EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0030312 (Gene tree)
Gene ID: -
Gene Symbol: Zc3h4
Alias: Bwq1|Kiaa1064-hp|LOC330474
Full Name: zinc finger CCCH-type containing 4
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 40805 bases
Position: chr7:8882171-8922975
Accession: 2682314
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0080862	zf-CCCH	PF00642.24	7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0080862	-	6054	-	MGP_SPRETEiJ_P0080862	1258 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0030312's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0030312's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0030312	Zc3h4	87	34.646	MGP_SPRETEiJ_G0025198	Zc3h6	65	49.541

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0030312	Zc3h4	98	88.329	ENSG00000130749	ZC3H4	93	88.219	Homo_sapiens
MGP_SPRETEiJ_G0030312	Zc3h4	98	84.505	ENSANAG00000023963	ZC3H4	95	85.646	Aotus_nancymaae
MGP_SPRETEiJ_G0030312	Zc3h4	98	86.752	ENSBTAG00000009286	ZC3H4	95	85.339	Bos_taurus
MGP_SPRETEiJ_G0030312	Zc3h4	98	85.280	ENSCJAG00000011601	ZC3H4	95	86.640	Callithrix_jacchus
MGP_SPRETEiJ_G0030312	Zc3h4	98	82.923	ENSCAFG00000004182	ZC3H4	95	83.267	Canis_familiaris
MGP_SPRETEiJ_G0030312	Zc3h4	98	79.061	ENSCHIG00000013956	ZC3H4	95	83.652	Capra_hircus
MGP_SPRETEiJ_G0030312	Zc3h4	89	88.296	ENSTSYG00000000926	ZC3H4	96	87.936	Carlito_syrichta
MGP_SPRETEiJ_G0030312	Zc3h4	98	85.931	ENSCCAG00000037597	ZC3H4	96	86.853	Cebus_capucinus
MGP_SPRETEiJ_G0030312	Zc3h4	98	86.171	ENSCATG00000039046	ZC3H4	95	85.235	Cercocebus_atys
MGP_SPRETEiJ_G0030312	Zc3h4	94	85.340	ENSCLAG00000001032	ZC3H4	100	85.847	Chinchilla_lanigera
MGP_SPRETEiJ_G0030312	Zc3h4	98	86.890	ENSCSAG00000002989	ZC3H4	98	85.954	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0030312	Zc3h4	85	97.100	ENSCGRG00001016116	Zc3h4	100	97.100	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0030312	Zc3h4	98	82.508	ENSDNOG00000003764	ZC3H4	95	83.333	Dasypus_novemcinctus
MGP_SPRETEiJ_G0030312	Zc3h4	100	82.506	ENSDORG00000002726	Zc3h4	100	84.500	Dipodomys_ordii
MGP_SPRETEiJ_G0030312	Zc3h4	76	96.703	ENSETEG00000005763	ZC3H4	74	96.739	Echinops_telfairi
MGP_SPRETEiJ_G0030312	Zc3h4	98	86.364	ENSECAG00000024342	ZC3H4	99	85.350	Equus_caballus
MGP_SPRETEiJ_G0030312	Zc3h4	81	78.571	ENSEEUG00000000519	ZC3H4	74	75.817	Erinaceus_europaeus
MGP_SPRETEiJ_G0030312	Zc3h4	98	87.310	ENSFCAG00000004835	ZC3H4	95	86.353	Felis_catus
MGP_SPRETEiJ_G0030312	Zc3h4	98	88.409	ENSGGOG00000013071	ZC3H4	95	86.113	Gorilla_gorilla
MGP_SPRETEiJ_G0030312	Zc3h4	94	92.326	ENSSTOG00000016249	ZC3H4	99	92.326	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0030312	Zc3h4	100	89.606	ENSJJAG00000019068	Zc3h4	100	88.994	Jaculus_jaculus
MGP_SPRETEiJ_G0030312	Zc3h4	98	84.542	ENSLAFG00000001586	ZC3H4	95	83.771	Loxodonta_africana
