EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0030298 (Gene tree)
Gene ID: -
Gene Symbol: Nop53
Alias: 9430097C02Rik|Gltscr2
Full Name: NOP53 ribosome biogenesis factor
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 9819 bases
Position: chr7:8391828-8401646
Accession: 2154441
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0080807	Nop53	PF07767.11	2.6e-100	1	1
MGP_SPRETEiJ_P0080809	Nop53	PF07767.11	3.6e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0080807	-	3182	-	MGP_SPRETEiJ_P0080807	484 (aa)	-	-
MGP_SPRETEiJ_T0080809	-	1454	-	MGP_SPRETEiJ_P0080809	188 (aa)	-	-
MGP_SPRETEiJ_T0080808	-	1790	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0080810	-	444	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0030298's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0030298's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0030298	Nop53	100	80.165	ENSG00000105373	NOP53	99	93.827	Homo_sapiens
MGP_SPRETEiJ_G0030298	Nop53	88	45.708	ENSAPOG00000006446	nop53	97	44.946	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0030298	Nop53	99	74.297	ENSAMEG00000015214	NOP53	100	74.096	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0030298	Nop53	80	54.000	ENSACIG00000002467	nop53	98	46.409	Amphilophus_citrinellus
MGP_SPRETEiJ_G0030298	Nop53	80	54.667	ENSAOCG00000007002	nop53	97	45.905	Amphiprion_ocellaris
MGP_SPRETEiJ_G0030298	Nop53	80	54.667	ENSAPEG00000024564	nop53	97	46.022	Amphiprion_percula
MGP_SPRETEiJ_G0030298	Nop53	92	45.916	ENSATEG00000021860	nop53	97	46.137	Anabas_testudineus
MGP_SPRETEiJ_G0030298	Nop53	99	55.497	ENSACAG00000011362	-	100	55.853	Anolis_carolinensis
MGP_SPRETEiJ_G0030298	Nop53	99	79.144	ENSANAG00000007933	NOP53	100	73.548	Aotus_nancymaae
MGP_SPRETEiJ_G0030298	Nop53	88	46.495	ENSACLG00000011832	nop53	97	45.763	Astatotilapia_calliptera
MGP_SPRETEiJ_G0030298	Nop53	80	56.291	ENSAMXG00000014883	nop53	89	48.478	Astyanax_mexicanus
MGP_SPRETEiJ_G0030298	Nop53	100	79.787	ENSBTAG00000021192	NOP53	91	78.099	Bos_taurus
MGP_SPRETEiJ_G0030298	Nop53	100	80.165	ENSCJAG00000011385	NOP53	100	80.247	Callithrix_jacchus
MGP_SPRETEiJ_G0030298	Nop53	99	80.208	ENSCAFG00000004080	NOP53	100	79.098	Canis_familiaris
MGP_SPRETEiJ_G0030298	Nop53	99	80.214	ENSCHIG00000009393	NOP53	100	78.675	Capra_hircus
MGP_SPRETEiJ_G0030298	Nop53	98	71.186	ENSTSYG00000036631	NOP53	97	71.338	Carlito_syrichta
MGP_SPRETEiJ_G0030298	Nop53	99	79.679	ENSCAPG00000013148	NOP53	100	80.299	Cavia_aperea
MGP_SPRETEiJ_G0030298	Nop53	99	80.290	ENSCPOG00000015665	NOP53	99	80.290	Cavia_porcellus
MGP_SPRETEiJ_G0030298	Nop53	100	81.383	ENSCCAG00000025477	NOP53	100	81.198	Cebus_capucinus
