EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0030346 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 41031 bases
Position: chr7:11302371-11343401
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0080970	KH_1	PF00013.29	4.5e-47	1	3
MGP_SPRETEiJ_P0080970	KH_1	PF00013.29	4.5e-47	2	3
MGP_SPRETEiJ_P0080970	KH_1	PF00013.29	4.5e-47	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0080970	-	1479	-	MGP_SPRETEiJ_P0080970	492 (aa)	-	UPI0001CB7F8E

Gene Model

Click here to download MGP_SPRETEiJ_G0030346's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0030346's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0030346	-	100	100.000	MGP_SPRETEiJ_G0030345	-	89	100.000
MGP_SPRETEiJ_G0030346	-	100	67.816	MGP_SPRETEiJ_G0018570	Nova1	64	73.333
MGP_SPRETEiJ_G0030346	-	54	41.538	MGP_SPRETEiJ_G0033768	-	76	41.538
MGP_SPRETEiJ_G0030346	-	54	36.765	MGP_SPRETEiJ_G0026693	Fubp1	61	36.765
MGP_SPRETEiJ_G0030346	-	54	37.681	MGP_SPRETEiJ_G0019479	Hnrnpk	57	37.681
MGP_SPRETEiJ_G0030346	-	50	41.096	MGP_SPRETEiJ_G0021246	Pcbp2	68	41.096
MGP_SPRETEiJ_G0030346	-	51	41.558	MGP_SPRETEiJ_G0029609	Pcbp1	66	41.558

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0030346	-	100	98.577	ENSG00000104967	NOVA2	100	100.000	Homo_sapiens
MGP_SPRETEiJ_G0030346	-	68	100.000	ENSAMEG00000000649	NOVA2	92	100.000	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0030346	-	95	80.932	ENSACAG00000003724	NOVA2	61	89.286	Anolis_carolinensis
MGP_SPRETEiJ_G0030346	-	100	84.553	ENSANAG00000022520	NOVA2	60	85.948	Aotus_nancymaae
MGP_SPRETEiJ_G0030346	-	100	98.577	ENSBTAG00000013157	NOVA2	100	98.577	Bos_taurus
MGP_SPRETEiJ_G0030346	-	100	98.577	ENSCJAG00000012121	NOVA2	89	98.577	Callithrix_jacchus
MGP_SPRETEiJ_G0030346	-	94	98.491	ENSCAFG00000004359	NOVA2	97	93.902	Canis_familiaris
MGP_SPRETEiJ_G0030346	-	100	98.577	ENSCAFG00020001763	NOVA2	67	98.577	Canis_lupus_dingo
MGP_SPRETEiJ_G0030346	-	100	98.577	ENSCHIG00000010547	NOVA2	89	98.577	Capra_hircus
MGP_SPRETEiJ_G0030346	-	69	100.000	ENSCPOG00000020582	NOVA2	90	100.000	Cavia_porcellus
MGP_SPRETEiJ_G0030346	-	100	98.577	ENSCCAG00000037311	NOVA2	88	98.577	Cebus_capucinus
MGP_SPRETEiJ_G0030346	-	100	98.577	ENSCATG00000045122	NOVA2	100	98.577	Cercocebus_atys
MGP_SPRETEiJ_G0030346	-	60	99.219	ENSCLAG00000000991	-	86	99.219	Chinchilla_lanigera
MGP_SPRETEiJ_G0030346	-	100	95.122	ENSCSAG00000003105	NOVA2	97	95.122	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0030346	-	99	81.855	ENSCPBG00000007153	NOVA2	58	89.680	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0030346	-	97	43.927	ENSCSAVG00000009137	-	88	61.176	Ciona_savignyi
