EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0030196 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: 6430526N21Rik
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 13050 bases
Position: chr7:2002926-2015975
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0080572	zf-C2H2	PF00096.26	1.8e-72	1	11
MGP_SPRETEiJ_P0080572	zf-C2H2	PF00096.26	1.8e-72	2	11
MGP_SPRETEiJ_P0080572	zf-C2H2	PF00096.26	1.8e-72	3	11
MGP_SPRETEiJ_P0080572	zf-C2H2	PF00096.26	1.8e-72	4	11
MGP_SPRETEiJ_P0080572	zf-C2H2	PF00096.26	1.8e-72	5	11
MGP_SPRETEiJ_P0080572	zf-C2H2	PF00096.26	1.8e-72	6	11
MGP_SPRETEiJ_P0080572	zf-C2H2	PF00096.26	1.8e-72	7	11
MGP_SPRETEiJ_P0080572	zf-C2H2	PF00096.26	1.8e-72	8	11
MGP_SPRETEiJ_P0080572	zf-C2H2	PF00096.26	1.8e-72	9	11
MGP_SPRETEiJ_P0080572	zf-C2H2	PF00096.26	1.8e-72	10	11
MGP_SPRETEiJ_P0080572	zf-C2H2	PF00096.26	1.8e-72	11	11
MGP_SPRETEiJ_P0080572	zf-met	PF12874.7	4.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0080572	-	3958	-	MGP_SPRETEiJ_P0080572	1058 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0030196's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0030196's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0030196	-	79	34.667	MGP_SPRETEiJ_G0030417	Zfp114	68	38.340
MGP_SPRETEiJ_G0030196	-	82	39.749	MGP_SPRETEiJ_G0030416	Zfp235	67	40.316
MGP_SPRETEiJ_G0030196	-	79	31.092	MGP_SPRETEiJ_G0019560	Zfp748	92	36.290
MGP_SPRETEiJ_G0030196	-	84	32.090	MGP_SPRETEiJ_G0029346	Repin1	92	31.970
MGP_SPRETEiJ_G0030196	-	79	41.071	MGP_SPRETEiJ_G0015474	Zbtb41	55	34.167
MGP_SPRETEiJ_G0030196	-	79	38.431	MGP_SPRETEiJ_G0017233	Zfp672	97	40.260
MGP_SPRETEiJ_G0030196	-	79	46.154	MGP_SPRETEiJ_G0031612	Zfp768	50	46.154
MGP_SPRETEiJ_G0030196	-	80	34.831	MGP_SPRETEiJ_G0031613	-	88	34.831
MGP_SPRETEiJ_G0030196	-	80	34.701	MGP_SPRETEiJ_G0032539	Zfp319	89	38.889
MGP_SPRETEiJ_G0030196	-	91	44.944	MGP_SPRETEiJ_G0030188	Zfp628	67	44.944
MGP_SPRETEiJ_G0030196	-	79	37.895	MGP_SPRETEiJ_G0017856	Zfp652	65	36.154
MGP_SPRETEiJ_G0030196	-	88	31.288	MGP_SPRETEiJ_G0030526	-	86	37.118
MGP_SPRETEiJ_G0030196	-	78	32.468	MGP_SPRETEiJ_G0025644	Zfp64	91	32.323
MGP_SPRETEiJ_G0030196	-	79	36.574	MGP_SPRETEiJ_G0017272	Zfp867	84	36.782
MGP_SPRETEiJ_G0030196	-	77	41.026	MGP_SPRETEiJ_G0029809	Zfp637	88	41.772
MGP_SPRETEiJ_G0030196	-	99	100.000	MGP_SPRETEiJ_G0030197	-	99	100.000
MGP_SPRETEiJ_G0030196	-	79	47.170	MGP_SPRETEiJ_G0028173	Zbtb49	67	46.774
MGP_SPRETEiJ_G0030196	-	80	37.634	MGP_SPRETEiJ_G0030586	Zfp420	99	37.634
MGP_SPRETEiJ_G0030196	-	82	34.156	MGP_SPRETEiJ_G0030713	Zfp715	65	35.458