MGP_SPRETEiJ_G0030298	Nop53	100	81.383	ENSCATG00000032842	NOP53	100	80.579	Cercocebus_atys
MGP_SPRETEiJ_G0030298	Nop53	100	79.255	ENSCLAG00000001860	NOP53	100	77.823	Chinchilla_lanigera
MGP_SPRETEiJ_G0030298	Nop53	100	80.372	ENSCSAG00000002928	NOP53	100	80.785	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0030298	Nop53	99	59.893	ENSCPBG00000009047	NOP53	95	59.036	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0030298	Nop53	88	31.507	ENSCING00000021395	-	96	32.127	Ciona_intestinalis
MGP_SPRETEiJ_G0030298	Nop53	100	38.144	ENSCSAVG00000006009	-	95	34.004	Ciona_savignyi
MGP_SPRETEiJ_G0030298	Nop53	100	80.851	ENSCANG00000039648	NOP53	100	74.793	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0030298	Nop53	100	85.950	ENSCGRG00001019033	Nop53	100	85.950	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0030298	Nop53	88	43.151	ENSCSEG00000014834	nop53	89	43.665	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0030298	Nop53	88	47.816	ENSCVAG00000005940	nop53	97	46.849	Cyprinodon_variegatus
MGP_SPRETEiJ_G0030298	Nop53	99	51.613	ENSDARG00000100452	nop53	100	51.813	Danio_rerio
MGP_SPRETEiJ_G0030298	Nop53	100	80.319	ENSDNOG00000005165	NOP53	91	79.959	Dasypus_novemcinctus
MGP_SPRETEiJ_G0030298	Nop53	60	80.345	ENSDORG00000016339	-	100	80.345	Dipodomys_ordii
MGP_SPRETEiJ_G0030298	Nop53	99	72.043	ENSETEG00000003679	-	57	72.523	Echinops_telfairi
MGP_SPRETEiJ_G0030298	Nop53	95	42.082	ENSEBUG00000012747	nop53	91	43.836	Eptatretus_burgeri
MGP_SPRETEiJ_G0030298	Nop53	100	78.926	ENSEASG00005004345	NOP53	96	79.339	Equus_asinus_asinus
MGP_SPRETEiJ_G0030298	Nop53	100	78.756	ENSECAG00000026850	NOP53	96	79.346	Equus_caballus
MGP_SPRETEiJ_G0030298	Nop53	100	68.388	ENSEEUG00000005287	NOP53	87	93.939	Erinaceus_europaeus
MGP_SPRETEiJ_G0030298	Nop53	88	49.423	ENSELUG00000001525	nop53	89	50.808	Esox_lucius
MGP_SPRETEiJ_G0030298	Nop53	100	81.053	ENSFCAG00000010861	NOP53	100	79.218	Felis_catus
MGP_SPRETEiJ_G0030298	Nop53	99	66.530	ENSFDAG00000010478	NOP53	100	66.189	Fukomys_damarensis
MGP_SPRETEiJ_G0030298	Nop53	88	48.019	ENSFHEG00000017763	nop53	98	45.791	Fundulus_heteroclitus
MGP_SPRETEiJ_G0030298	Nop53	88	44.471	ENSGMOG00000014299	nop53	88	44.471	Gadus_morhua
MGP_SPRETEiJ_G0030298	Nop53	96	52.743	ENSGALG00000039473	NOP53	77	53.165	Gallus_gallus
MGP_SPRETEiJ_G0030298	Nop53	95	44.043	ENSGAFG00000013301	nop53	95	44.842	Gambusia_affinis
MGP_SPRETEiJ_G0030298	Nop53	80	56.954	ENSGACG00000005766	nop53	96	47.134	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0030298	Nop53	98	70.711	ENSGGOG00000024728	-	100	71.516	Gorilla_gorilla
MGP_SPRETEiJ_G0030298	Nop53	99	80.214	ENSGGOG00000005462	NOP53	100	77.640	Gorilla_gorilla