MGP_SPRETEiJ_G0030346	-	100	99.797	ENSCGRG00001013374	Nova2	91	99.797	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0030346	-	94	98.491	ENSDNOG00000031258	NOVA2	99	94.661	Dasypus_novemcinctus
MGP_SPRETEiJ_G0030346	-	100	100.000	ENSDORG00000026568	Nova2	97	100.000	Dipodomys_ordii
MGP_SPRETEiJ_G0030346	-	68	55.556	ENSEBUG00000004758	-	84	55.556	Eptatretus_burgeri
MGP_SPRETEiJ_G0030346	-	95	64.026	ENSEBUG00000012405	NOVA2	78	68.929	Eptatretus_burgeri
MGP_SPRETEiJ_G0030346	-	99	94.888	ENSEASG00005014236	NOVA2	99	94.888	Equus_asinus_asinus
MGP_SPRETEiJ_G0030346	-	62	83.007	ENSECAG00000024041	NOVA2	88	88.211	Equus_caballus
MGP_SPRETEiJ_G0030346	-	100	98.171	ENSFCAG00000024784	NOVA2	100	98.171	Felis_catus
MGP_SPRETEiJ_G0030346	-	95	81.818	ENSGAGG00000009498	NOVA2	61	90.647	Gopherus_agassizii
MGP_SPRETEiJ_G0030346	-	94	94.206	ENSGGOG00000000325	NOVA2	100	94.206	Gorilla_gorilla
MGP_SPRETEiJ_G0030346	-	100	90.447	ENSHGLG00000016103	NOVA2	94	90.447	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0030346	-	59	100.000	ENSHGLG00100015153	NOVA2	100	100.000	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0030346	-	97	96.218	ENSSTOG00000022126	NOVA2	100	96.218	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0030346	-	67	97.980	ENSJJAG00000000944	Nova2	100	100.000	Jaculus_jaculus
MGP_SPRETEiJ_G0030346	-	94	95.708	ENSLAFG00000025917	NOVA2	100	95.708	Loxodonta_africana
MGP_SPRETEiJ_G0030346	-	76	100.000	ENSMFAG00000043672	NOVA2	72	100.000	Macaca_fascicularis
MGP_SPRETEiJ_G0030346	-	100	83.943	ENSMMUG00000004085	NOVA2	67	99.673	Macaca_mulatta
MGP_SPRETEiJ_G0030346	-	100	96.341	ENSMNEG00000040253	NOVA2	87	96.341	Macaca_nemestrina
MGP_SPRETEiJ_G0030346	-	97	100.000	ENSMLEG00000030389	NOVA2	100	100.000	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0030346	-	100	91.057	ENSMAUG00000014038	Nova2	98	91.057	Mesocricetus_auratus
MGP_SPRETEiJ_G0030346	-	100	98.577	ENSMICG00000028720	NOVA2	100	98.577	Microcebus_murinus
MGP_SPRETEiJ_G0030346	-	100	100.000	ENSMOCG00000018489	Nova2	92	100.000	Microtus_ochrogaster
MGP_SPRETEiJ_G0030346	-	58	89.583	ENSMODG00000021529	NOVA2	77	89.931	Monodelphis_domestica
MGP_SPRETEiJ_G0030346	-	94	100.000	MGP_CAROLIEiJ_G0029262	-	100	100.000	Mus_caroli
MGP_SPRETEiJ_G0030346	-	94	100.000	MGP_CAROLIEiJ_G0029261	-	100	100.000	Mus_caroli
MGP_SPRETEiJ_G0030346	-	100	100.000	ENSMUSG00000030411	Nova2	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0030346	-	100	100.000	MGP_PahariEiJ_G0021121	-	94	100.000	Mus_pahari
MGP_SPRETEiJ_G0030346	-	100	100.000	MGP_PahariEiJ_G0021122	-	100	100.000	Mus_pahari