MGP_SPRETEiJ_G0030196	-	80	39.286	MGP_SPRETEiJ_G0032697	Zfp1	67	39.791
MGP_SPRETEiJ_G0030196	-	78	44.444	MGP_SPRETEiJ_G0023360	Zfp236	72	44.444
MGP_SPRETEiJ_G0030196	-	79	42.857	MGP_SPRETEiJ_G0019544	Zfp759	89	41.026
MGP_SPRETEiJ_G0030196	-	78	35.743	MGP_SPRETEiJ_G0027723	Zbtb17	56	40.741
MGP_SPRETEiJ_G0030196	-	79	40.969	MGP_SPRETEiJ_G0030421	-	92	40.969
MGP_SPRETEiJ_G0030196	-	71	39.535	MGP_SPRETEiJ_G0025181	Zfp661	64	41.463
MGP_SPRETEiJ_G0030196	-	82	31.579	MGP_SPRETEiJ_G0022057	Zscan10	86	31.579
MGP_SPRETEiJ_G0030196	-	80	36.111	MGP_SPRETEiJ_G0030453	Zfp574	92	41.463
MGP_SPRETEiJ_G0030196	-	80	34.831	MGP_SPRETEiJ_G0031614	-	88	34.831
MGP_SPRETEiJ_G0030196	-	86	38.340	MGP_SPRETEiJ_G0030709	-	95	46.296
MGP_SPRETEiJ_G0030196	-	72	37.000	MGP_SPRETEiJ_G0019543	-	64	41.026
MGP_SPRETEiJ_G0030196	-	80	37.984	MGP_SPRETEiJ_G0020852	Zfp251	65	38.645
MGP_SPRETEiJ_G0030196	-	78	34.000	MGP_SPRETEiJ_G0033309	Zbtb16	50	33.503
MGP_SPRETEiJ_G0030196	-	80	32.645	MGP_SPRETEiJ_G0030524	Zfp59	80	36.255
MGP_SPRETEiJ_G0030196	-	78	37.891	MGP_SPRETEiJ_G0030423	Zfp94	72	46.602
MGP_SPRETEiJ_G0030196	-	81	32.731	MGP_SPRETEiJ_G0030420	Zfp108	66	40.000
MGP_SPRETEiJ_G0030196	-	78	32.895	MGP_SPRETEiJ_G0029467	Prdm5	81	32.735

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0030196	-	99	87.336	ENSG00000261221	ZNF865	99	88.555	Homo_sapiens
MGP_SPRETEiJ_G0030196	-	80	46.552	ENSAOCG00000022926	-	72	46.552	Amphiprion_ocellaris
MGP_SPRETEiJ_G0030196	-	78	40.314	ENSACLG00000016648	-	87	41.758	Astatotilapia_calliptera
MGP_SPRETEiJ_G0030196	-	96	85.895	ENSCAFG00000002564	ZNF865	99	87.067	Canis_familiaris
MGP_SPRETEiJ_G0030196	-	96	85.895	ENSCAFG00020015473	ZNF865	99	87.067	Canis_lupus_dingo
MGP_SPRETEiJ_G0030196	-	98	82.679	ENSCHIG00000012252	ZNF865	100	82.663	Capra_hircus
MGP_SPRETEiJ_G0030196	-	89	97.727	ENSCAPG00000009522	ZNF865	86	97.561	Cavia_aperea
MGP_SPRETEiJ_G0030196	-	98	83.716	ENSCPOG00000040579	ZNF865	98	85.100	Cavia_porcellus
MGP_SPRETEiJ_G0030196	-	98	60.172	ENSCPBG00000004542	ZNF865	98	60.038	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0030196	-	100	86.031	ENSCGRG00001013598	Zfp865	100	87.419	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0030196	-	65	85.673	ENSDNOG00000045263	ZNF865	99	82.941	Dasypus_novemcinctus
MGP_SPRETEiJ_G0030196	-	98	74.693	ENSDORG00000023200	Zfp865	98	88.372	Dipodomys_ordii
MGP_SPRETEiJ_G0030196	-	89	99.203	ENSETEG00000015836	ZNF865	75	93.610	Echinops_telfairi
MGP_SPRETEiJ_G0030196	-	65	91.474	ENSEASG00005020728	ZNF865	94	88.596	Equus_asinus_asinus