MGP_SPRETEiJ_G0030298	Nop53	88	46.759	ENSHBUG00000023625	nop53	97	46.154	Haplochromis_burtoni
MGP_SPRETEiJ_G0030298	Nop53	99	78.395	ENSHGLG00000018240	NOP53	100	78.395	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0030298	Nop53	79	88.189	ENSHGLG00100015613	NOP53	100	88.189	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0030298	Nop53	88	44.444	ENSHCOG00000017133	nop53	97	43.312	Hippocampus_comes
MGP_SPRETEiJ_G0030298	Nop53	84	57.325	ENSIPUG00000008154	nop53	78	52.000	Ictalurus_punctatus
MGP_SPRETEiJ_G0030298	Nop53	100	83.511	ENSSTOG00000022092	NOP53	100	82.851	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0030298	Nop53	99	82.353	ENSJJAG00000007854	Nop53	100	82.402	Jaculus_jaculus
MGP_SPRETEiJ_G0030298	Nop53	89	46.429	ENSKMAG00000020756	nop53	97	43.709	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0030298	Nop53	88	46.279	ENSLBEG00000011432	nop53	97	45.745	Labrus_bergylta
MGP_SPRETEiJ_G0030298	Nop53	100	55.851	ENSLACG00000018320	NOP53	100	50.361	Latimeria_chalumnae
MGP_SPRETEiJ_G0030298	Nop53	85	54.717	ENSLOCG00000014178	nop53	88	50.820	Lepisosteus_oculatus
MGP_SPRETEiJ_G0030298	Nop53	100	80.579	ENSMFAG00000045103	NOP53	100	80.992	Macaca_fascicularis
MGP_SPRETEiJ_G0030298	Nop53	100	80.579	ENSMMUG00000013348	NOP53	99	93.827	Macaca_mulatta
MGP_SPRETEiJ_G0030298	Nop53	100	80.372	ENSMNEG00000042540	NOP53	96	80.785	Macaca_nemestrina
MGP_SPRETEiJ_G0030298	Nop53	99	68.916	ENSMLEG00000032475	NOP53	100	68.916	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0030298	Nop53	80	58.667	ENSMAMG00000012652	nop53	97	46.285	Mastacembelus_armatus
MGP_SPRETEiJ_G0030298	Nop53	80	53.333	ENSMZEG00005005033	nop53	96	44.301	Maylandia_zebra
MGP_SPRETEiJ_G0030298	Nop53	100	84.917	ENSMAUG00000012617	Nop53	100	84.917	Mesocricetus_auratus
MGP_SPRETEiJ_G0030298	Nop53	99	75.532	ENSMICG00000005580	NOP53	95	77.500	Microcebus_murinus
MGP_SPRETEiJ_G0030298	Nop53	99	88.406	ENSMOCG00000008367	Nop53	100	88.406	Microtus_ochrogaster
MGP_SPRETEiJ_G0030298	Nop53	88	45.902	ENSMMOG00000006515	nop53	96	45.161	Mola_mola
MGP_SPRETEiJ_G0030298	Nop53	100	70.745	ENSMODG00000008721	NOP53	91	68.577	Monodelphis_domestica
MGP_SPRETEiJ_G0030298	Nop53	95	46.695	ENSMALG00000020350	nop53	92	46.695	Monopterus_albus
MGP_SPRETEiJ_G0030298	Nop53	100	98.404	MGP_CAROLIEiJ_G0029218	Nop53	100	98.404	Mus_caroli
MGP_SPRETEiJ_G0030298	Nop53	100	98.936	ENSMUSG00000041560	Nop53	100	98.760	Mus_musculus
MGP_SPRETEiJ_G0030298	Nop53	100	97.340	MGP_PahariEiJ_G0021074	-	100	97.340	Mus_pahari
MGP_SPRETEiJ_G0030298	Nop53	100	79.365	ENSMPUG00000004456	NOP53	100	78.601	Mustela_putorius_furo
MGP_SPRETEiJ_G0030298	Nop53	100	92.126	ENSMLUG00000027066	-	100	79.851	Myotis_lucifugus
