EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0030197 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 4171 bases
Position: chr7:2011353-2015523
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0080573	zf-C2H2	PF00096.26	2.7e-46	1	8
MGP_SPRETEiJ_P0080573	zf-C2H2	PF00096.26	2.7e-46	2	8
MGP_SPRETEiJ_P0080573	zf-C2H2	PF00096.26	2.7e-46	3	8
MGP_SPRETEiJ_P0080573	zf-C2H2	PF00096.26	2.7e-46	4	8
MGP_SPRETEiJ_P0080573	zf-C2H2	PF00096.26	2.7e-46	5	8
MGP_SPRETEiJ_P0080573	zf-C2H2	PF00096.26	2.7e-46	6	8
MGP_SPRETEiJ_P0080573	zf-C2H2	PF00096.26	2.7e-46	7	8
MGP_SPRETEiJ_P0080573	zf-C2H2	PF00096.26	2.7e-46	8	8
MGP_SPRETEiJ_P0080573	zf-met	PF12874.7	2.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0080573	-	2271	-	MGP_SPRETEiJ_P0080573	756 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0030197's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0030197's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0030197	-	66	31.343	MGP_SPRETEiJ_G0030586	Zfp420	95	30.691
MGP_SPRETEiJ_G0030197	-	66	31.017	MGP_SPRETEiJ_G0030421	-	92	35.465
MGP_SPRETEiJ_G0030197	-	51	46.296	MGP_SPRETEiJ_G0030199	Zfp784	71	46.296
MGP_SPRETEiJ_G0030197	-	99	100.000	MGP_SPRETEiJ_G0030196	-	99	100.000
MGP_SPRETEiJ_G0030197	-	66	42.593	MGP_SPRETEiJ_G0030193	Zfp579	81	43.860
MGP_SPRETEiJ_G0030197	-	73	30.796	MGP_SPRETEiJ_G0022057	Zscan10	74	41.818
MGP_SPRETEiJ_G0030197	-	66	44.444	MGP_SPRETEiJ_G0023360	Zfp236	71	44.444
MGP_SPRETEiJ_G0030197	-	66	31.675	MGP_SPRETEiJ_G0020852	Zfp251	63	37.278
MGP_SPRETEiJ_G0030197	-	67	31.667	MGP_SPRETEiJ_G0030525	-	83	40.698

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0030197	-	99	84.868	ENSG00000261221	ZNF865	98	85.995	Homo_sapiens
MGP_SPRETEiJ_G0030197	-	70	40.476	ENSAOCG00000022926	-	61	46.552	Amphiprion_ocellaris
MGP_SPRETEiJ_G0030197	-	65	40.314	ENSACLG00000016648	-	65	41.758	Astatotilapia_calliptera
MGP_SPRETEiJ_G0030197	-	96	81.682	ENSCAFG00000002564	ZNF865	98	83.660	Canis_familiaris
MGP_SPRETEiJ_G0030197	-	96	81.682	ENSCAFG00020015473	ZNF865	98	83.660	Canis_lupus_dingo
MGP_SPRETEiJ_G0030197	-	99	77.748	ENSCHIG00000012252	ZNF865	100	77.866	Capra_hircus
MGP_SPRETEiJ_G0030197	-	85	97.727	ENSCAPG00000009522	ZNF865	86	97.561	Cavia_aperea
MGP_SPRETEiJ_G0030197	-	97	77.507	ENSCPOG00000040579	ZNF865	98	80.295	Cavia_porcellus
MGP_SPRETEiJ_G0030197	-	95	57.123	ENSCPBG00000004542	ZNF865	92	57.123	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0030197	-	99	81.144	ENSCGRG00001013598	Zfp865	98	84.605	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0030197	-	95	87.500	ENSDNOG00000045263	ZNF865	98	78.496	Dasypus_novemcinctus
MGP_SPRETEiJ_G0030197	-	97	60.000	ENSDORG00000023200	Zfp865	96	82.160	Dipodomys_ordii
