EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0030152 (Gene tree)
Gene ID: -
Gene Symbol: Tsen34
Alias: 0610027F08Rik|Leng5
Full Name: tRNA splicing endonuclease subunit 34
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 8109 bases
Position: chr7:634026-642134
Accession: 1913328
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0080364	tRNA_int_endo	PF01974.17	8e-21	1	1
MGP_SPRETEiJ_P0080362	tRNA_int_endo	PF01974.17	8.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0080361	-	337	-	MGP_SPRETEiJ_P0080361	85 (aa)	-	UPI000719A3ED
MGP_SPRETEiJ_T0080362	-	1787	-	MGP_SPRETEiJ_P0080362	316 (aa)	-	-
MGP_SPRETEiJ_T0080363	-	720	-	MGP_SPRETEiJ_P0080363	150 (aa)	-	-
MGP_SPRETEiJ_T0080364	-	1366	-	MGP_SPRETEiJ_P0080364	312 (aa)	-	-
MGP_SPRETEiJ_T0080365	-	1162	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0080366	-	709	-	MGP_SPRETEiJ_P0080366	158 (aa)	-	-
MGP_SPRETEiJ_T0080367	-	480	-	MGP_SPRETEiJ_P0080367	143 (aa)	-	UPI00015AA4F2
MGP_SPRETEiJ_T0080368	-	930	-	MGP_SPRETEiJ_P0080368	167 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0030152's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0030152's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0030152	Tsen34	100	88.462	ENSG00000170892	TSEN34	100	88.462	Homo_sapiens
MGP_SPRETEiJ_G0030152	Tsen34	99	38.264	ENSAPOG00000001248	tsen34	93	38.264	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0030152	Tsen34	94	35.932	ENSAPOG00000012557	-	86	35.932	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0030152	Tsen34	94	37.288	ENSAPOG00000008579	-	93	37.288	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0030152	Tsen34	92	87.413	ENSAMEG00000004585	TSEN34	100	87.413	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0030152	Tsen34	99	38.438	ENSACIG00000007110	tsen34	87	38.438	Amphilophus_citrinellus
MGP_SPRETEiJ_G0030152	Tsen34	99	39.355	ENSAOCG00000006905	tsen34	93	39.355	Amphiprion_ocellaris
MGP_SPRETEiJ_G0030152	Tsen34	99	39.677	ENSAPEG00000019171	tsen34	93	39.355	Amphiprion_percula
MGP_SPRETEiJ_G0030152	Tsen34	99	37.421	ENSATEG00000019800	tsen34	97	38.235	Anabas_testudineus
MGP_SPRETEiJ_G0030152	Tsen34	100	45.541	ENSACAG00000016189	TSEN34	100	45.597	Anolis_carolinensis
MGP_SPRETEiJ_G0030152	Tsen34	100	89.423	ENSANAG00000026113	TSEN34	100	89.423	Aotus_nancymaae
MGP_SPRETEiJ_G0030152	Tsen34	99	39.103	ENSAMXG00000017568	tsen34	86	39.103	Astyanax_mexicanus
MGP_SPRETEiJ_G0030152	Tsen34	100	88.179	ENSBTAG00000006486	TSEN34	100	88.179	Bos_taurus
MGP_SPRETEiJ_G0030152	Tsen34	100	85.577	ENSCJAG00000001128	TSEN34	99	87.625	Callithrix_jacchus
MGP_SPRETEiJ_G0030152	Tsen34	100	86.076	ENSCAFG00000002675	TSEN34	100	87.220	Canis_familiaris
MGP_SPRETEiJ_G0030152	Tsen34	100	87.821	ENSCAFG00020018350	TSEN34	100	87.821	Canis_lupus_dingo
MGP_SPRETEiJ_G0030152	Tsen34	100	85.256	ENSCHIG00000020705	TSEN34	100	85.256	Capra_hircus
MGP_SPRETEiJ_G0030152	Tsen34	98	85.621	ENSTSYG00000028200	TSEN34	98	85.621	Carlito_syrichta