MGP_SPRETEiJ_G0030298	Nop53	100	85.185	ENSNGAG00000019894	Nop53	100	85.185	Nannospalax_galili
MGP_SPRETEiJ_G0030298	Nop53	87	41.176	ENSNBRG00000002057	nop53	93	40.860	Neolamprologus_brichardi
MGP_SPRETEiJ_G0030298	Nop53	93	60.089	ENSNLEG00000028326	-	99	60.532	Nomascus_leucogenys
MGP_SPRETEiJ_G0030298	Nop53	100	80.372	ENSNLEG00000003143	NOP53	100	80.785	Nomascus_leucogenys
MGP_SPRETEiJ_G0030298	Nop53	81	66.667	ENSMEUG00000002525	-	100	58.602	Notamacropus_eugenii
MGP_SPRETEiJ_G0030298	Nop53	99	78.468	ENSODEG00000006707	NOP53	100	79.132	Octodon_degus
MGP_SPRETEiJ_G0030298	Nop53	88	47.222	ENSONIG00000016624	nop53	97	46.429	Oreochromis_niloticus
MGP_SPRETEiJ_G0030298	Nop53	93	50.857	ENSORLG00000008659	nop53	96	45.806	Oryzias_latipes
MGP_SPRETEiJ_G0030298	Nop53	93	50.286	ENSORLG00020019916	nop53	93	43.011	Oryzias_latipes_hni
MGP_SPRETEiJ_G0030298	Nop53	88	47.209	ENSORLG00015001315	nop53	97	47.134	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0030298	Nop53	98	49.462	ENSOMEG00000018244	nop53	98	46.218	Oryzias_melastigma
MGP_SPRETEiJ_G0030298	Nop53	99	60.437	ENSOARG00000011414	NOP53	100	60.437	Ovis_aries
MGP_SPRETEiJ_G0030298	Nop53	99	68.449	ENSPPAG00000032995	-	100	66.460	Pan_paniscus
MGP_SPRETEiJ_G0030298	Nop53	99	71.277	ENSPPAG00000029337	-	100	69.672	Pan_paniscus
MGP_SPRETEiJ_G0030298	Nop53	100	78.926	ENSPPAG00000002927	-	100	79.339	Pan_paniscus
MGP_SPRETEiJ_G0030298	Nop53	100	80.526	ENSPPRG00000008954	NOP53	100	78.601	Panthera_pardus
MGP_SPRETEiJ_G0030298	Nop53	99	71.277	ENSPTRG00000052493	-	100	69.877	Pan_troglodytes
MGP_SPRETEiJ_G0030298	Nop53	99	80.214	ENSPTRG00000043520	-	100	76.605	Pan_troglodytes
MGP_SPRETEiJ_G0030298	Nop53	100	80.992	ENSPTRG00000011215	NOP53	100	81.405	Pan_troglodytes
MGP_SPRETEiJ_G0030298	Nop53	100	80.579	ENSPANG00000002964	NOP53	100	80.992	Papio_anubis
MGP_SPRETEiJ_G0030298	Nop53	88	50.585	ENSPKIG00000000127	nop53	88	50.118	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0030298	Nop53	98	48.108	ENSPMGG00000021579	nop53	96	46.452	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0030298	Nop53	100	90.426	ENSPEMG00000006856	Nop53	100	90.083	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0030298	Nop53	65	59.836	ENSPMAG00000009638	-	94	59.836	Petromyzon_marinus
MGP_SPRETEiJ_G0030298	Nop53	99	70.053	ENSPCIG00000016718	NOP53	100	65.092	Phascolarctos_cinereus
MGP_SPRETEiJ_G0030298	Nop53	88	47.552	ENSPFOG00000002839	nop53	89	47.552	Poecilia_formosa
MGP_SPRETEiJ_G0030298	Nop53	88	47.552	ENSPLAG00000006675	nop53	89	47.552	Poecilia_latipinna
MGP_SPRETEiJ_G0030298	Nop53	88	47.319	ENSPMEG00000009589	nop53	98	46.347	Poecilia_mexicana