MGP_SPRETEiJ_G0030196	-	66	91.392	ENSECAG00000035836	ZNF865	97	88.784	Equus_caballus
MGP_SPRETEiJ_G0030196	-	67	88.359	ENSFCAG00000028412	ZNF865	86	85.171	Felis_catus
MGP_SPRETEiJ_G0030196	-	98	59.732	ENSGAGG00000003095	ZNF865	99	59.360	Gopherus_agassizii
MGP_SPRETEiJ_G0030196	-	88	78.143	ENSHGLG00100008506	ZNF865	98	100.000	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0030196	-	98	88.782	ENSSTOG00000025586	ZNF865	100	90.085	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0030196	-	98	88.878	ENSJJAG00000011934	Zfp865	100	89.934	Jaculus_jaculus
MGP_SPRETEiJ_G0030196	-	90	75.221	ENSLAFG00000030700	ZNF865	99	86.420	Loxodonta_africana
MGP_SPRETEiJ_G0030196	-	99	86.667	ENSMFAG00000044401	ZNF865	99	87.981	Macaca_fascicularis
MGP_SPRETEiJ_G0030196	-	99	84.883	ENSMMUG00000043621	ZNF865	99	86.479	Macaca_mulatta
MGP_SPRETEiJ_G0030196	-	87	86.222	ENSMNEG00000038220	ZNF865	99	85.405	Macaca_nemestrina
MGP_SPRETEiJ_G0030196	-	79	39.098	ENSMALG00000004996	-	88	39.098	Monopterus_albus
MGP_SPRETEiJ_G0030196	-	99	99.338	MGP_CAROLIEiJ_G0029144	-	99	99.338	Mus_caroli
MGP_SPRETEiJ_G0030196	-	100	99.433	MGP_CAROLIEiJ_G0029143	-	100	99.433	Mus_caroli
MGP_SPRETEiJ_G0030196	-	100	99.905	ENSMUSG00000074405	Zfp865	100	99.905	Mus_musculus
MGP_SPRETEiJ_G0030196	-	99	99.338	MGP_PahariEiJ_G0021012	-	99	99.338	Mus_pahari
MGP_SPRETEiJ_G0030196	-	100	99.433	MGP_PahariEiJ_G0021011	-	100	99.433	Mus_pahari
MGP_SPRETEiJ_G0030196	-	100	85.943	ENSNGAG00000016004	Zfp865	100	85.849	Nannospalax_galili
MGP_SPRETEiJ_G0030196	-	79	46.552	ENSONIG00000007045	-	99	41.026	Oreochromis_niloticus
MGP_SPRETEiJ_G0030196	-	98	87.177	ENSOGAG00000029406	ZNF865	99	87.582	Otolemur_garnettii
MGP_SPRETEiJ_G0030196	-	96	79.648	ENSPPRG00000013523	ZNF865	99	81.707	Panthera_pardus
MGP_SPRETEiJ_G0030196	-	100	94.523	ENSPEMG00000007237	Zfp865	100	94.712	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0030196	-	97	75.549	ENSPCIG00000018022	ZNF865	96	76.835	Phascolarctos_cinereus
MGP_SPRETEiJ_G0030196	-	99	87.606	ENSPPYG00000010425	ZNF865	99	88.732	Pongo_abelii
MGP_SPRETEiJ_G0030196	-	100	98.772	ENSRNOG00000028628	LOC100911196	100	98.772	Rattus_norvegicus
MGP_SPRETEiJ_G0030196	-	99	91.029	ENSSARG00000013756	ZNF865	84	88.861	Sorex_araneus
MGP_SPRETEiJ_G0030196	-	80	46.552	ENSSPAG00000001452	-	71	46.552	Stegastes_partitus
MGP_SPRETEiJ_G0030196	-	99	78.888	ENSSSCG00000029156	ZNF865	100	83.695	Sus_scrofa
MGP_SPRETEiJ_G0030196	-	71	40.000	ENSTRUG00000024008	-	53	40.000	Takifugu_rubripes
MGP_SPRETEiJ_G0030196	-	97	81.685	ENSVVUG00000006986	ZNF865	99	92.029	Vulpes_vulpes