EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0030193 (Gene tree)
Gene ID: -
Gene Symbol: Zfp579
Alias: 1110003A17Rik
Full Name: zinc finger protein 579
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 12704 bases
Position: chr7:1962221-1974924
Accession: 1915740
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0080564	zf-C2H2	PF00096.26	5.9e-35	1	7
MGP_SPRETEiJ_P0080564	zf-C2H2	PF00096.26	5.9e-35	2	7
MGP_SPRETEiJ_P0080564	zf-C2H2	PF00096.26	5.9e-35	3	7
MGP_SPRETEiJ_P0080564	zf-C2H2	PF00096.26	5.9e-35	4	7
MGP_SPRETEiJ_P0080564	zf-C2H2	PF00096.26	5.9e-35	5	7
MGP_SPRETEiJ_P0080564	zf-C2H2	PF00096.26	5.9e-35	6	7
MGP_SPRETEiJ_P0080564	zf-C2H2	PF00096.26	5.9e-35	7	7
MGP_SPRETEiJ_P0080565	zf-C2H2	PF00096.26	5.9e-35	1	7
MGP_SPRETEiJ_P0080565	zf-C2H2	PF00096.26	5.9e-35	2	7
MGP_SPRETEiJ_P0080565	zf-C2H2	PF00096.26	5.9e-35	3	7
MGP_SPRETEiJ_P0080565	zf-C2H2	PF00096.26	5.9e-35	4	7
MGP_SPRETEiJ_P0080565	zf-C2H2	PF00096.26	5.9e-35	5	7
MGP_SPRETEiJ_P0080565	zf-C2H2	PF00096.26	5.9e-35	6	7
MGP_SPRETEiJ_P0080565	zf-C2H2	PF00096.26	5.9e-35	7	7
MGP_SPRETEiJ_P0080566	zf-C2H2	PF00096.26	7.1e-14	1	3
MGP_SPRETEiJ_P0080566	zf-C2H2	PF00096.26	7.1e-14	2	3
MGP_SPRETEiJ_P0080566	zf-C2H2	PF00096.26	7.1e-14	3	3
MGP_SPRETEiJ_P0080566	zf-met	PF12874.7	5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0080566	-	793	-	MGP_SPRETEiJ_P0080566	236 (aa)	-	-
MGP_SPRETEiJ_T0080567	-	366	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0080564	-	2485	-	MGP_SPRETEiJ_P0080564	562 (aa)	-	-
MGP_SPRETEiJ_T0080565	-	2152	-	MGP_SPRETEiJ_P0080565	562 (aa)	-	-
MGP_SPRETEiJ_T0080562	-	1529	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0080563	-	851	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0030193's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0030193's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0030193	Zfp579	81	43.860	MGP_SPRETEiJ_G0030197	-	66	42.593
MGP_SPRETEiJ_G0030193	Zfp579	88	38.636	MGP_SPRETEiJ_G0031639	Zfp646	61	37.778

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0030193	Zfp579	100	98.043	MGP_CAROLIEiJ_G0029140	Zfp579	100	98.043	Mus_caroli
MGP_SPRETEiJ_G0030193	Zfp579	100	99.466	ENSMUSG00000051550	Zfp579	100	99.466	Mus_musculus
MGP_SPRETEiJ_G0030193	Zfp579	100	97.153	MGP_PahariEiJ_G0021008	Zfp579	100	97.153	Mus_pahari