MGP_SPRETEiJ_G0030298	Nop53	88	43.529	ENSPREG00000008711	nop53	96	42.275	Poecilia_reticulata
MGP_SPRETEiJ_G0030298	Nop53	100	73.967	ENSPPYG00000010181	NOP53	100	74.380	Pongo_abelii
MGP_SPRETEiJ_G0030298	Nop53	100	78.756	ENSPCAG00000007692	NOP53	99	76.101	Procavia_capensis
MGP_SPRETEiJ_G0030298	Nop53	89	81.250	ENSPCOG00000016124	NOP53	100	78.425	Propithecus_coquereli
MGP_SPRETEiJ_G0030298	Nop53	99	77.083	ENSPVAG00000014671	NOP53	84	77.736	Pteropus_vampyrus
MGP_SPRETEiJ_G0030298	Nop53	88	46.729	ENSPNYG00000001341	nop53	97	45.975	Pundamilia_nyererei
MGP_SPRETEiJ_G0030298	Nop53	80	58.940	ENSPNAG00000012520	nop53	89	51.515	Pygocentrus_nattereri
MGP_SPRETEiJ_G0030298	Nop53	100	92.355	ENSRNOG00000013023	Nop53	100	92.355	Rattus_norvegicus
MGP_SPRETEiJ_G0030298	Nop53	100	80.319	ENSRBIG00000036427	NOP53	100	80.579	Rhinopithecus_bieti
MGP_SPRETEiJ_G0030298	Nop53	100	80.851	ENSRROG00000042298	NOP53	100	80.785	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0030298	Nop53	100	78.723	ENSSBOG00000033115	NOP53	100	79.835	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0030298	Nop53	100	71.809	ENSSHAG00000002239	NOP53	100	67.070	Sarcophilus_harrisii
MGP_SPRETEiJ_G0030298	Nop53	88	52.113	ENSSFOG00015007062	gltscr2	96	50.215	Scleropages_formosus
MGP_SPRETEiJ_G0030298	Nop53	88	47.332	ENSSMAG00000000212	nop53	89	47.332	Scophthalmus_maximus
MGP_SPRETEiJ_G0030298	Nop53	88	47.086	ENSSDUG00000010575	nop53	97	46.908	Seriola_dumerili
MGP_SPRETEiJ_G0030298	Nop53	88	46.370	ENSSLDG00000000140	nop53	94	46.253	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0030298	Nop53	99	76.471	ENSSARG00000014109	NOP53	83	80.000	Sorex_araneus
MGP_SPRETEiJ_G0030298	Nop53	98	59.893	ENSSPUG00000004420	NOP53	98	47.447	Sphenodon_punctatus
MGP_SPRETEiJ_G0030298	Nop53	88	45.370	ENSSPAG00000000318	nop53	97	45.666	Stegastes_partitus
MGP_SPRETEiJ_G0030298	Nop53	99	76.190	ENSSSCG00000022774	NOP53	100	75.464	Sus_scrofa
MGP_SPRETEiJ_G0030298	Nop53	80	54.000	ENSTRUG00000004944	nop53	97	44.444	Takifugu_rubripes
MGP_SPRETEiJ_G0030298	Nop53	79	89.764	ENSTBEG00000008708	NOP53	80	89.764	Tupaia_belangeri
MGP_SPRETEiJ_G0030298	Nop53	100	79.058	ENSTTRG00000011831	NOP53	100	77.618	Tursiops_truncatus
MGP_SPRETEiJ_G0030298	Nop53	99	76.543	ENSUAMG00000028254	NOP53	100	74.438	Ursus_americanus
MGP_SPRETEiJ_G0030298	Nop53	78	77.428	ENSVVUG00000023365	NOP53	77	75.835	Vulpes_vulpes
MGP_SPRETEiJ_G0030298	Nop53	93	66.372	ENSXETG00000002782	nop53	99	49.367	Xenopus_tropicalis
MGP_SPRETEiJ_G0030298	Nop53	98	50.270	ENSXCOG00000004436	nop53	98	46.639	Xiphophorus_couchianus
MGP_SPRETEiJ_G0030298	Nop53	98	50.270	ENSXMAG00000002589	nop53	98	46.281	Xiphophorus_maculatus