.811	Ochotona_princeps
MGP_SPRETEiJ_G0030085	Recql	97	85.831	ENSODEG00000010240	RECQL	100	85.831	Octodon_degus
MGP_SPRETEiJ_G0030085	Recql	96	57.097	ENSONIG00000001694	recql	96	57.464	Oreochromis_niloticus
MGP_SPRETEiJ_G0030085	Recql	56	58.511	ENSOANG00000021930	-	100	46.921	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0030085	Recql	100	83.677	ENSOCUG00000008787	RECQL	100	83.205	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0030085	Recql	97	55.226	ENSORLG00000012853	recql	98	53.765	Oryzias_latipes
MGP_SPRETEiJ_G0030085	Recql	96	56.683	ENSORLG00020020245	recql	98	56.220	Oryzias_latipes_hni
MGP_SPRETEiJ_G0030085	Recql	96	56.683	ENSORLG00015018708	recql	98	56.220	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0030085	Recql	97	56.960	ENSOMEG00000019484	recql	97	56.960	Oryzias_melastigma
MGP_SPRETEiJ_G0030085	Recql	99	84.341	ENSOGAG00000004754	RECQL	99	84.341	Otolemur_garnettii
MGP_SPRETEiJ_G0030085	Recql	100	83.234	ENSOARG00000020343	RECQL	100	82.589	Ovis_aries
MGP_SPRETEiJ_G0030085	Recql	93	86.047	ENSPPAG00000030306	RECQL	99	82.308	Pan_paniscus
MGP_SPRETEiJ_G0030085	Recql	100	82.870	ENSPPRG00000010371	RECQL	99	82.870	Panthera_pardus
MGP_SPRETEiJ_G0030085	Recql	100	82.870	ENSPTIG00000008593	RECQL	100	82.870	Panthera_tigris_altaica
MGP_SPRETEiJ_G0030085	Recql	100	86.826	ENSPTRG00000004758	RECQL	99	84.923	Pan_troglodytes
MGP_SPRETEiJ_G0030085	Recql	100	87.425	ENSPANG00000003394	RECQL	100	85.670	Papio_anubis
MGP_SPRETEiJ_G0030085	Recql	98	57.595	ENSPKIG00000008072	recql	97	57.595	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0030085	Recql	95	78.773	ENSPSIG00000002979	RECQL	96	74.613	Pelodiscus_sinensis
MGP_SPRETEiJ_G0030085	Recql	99	54.101	ENSPMGG00000011010	recql	96	54.675	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0030085	Recql	100	91.988	ENSPEMG00000016418	Recql	100	91.988	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0030085	Recql	100	53.179	ENSPMAG00000005495	recql	100	57.166	Petromyzon_marinus
MGP_SPRETEiJ_G0030085	Recql	99	80.707	ENSPCIG00000022452	RECQL	99	78.714	Phascolarctos_cinereus
MGP_SPRETEiJ_G0030085	Recql	98	57.006	ENSPFOG00000000940	recql	96	57.188	Poecilia_formosa
MGP_SPRETEiJ_G0030085	Recql	98	56.847	ENSPLAG00000006194	recql	96	56.714	Poecilia_latipinna
MGP_SPRETEiJ_G0030085	Recql	99	56.309	ENSPMEG00000013399	recql	97	56.495	Poecilia_mexicana
MGP_SPRETEiJ_G0030085	Recql	98	56.529	ENSPREG00000012991	recql	98	56.714	Poecilia_reticulata
MGP_SPRETEiJ_G0030085	Recql	100	86.228	ENSPPYG00000004352	RECQL	100	85.054	Pongo_abelii
MGP_SPRETEiJ_G0030085	Recql	100	83.832	ENSPCOG00000027353	RECQL	100	83.832	Propithecus_coquereli
MGP_SPRETEiJ_G0030085	Recql	93	84.411	ENSPVAG00000002457	RECQL	93	84.411	Pteropus_vampyrus
MGP_SPRETEiJ_G0030085	Recql	98	56.426	ENSPNYG00000016013	recql	99	56.786	Pundamilia_nyererei
MGP_SPRETEiJ_G0030085	Recql	98	58.347	ENSPNAG00000029317	recql	97	57.740	Pygocentrus_nattereri
MGP_SPRETEiJ_G0030085	Recql	98	89.677	ENSRNOG00000012602	Recql	99	90.711	Rattus_norvegicus
MGP_SPRETEiJ_G0030085	Recql	100	87.425	ENSRBIG00000034966	RECQL	100	85.208	Rhinopithecus_bieti
MGP_SPRETEiJ_G0030085	Recql	100	87.425	ENSRROG00000010234	RECQL	100	85.208	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0030085	Recql	100	86.228	ENSSBOG00000005645	RECQL	100	85.978	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0030085	Recql	99	80.707	ENSSHAG00000015815	RECQL	99	78.560	Sarcophilus_harrisii
MGP_SPRETEiJ_G0030085	Recql	99	59.875	ENSSFOG00015002537	recql	97	59.875	Scleropages_formosus
MGP_SPRETEiJ_G0030085	Recql	98	54.961	ENSSMAG00000014910	recql	98	55.450	Scophthalmus_maximus
MGP_SPRETEiJ_G0030085	Recql	98	55.222	ENSSDUG00000019205	recql	97	55.450	Seriola_dumerili
MGP_SPRETEiJ_G0030085	Recql	98	55.538	ENSSLDG00000013921	recql	97	55.450	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0030085	Recql	90	62.852	ENSSPUG00000018613	RECQL	98	59.774	Sphenodon_punctatus
MGP_SPRETEiJ_G0030085	Recql	97	54.896	ENSSPAG00000008384	recql	99	54.631	Stegastes_partitus
MGP_SPRETEiJ_G0030085	Recql	100	81.972	ENSSSCG00000000580	RECQL	100	83.700	Sus_scrofa
MGP_SPRETEiJ_G0030085	Recql	99	70.788	ENSTGUG00000011730	RECQL	98	70.788	Taeniopygia_guttata
MGP_SPRETEiJ_G0030085	Recql	96	56.033	ENSTRUG00000000534	recql	99	57.319	Takifugu_rubripes
MGP_SPRETEiJ_G0030085	Recql	99	54.313	ENSTNIG00000007242	recql	99	54.313	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0030085	Recql	91	83.012	ENSTBEG00000004653	RECQL	91	83.012	Tupaia_belangeri
MGP_SPRETEiJ_G0030085	Recql	100	81.437	ENSTTRG00000003296	RECQL	90	81.437	Tursiops_truncatus
MGP_SPRETEiJ_G0030085	Recql	100	82.099	ENSUAMG00000003261	RECQL	100	82.099	Ursus_americanus
MGP_SPRETEiJ_G0030085	Recql	100	83.179	ENSUMAG00000001523	RECQL	100	83.179	Ursus_maritimus
MGP_SPRETEiJ_G0030085	Recql	87	87.179	ENSVPAG00000007546	RECQL	89	85.069	Vicugna_pacos
MGP_SPRETEiJ_G0030085	Recql	99	83.601	ENSVVUG00000001101	RECQL	100	82.562	Vulpes_vulpes
MGP_SPRETEiJ_G0030085	Recql	79	69.632	ENSXETG00000013524	recql	99	70.019	Xenopus_tropicalis
MGP_SPRETEiJ_G0030085	Recql	98	55.272	ENSXMAG00000029316	recql	98	55.450	Xiphophorus_maculatus