MGP_SPRETEiJ_G0030346	-	64	97.753	ENSMPUG00000005444	NOVA2	99	97.753	Mustela_putorius_furo
MGP_SPRETEiJ_G0030346	-	77	100.000	ENSNGAG00000014104	Nova2	95	100.000	Nannospalax_galili
MGP_SPRETEiJ_G0030346	-	76	87.908	ENSNLEG00000002399	-	100	87.908	Nomascus_leucogenys
MGP_SPRETEiJ_G0030346	-	62	79.545	ENSMEUG00000000562	NOVA2	79	79.870	Notamacropus_eugenii
MGP_SPRETEiJ_G0030346	-	61	99.038	ENSOPRG00000010051	NOVA2	68	100.000	Ochotona_princeps
MGP_SPRETEiJ_G0030346	-	100	89.837	ENSODEG00000008485	NOVA2	96	89.837	Octodon_degus
MGP_SPRETEiJ_G0030346	-	100	85.569	ENSOCUG00000022891	NOVA2	100	100.000	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0030346	-	99	98.163	ENSOGAG00000028973	NOVA2	95	98.163	Otolemur_garnettii
MGP_SPRETEiJ_G0030346	-	59	100.000	ENSOARG00000010434	-	72	100.000	Ovis_aries
MGP_SPRETEiJ_G0030346	-	96	97.266	ENSPPAG00000035049	-	100	100.000	Pan_paniscus
MGP_SPRETEiJ_G0030346	-	95	98.507	ENSPPRG00000005941	NOVA2	96	98.507	Panthera_pardus
MGP_SPRETEiJ_G0030346	-	61	100.000	ENSPTIG00000015368	NOVA2	64	100.000	Panthera_tigris_altaica
MGP_SPRETEiJ_G0030346	-	100	98.577	ENSPTRG00000011173	NOVA2	100	98.577	Pan_troglodytes
MGP_SPRETEiJ_G0030346	-	94	98.488	ENSPANG00000023868	NOVA2	96	98.488	Papio_anubis
MGP_SPRETEiJ_G0030346	-	55	95.105	ENSPSIG00000006125	-	85	95.105	Pelodiscus_sinensis
MGP_SPRETEiJ_G0030346	-	62	95.455	ENSPCIG00000007632	NOVA2	59	95.779	Phascolarctos_cinereus
MGP_SPRETEiJ_G0030346	-	84	91.768	ENSPPYG00000010139	-	99	91.768	Pongo_abelii
MGP_SPRETEiJ_G0030346	-	100	95.122	ENSPCOG00000022693	NOVA2	98	98.073	Propithecus_coquereli
MGP_SPRETEiJ_G0030346	-	98	93.347	ENSPVAG00000006169	NOVA2	100	93.347	Pteropus_vampyrus
MGP_SPRETEiJ_G0030346	-	99	99.184	ENSRNOG00000013847	Nova2	99	99.184	Rattus_norvegicus
MGP_SPRETEiJ_G0030346	-	70	100.000	ENSRROG00000037399	NOVA2	76	100.000	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0030346	-	60	87.500	ENSSBOG00000001000	-	84	87.500	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0030346	-	78	92.135	ENSSPUG00000002591	NOVA2	94	88.542	Sphenodon_punctatus
MGP_SPRETEiJ_G0030346	-	100	98.171	ENSSSCG00000035029	NOVA2	100	98.171	Sus_scrofa
MGP_SPRETEiJ_G0030346	-	100	79.677	ENSTRUG00000019498	NOVA2	96	87.500	Takifugu_rubripes
MGP_SPRETEiJ_G0030346	-	97	95.642	ENSTTRG00000001612	NOVA2	100	95.642	Tursiops_truncatus
MGP_SPRETEiJ_G0030346	-	62	99.673	ENSUAMG00000015647	NOVA2	68	99.673	Ursus_americanus
MGP_SPRETEiJ_G0030346	-	60	98.374	ENSVVUG00000002971	-	57	98.374	Vulpes_vulpes
MGP_SPRETEiJ_G0030346	-	100	58.635	ENSXETG00000019101	nova2	89	81.443	Xenopus_tropicalis