MGP_SPRETEiJ_G0030312	Zc3h4	98	88.249	ENSMFAG00000041518	ZC3H4	95	86.034	Macaca_fascicularis
MGP_SPRETEiJ_G0030312	Zc3h4	98	86.811	ENSMLEG00000007946	ZC3H4	99	85.874	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0030312	Zc3h4	100	96.505	ENSMAUG00000000068	Zc3h4	100	96.505	Mesocricetus_auratus
MGP_SPRETEiJ_G0030312	Zc3h4	98	87.879	ENSMICG00000008786	ZC3H4	95	87.978	Microcebus_murinus
MGP_SPRETEiJ_G0030312	Zc3h4	100	99.285	ENSMUSG00000059273	Zc3h4	100	99.285	Mus_musculus
MGP_SPRETEiJ_G0030312	Zc3h4	100	97.458	MGP_PahariEiJ_G0021089	Zc3h4	100	97.458	Mus_pahari
MGP_SPRETEiJ_G0030312	Zc3h4	95	89.116	ENSMPUG00000005065	ZC3H4	95	87.528	Mustela_putorius_furo
MGP_SPRETEiJ_G0030312	Zc3h4	100	92.009	ENSNGAG00000020090	Zc3h4	100	89.889	Nannospalax_galili
MGP_SPRETEiJ_G0030312	Zc3h4	81	77.778	ENSMEUG00000009167	ZC3H4	73	83.534	Notamacropus_eugenii
MGP_SPRETEiJ_G0030312	Zc3h4	88	88.688	ENSOPRG00000014889	ZC3H4	88	87.783	Ochotona_princeps
MGP_SPRETEiJ_G0030312	Zc3h4	100	85.333	ENSODEG00000008320	ZC3H4	100	85.200	Octodon_degus
MGP_SPRETEiJ_G0030312	Zc3h4	74	64.155	ENSOANG00000001794	ZC3H4	53	69.469	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0030312	Zc3h4	98	87.161	ENSOGAG00000031123	ZC3H4	77	87.354	Otolemur_garnettii
MGP_SPRETEiJ_G0030312	Zc3h4	98	85.235	ENSPPRG00000023272	ZC3H4	95	84.597	Panthera_pardus
MGP_SPRETEiJ_G0030312	Zc3h4	83	93.846	ENSPTIG00000014229	ZC3H4	93	93.846	Panthera_tigris_altaica
MGP_SPRETEiJ_G0030312	Zc3h4	98	88.329	ENSPTRG00000011201	ZC3H4	95	86.034	Pan_troglodytes
MGP_SPRETEiJ_G0030312	Zc3h4	98	88.569	ENSPANG00000021115	ZC3H4	95	86.193	Papio_anubis
MGP_SPRETEiJ_G0030312	Zc3h4	98	69.323	ENSPSIG00000002241	ZC3H4	74	70.947	Pelodiscus_sinensis
MGP_SPRETEiJ_G0030312	Zc3h4	100	96.823	ENSPEMG00000009762	Zc3h4	100	96.823	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0030312	Zc3h4	92	88.204	ENSPPYG00000010167	ZC3H4	94	86.704	Pongo_abelii
MGP_SPRETEiJ_G0030312	Zc3h4	74	80.365	ENSPCAG00000014919	ZC3H4	93	81.370	Procavia_capensis
MGP_SPRETEiJ_G0030312	Zc3h4	98	86.204	ENSPCOG00000017169	ZC3H4	95	85.748	Propithecus_coquereli
MGP_SPRETEiJ_G0030312	Zc3h4	94	83.822	ENSPVAG00000005687	ZC3H4	89	83.673	Pteropus_vampyrus
MGP_SPRETEiJ_G0030312	Zc3h4	94	96.393	ENSRNOG00000015229	Zc3h4	100	87.222	Rattus_norvegicus
MGP_SPRETEiJ_G0030312	Zc3h4	98	86.731	ENSRROG00000032920	ZC3H4	95	85.452	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0030312	Zc3h4	92	88.107	ENSSBOG00000030914	ZC3H4	99	88.835	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0030312	Zc3h4	84	86.076	ENSSARG00000014146	ZC3H4	82	87.407	Sorex_araneus
MGP_SPRETEiJ_G0030312	Zc3h4	78	88.507	ENSSSCG00000003110	ZC3H4	82	70.775	Sus_scrofa
MGP_SPRETEiJ_G0030312	Zc3h4	94	84.211	ENSVVUG00000000208	ZC3H4	98	83.922	Vulpes_vulpes