MGP_SPRETEiJ_G0030152	Tsen34	66	76.667	ENSCAPG00000012811	-	99	76.667	Cavia_aperea
MGP_SPRETEiJ_G0030152	Tsen34	99	81.447	ENSCPOG00000012672	TSEN34	99	81.447	Cavia_porcellus
MGP_SPRETEiJ_G0030152	Tsen34	100	89.103	ENSCCAG00000036023	TSEN34	100	89.103	Cebus_capucinus
MGP_SPRETEiJ_G0030152	Tsen34	96	86.288	ENSCATG00000033390	TSEN34	94	86.288	Cercocebus_atys
MGP_SPRETEiJ_G0030152	Tsen34	100	85.256	ENSCLAG00000000618	TSEN34	100	85.256	Chinchilla_lanigera
MGP_SPRETEiJ_G0030152	Tsen34	100	87.821	ENSCSAG00000001891	TSEN34	100	87.821	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0030152	Tsen34	100	87.821	ENSCANG00000040984	TSEN34	100	87.821	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0030152	Tsen34	100	93.671	ENSCGRG00001006296	Tsen34	100	93.671	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0030152	Tsen34	73	85.294	ENSCGRG00000008494	Tsen34	100	88.235	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0030152	Tsen34	96	38.961	ENSCSEG00000006278	tsen34	86	38.961	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0030152	Tsen34	99	37.500	ENSDARG00000061370	tsen34	89	37.812	Danio_rerio
MGP_SPRETEiJ_G0030152	Tsen34	100	86.218	ENSDNOG00000039332	TSEN34	100	85.897	Dasypus_novemcinctus
MGP_SPRETEiJ_G0030152	Tsen34	100	85.897	ENSDORG00000029071	Tsen34	100	85.897	Dipodomys_ordii
MGP_SPRETEiJ_G0030152	Tsen34	100	87.500	ENSEASG00005021580	TSEN34	100	87.500	Equus_asinus_asinus
MGP_SPRETEiJ_G0030152	Tsen34	100	87.821	ENSECAG00000019651	TSEN34	86	87.821	Equus_caballus
MGP_SPRETEiJ_G0030152	Tsen34	60	82.447	ENSEEUG00000005692	TSEN34	66	82.447	Erinaceus_europaeus
MGP_SPRETEiJ_G0030152	Tsen34	99	37.421	ENSELUG00000006262	tsen34	92	37.421	Esox_lucius
MGP_SPRETEiJ_G0030152	Tsen34	100	87.179	ENSFCAG00000014045	TSEN34	100	87.179	Felis_catus
MGP_SPRETEiJ_G0030152	Tsen34	84	80.989	ENSFDAG00000017995	TSEN34	98	82.490	Fukomys_damarensis
MGP_SPRETEiJ_G0030152	Tsen34	99	39.355	ENSGAFG00000016880	tsen34	93	39.355	Gambusia_affinis
MGP_SPRETEiJ_G0030152	Tsen34	99	38.438	ENSGACG00000004800	tsen34	99	38.438	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0030152	Tsen34	100	46.541	ENSGAGG00000008982	TSEN34	73	46.541	Gopherus_agassizii
MGP_SPRETEiJ_G0030152	Tsen34	100	88.462	ENSGGOG00000008197	TSEN34	100	88.462	Gorilla_gorilla
MGP_SPRETEiJ_G0030152	Tsen34	100	85.443	ENSHGLG00000017619	TSEN34	100	85.443	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0030152	Tsen34	100	67.937	ENSHGLG00100008719	TSEN34	100	68.868	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0030152	Tsen34	96	38.614	ENSHCOG00000001368	tsen34	92	38.614	Hippocampus_comes
MGP_SPRETEiJ_G0030152	Tsen34	96	37.621	ENSIPUG00000008359	tsen34	85	37.621	Ictalurus_punctatus
MGP_SPRETEiJ_G0030152	Tsen34	100	86.538	ENSSTOG00000023816	TSEN34	100	86.538	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0030152	Tsen34	100	90.823	ENSJJAG00000016301	Tsen34	100	90.823	Jaculus_jaculus