MGP_SPRETEiJ_G0030197	-	80	76.812	ENSETEG00000015836	ZNF865	72	78.689	Echinops_telfairi
MGP_SPRETEiJ_G0030197	-	95	93.040	ENSEASG00005020728	ZNF865	92	85.639	Equus_asinus_asinus
MGP_SPRETEiJ_G0030197	-	99	82.119	ENSECAG00000035836	ZNF865	96	85.903	Equus_caballus
MGP_SPRETEiJ_G0030197	-	96	77.463	ENSFCAG00000028412	ZNF865	84	80.533	Felis_catus
MGP_SPRETEiJ_G0030197	-	97	55.061	ENSGAGG00000003095	ZNF865	96	54.545	Gopherus_agassizii
MGP_SPRETEiJ_G0030197	-	84	69.585	ENSHGLG00100008506	ZNF865	97	100.000	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0030197	-	99	88.181	ENSSTOG00000025586	ZNF865	100	87.847	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0030197	-	97	86.413	ENSJJAG00000011934	Zfp865	98	87.500	Jaculus_jaculus
MGP_SPRETEiJ_G0030197	-	88	62.821	ENSLAFG00000030700	ZNF865	99	86.420	Loxodonta_africana
MGP_SPRETEiJ_G0030197	-	99	84.848	ENSMFAG00000044401	ZNF865	98	85.059	Macaca_fascicularis
MGP_SPRETEiJ_G0030197	-	99	85.903	ENSMMUG00000043621	ZNF865	98	86.107	Macaca_mulatta
MGP_SPRETEiJ_G0030197	-	82	84.270	ENSMNEG00000038220	ZNF865	98	81.579	Macaca_nemestrina
MGP_SPRETEiJ_G0030197	-	67	39.098	ENSMALG00000004996	-	86	39.098	Monopterus_albus
MGP_SPRETEiJ_G0030197	-	99	99.338	MGP_CAROLIEiJ_G0029143	-	99	99.338	Mus_caroli
MGP_SPRETEiJ_G0030197	-	100	99.339	MGP_CAROLIEiJ_G0029144	-	100	99.339	Mus_caroli
MGP_SPRETEiJ_G0030197	-	100	99.868	ENSMUSG00000074405	Zfp865	100	99.868	Mus_musculus
MGP_SPRETEiJ_G0030197	-	99	99.338	MGP_PahariEiJ_G0021011	-	99	99.338	Mus_pahari
MGP_SPRETEiJ_G0030197	-	100	99.339	MGP_PahariEiJ_G0021012	-	100	99.339	Mus_pahari
MGP_SPRETEiJ_G0030197	-	99	81.408	ENSNGAG00000016004	Zfp865	98	81.902	Nannospalax_galili
MGP_SPRETEiJ_G0030197	-	68	46.552	ENSONIG00000007045	-	99	43.094	Oreochromis_niloticus
MGP_SPRETEiJ_G0030197	-	99	84.676	ENSOGAG00000029406	ZNF865	98	84.231	Otolemur_garnettii
MGP_SPRETEiJ_G0030197	-	96	73.161	ENSPPRG00000013523	ZNF865	98	76.178	Panthera_pardus
MGP_SPRETEiJ_G0030197	-	99	93.750	ENSPEMG00000007237	Zfp865	98	93.915	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0030197	-	96	70.549	ENSPCIG00000018022	ZNF865	96	72.848	Phascolarctos_cinereus
MGP_SPRETEiJ_G0030197	-	99	85.244	ENSPPYG00000010425	ZNF865	98	86.107	Pongo_abelii
MGP_SPRETEiJ_G0030197	-	99	98.413	ENSRNOG00000028628	LOC100911196	98	98.413	Rattus_norvegicus
MGP_SPRETEiJ_G0030197	-	99	83.333	ENSSARG00000013756	ZNF865	84	80.785	Sorex_araneus
MGP_SPRETEiJ_G0030197	-	72	46.552	ENSSPAG00000001452	-	71	46.552	Stegastes_partitus
MGP_SPRETEiJ_G0030197	-	99	73.510	ENSSSCG00000029156	ZNF865	100	79.578	Sus_scrofa
MGP_SPRETEiJ_G0030197	-	67	36.620	ENSTRUG00000024008	-	53	40.000	Takifugu_rubripes
MGP_SPRETEiJ_G0030197	-	97	75.984	ENSVVUG00000006986	ZNF865	99	92.029	Vulpes_vulpes