MGP_SPRETEiJ_G0030152	Tsen34	99	38.924	ENSKMAG00000007181	tsen34	82	39.935	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0030152	Tsen34	99	39.937	ENSLBEG00000015001	tsen34	94	39.937	Labrus_bergylta
MGP_SPRETEiJ_G0030152	Tsen34	74	44.167	ENSLACG00000013346	-	99	44.167	Latimeria_chalumnae
MGP_SPRETEiJ_G0030152	Tsen34	99	39.809	ENSLOCG00000001887	tsen34	97	39.809	Lepisosteus_oculatus
MGP_SPRETEiJ_G0030152	Tsen34	100	86.478	ENSLAFG00000015215	TSEN34	100	86.751	Loxodonta_africana
MGP_SPRETEiJ_G0030152	Tsen34	100	87.821	ENSMFAG00000044825	TSEN34	100	87.821	Macaca_fascicularis
MGP_SPRETEiJ_G0030152	Tsen34	100	87.821	ENSMMUG00000016571	TSEN34	100	87.821	Macaca_mulatta
MGP_SPRETEiJ_G0030152	Tsen34	100	87.821	ENSMNEG00000045457	TSEN34	100	87.821	Macaca_nemestrina
MGP_SPRETEiJ_G0030152	Tsen34	96	72.241	ENSMLEG00000034295	TSEN34	93	72.241	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0030152	Tsen34	99	38.535	ENSMAMG00000018407	tsen34	95	38.141	Mastacembelus_armatus
MGP_SPRETEiJ_G0030152	Tsen34	81	94.094	ENSMAUG00000019716	Tsen34	81	94.094	Mesocricetus_auratus
MGP_SPRETEiJ_G0030152	Tsen34	100	90.705	ENSMICG00000002409	TSEN34	100	90.705	Microcebus_murinus
MGP_SPRETEiJ_G0030152	Tsen34	100	96.226	ENSMOCG00000022190	Tsen34	100	96.226	Microtus_ochrogaster
MGP_SPRETEiJ_G0030152	Tsen34	99	36.656	ENSMMOG00000009551	tsen34	99	35.370	Mola_mola
MGP_SPRETEiJ_G0030152	Tsen34	99	58.521	ENSMODG00000003984	-	76	61.093	Monodelphis_domestica
MGP_SPRETEiJ_G0030152	Tsen34	97	38.978	ENSMALG00000018918	tsen34	94	37.421	Monopterus_albus
MGP_SPRETEiJ_G0030152	Tsen34	100	99.679	MGP_CAROLIEiJ_G0029099	Tsen34	100	99.679	Mus_caroli
MGP_SPRETEiJ_G0030152	Tsen34	100	99.684	ENSMUSG00000035585	Tsen34	100	99.684	Mus_musculus
MGP_SPRETEiJ_G0030152	Tsen34	100	99.361	MGP_PahariEiJ_G0020968	Tsen34	100	99.361	Mus_pahari
MGP_SPRETEiJ_G0030152	Tsen34	100	88.462	ENSMPUG00000010373	TSEN34	100	88.462	Mustela_putorius_furo
MGP_SPRETEiJ_G0030152	Tsen34	100	86.306	ENSMLUG00000016894	TSEN34	100	86.306	Myotis_lucifugus
MGP_SPRETEiJ_G0030152	Tsen34	86	87.640	ENSNGAG00000016187	Tsen34	97	87.640	Nannospalax_galili
MGP_SPRETEiJ_G0030152	Tsen34	100	87.821	ENSNLEG00000006309	TSEN34	100	87.821	Nomascus_leucogenys
MGP_SPRETEiJ_G0030152	Tsen34	99	60.772	ENSMEUG00000002978	TSEN34	99	60.772	Notamacropus_eugenii
MGP_SPRETEiJ_G0030152	Tsen34	100	79.876	ENSODEG00000000096	TSEN34	100	79.876	Octodon_degus
MGP_SPRETEiJ_G0030152	Tsen34	77	52.066	ENSOANG00000014747	-	99	52.521	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0030152	Tsen34	99	38.291	ENSORLG00015012740	tsen34	94	38.782	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0030152	Tsen34	100	88.141	ENSOGAG00000006966	TSEN34	100	88.141	Otolemur_garnettii
MGP_SPRETEiJ_G0030152	Tsen34	91	81.338	ENSOARG00000002763	TSEN34	95	81.338	Ovis_aries
MGP_SPRETEiJ_G0030152	Tsen34	100	88.141	ENSPPAG00000036935	TSEN34	100	88.141	Pan_paniscus
MGP_SPRETEiJ_G0030152	Tsen34	100	87.500	ENSPPRG00000011779	TSEN34	100	87.500	Panthera_pardus
MGP_SPRETEiJ_G0030152	Tsen34	100	88.462	ENSPTRG00000011448	TSEN34	100	88.462	Pan_troglodytes
MGP_SPRETEiJ_G0030152	Tsen34	100	88.462	ENSPTRG00000044768	-	100	88.462	Pan_troglodytes
MGP_SPRETEiJ_G0030152	Tsen34	100	88.141	ENSPANG00000012101	TSEN34	100	88.141	Papio_anubis
MGP_SPRETEiJ_G0030152	Tsen34	96	39.355	ENSPKIG00000014674	tsen34	90	38.710	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0030152	Tsen34	100	97.115	ENSPEMG00000014535	Tsen34	100	97.115	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0030152	Tsen34	99	38.585	ENSPLAG00000017309	tsen34	93	38.854	Poecilia_latipinna
MGP_SPRETEiJ_G0030152	Tsen34	99	38.658	ENSPREG00000021784	tsen34	93	38.658	Poecilia_reticulata
MGP_SPRETEiJ_G0030152	Tsen34	100	89.103	ENSPPYG00000010376	TSEN34	96	89.103	Pongo_abelii
MGP_SPRETEiJ_G0030152	Tsen34	99	87.460	ENSPCAG00000012359	TSEN34	100	87.781	Procavia_capensis
MGP_SPRETEiJ_G0030152	Tsen34	100	90.415	ENSPCOG00000013843	TSEN34	100	90.415	Propithecus_coquereli
MGP_SPRETEiJ_G0030152	Tsen34	100	83.013	ENSPVAG00000015570	TSEN34	100	83.013	Pteropus_vampyrus
MGP_SPRETEiJ_G0030152	Tsen34	99	36.677	ENSPNAG00000028698	tsen34	86	36.677	Pygocentrus_nattereri
MGP_SPRETEiJ_G0030152	Tsen34	100	99.359	ENSRNOG00000055179	Tsen34	100	99.359	Rattus_norvegicus
MGP_SPRETEiJ_G0030152	Tsen34	100	99.359	ENSRNOG00000059572	Tsen34l1	100	99.359	Rattus_norvegicus
MGP_SPRETEiJ_G0030152	Tsen34	100	88.462	ENSRBIG00000034430	TSEN34	100	88.462	Rhinopithecus_bieti
MGP_SPRETEiJ_G0030152	Tsen34	100	88.462	ENSRROG00000024217	TSEN34	100	88.462	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0030152	Tsen34	96	88.963	ENSSBOG00000016017	TSEN34	97	88.926	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0030152	Tsen34	70	57.798	ENSSHAG00000009295	-	99	59.174	Sarcophilus_harrisii
MGP_SPRETEiJ_G0030152	Tsen34	96	40.594	ENSSMAG00000005214	tsen34	93	40.594	Scophthalmus_maximus
MGP_SPRETEiJ_G0030152	Tsen34	99	39.365	ENSSDUG00000005391	tsen34	91	39.365	Seriola_dumerili
MGP_SPRETEiJ_G0030152	Tsen34	99	39.683	ENSSLDG00000006144	tsen34	88	39.365	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0030152	Tsen34	94	76.094	ENSSARG00000005857	TSEN34	79	76.094	Sorex_araneus
MGP_SPRETEiJ_G0030152	Tsen34	100	41.562	ENSSPUG00000008447	TSEN34	100	41.562	Sphenodon_punctatus
MGP_SPRETEiJ_G0030152	Tsen34	99	38.065	ENSSPAG00000010512	tsen34	92	37.742	Stegastes_partitus
MGP_SPRETEiJ_G0030152	Tsen34	100	87.500	ENSSSCG00000003268	TSEN34	100	87.500	Sus_scrofa
MGP_SPRETEiJ_G0030152	Tsen34	100	88.782	ENSTTRG00000006571	TSEN34	100	88.782	Tursiops_truncatus
MGP_SPRETEiJ_G0030152	Tsen34	100	87.500	ENSUAMG00000008701	TSEN34	100	88.782	Ursus_americanus
MGP_SPRETEiJ_G0030152	Tsen34	100	87.821	ENSVVUG00000008211	TSEN34	100	87.821	Vulpes_vulpes
MGP_SPRETEiJ_G0030152	Tsen34	100	42.320	ENSXETG00000004597	tsen34	100	42.633	Xenopus_tropicalis
MGP_SPRETEiJ_G0030152	Tsen34	99	38.710	ENSXMAG00000024266	tsen34	93	38.710	Xiphophorus_maculatus