EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0030351 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 30182 bases
Position: chr7:11409250-11439431
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0080983	Symplekin_C	PF12295.8	5.6e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0080984	-	636	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0080979	-	4585	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0080978	-	822	-	MGP_SPRETEiJ_P0080978	198 (aa)	-	UPI00015AA482
MGP_SPRETEiJ_T0080980	-	4811	-	MGP_SPRETEiJ_P0080980	234 (aa)	-	UPI000333526D
MGP_SPRETEiJ_T0080981	-	799	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0080982	-	1063	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0080983	-	469	-	MGP_SPRETEiJ_P0080983	142 (aa)	-	-
MGP_SPRETEiJ_T0080977	-	4084	-	MGP_SPRETEiJ_P0080977	1276 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0030351's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0030351's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0030351	-	100	93.380	ENSG00000125755	SYMPK	100	98.592	Homo_sapiens
MGP_SPRETEiJ_G0030351	-	77	87.156	ENSAPOG00000015934	sympk	97	73.550	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0030351	-	100	93.292	ENSAMEG00000000680	SYMPK	100	93.292	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0030351	-	77	85.321	ENSACIG00000006357	sympk	92	74.544	Amphilophus_citrinellus
MGP_SPRETEiJ_G0030351	-	77	87.156	ENSAOCG00000024124	sympk	96	71.972	Amphiprion_ocellaris
MGP_SPRETEiJ_G0030351	-	77	87.156	ENSAPEG00000003465	sympk	92	73.422	Amphiprion_percula
MGP_SPRETEiJ_G0030351	-	77	87.156	ENSATEG00000008472	sympk	91	74.350	Anabas_testudineus
MGP_SPRETEiJ_G0030351	-	77	96.330	ENSACAG00000004126	SYMPK	97	79.487	Anolis_carolinensis
MGP_SPRETEiJ_G0030351	-	100	93.838	ENSANAG00000021087	SYMPK	100	99.200	Aotus_nancymaae
MGP_SPRETEiJ_G0030351	-	77	86.239	ENSACLG00000001813	sympk	91	74.283	Astatotilapia_calliptera
MGP_SPRETEiJ_G0030351	-	77	87.156	ENSAMXG00000013677	sympk	91	73.684	Astyanax_mexicanus
MGP_SPRETEiJ_G0030351	-	100	92.746	ENSBTAG00000012101	SYMPK	100	93.058	Bos_taurus
MGP_SPRETEiJ_G0030351	-	96	96.593	ENSCJAG00000012172	SYMPK	99	95.767	Callithrix_jacchus
MGP_SPRETEiJ_G0030351	-	100	93.395	ENSCAFG00000004376	SYMPK	100	93.240	Canis_familiaris
MGP_SPRETEiJ_G0030351	-	100	93.395	ENSCAFG00020001815	SYMPK	100	93.240	Canis_lupus_dingo
MGP_SPRETEiJ_G0030351	-	100	93.214	ENSCHIG00000026784	SYMPK	100	93.214	Capra_hircus
MGP_SPRETEiJ_G0030351	-	100	93.385	ENSTSYG00000006268	SYMPK	100	97.600	Carlito_syrichta
MGP_SPRETEiJ_G0030351	-	83	94.653	ENSCAPG00000005112	SYMPK	96	94.653	Cavia_aperea
MGP_SPRETEiJ_G0030351	-	100	90.000	ENSCPOG00000010434	SYMPK	100	89.767	Cavia_porcellus
MGP_SPRETEiJ_G0030351	-	100	93.755	ENSCCAG00000036309	SYMPK	100	99.200	Cebus_capucinus
MGP_SPRETEiJ_G0030351	-	100	93.458	ENSCATG00000045107	SYMPK	100	98.400	Cercocebus_atys
MGP_SPRETEiJ_G0030351	-	100	93.677	ENSCLAG00000001206	SYMPK	100	93.521	Chinchilla_lanigera
MGP_SPRETEiJ_G0030351	-	100	93.458	ENSCSAG00000003115	SYMPK	100	93.536	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0030351	-	77	99.083	ENSCHOG00000012456	SYMPK	81	100.000	Choloepus_hoffmanni
MGP_SPRETEiJ_G0030351	-	98	82.911	ENSCPBG00000007170	SYMPK	99	83.373	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0030351	-	77	64.220	ENSCING00000021232	-	96	48.776	Ciona_intestinalis
MGP_SPRETEiJ_G0030351	-	77	63.303	ENSCSAVG00000005154	-	100	47.887	Ciona_savignyi
MGP_SPRETEiJ_G0030351	-	100	91.106	ENSCANG00000040907	SYMPK	100	98.400	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0030351	-	92	93.576	ENSCGRG00001010086	Sympk	100	93.576	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0030351	-	77	84.404	ENSCSEG00000016802	sympk	91	73.722	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0030351	-	77	86.239	ENSCVAG00000015093	sympk	81	73.415	Cyprinodon_variegatus
MGP_SPRETEiJ_G0030351	-	77	85.321	ENSDARG00000059553	sympk	89	73.256	Danio_rerio
MGP_SPRETEiJ_G0030351	-	99	93.065	ENSDNOG00000016149	SYMPK	98	93.065	Dasypus_novemcinctus
MGP_SPRETEiJ_G0030351	-	78	54.955	FBgn0037371	Sym	95	36.444	Drosophila_melanogaster
MGP_SPRETEiJ_G0030351	-	77	81.651	ENSEBUG00000000387	sympk	89	62.673	Eptatretus_burgeri
MGP_SPRETEiJ_G0030351	-	100	93.594	ENSEASG00005014227	SYMPK	100	93.594	Equus_asinus_asinus
MGP_SPRETEiJ_G0030351	-	100	93.594	ENSECAG00000008163	SYMPK	100	93.594	Equus_caballus
MGP_SPRETEiJ_G0030351	-	77	98.165	ENSEEUG00000000270	-	81	94.667	Erinaceus_europaeus
MGP_SPRETEiJ_G0030351	-	77	85.321	ENSELUG00000000850	sympk	88	75.157	Esox_lucius
MGP_SPRETEiJ_G0030351	-	98	97.674	ENSFCAG00000007337	SYMPK	100	93.380	Felis_catus
MGP_SPRETEiJ_G0030351	-	100	93.516	ENSFDAG00000011272	SYMPK	100	93.438	Fukomys_damarensis
MGP_SPRETEiJ_G0030351	-	77	85.321	ENSFHEG00000010274	sympk	90	74.750	Fundulus_heteroclitus
MGP_SPRETEiJ_G0030351	-	77	85.321	ENSGMOG00000002357	sympk	99	72.970	Gadus_morhua
MGP_SPRETEiJ_G0030351	-	77	85.321	ENSGAFG00000010976	sympk	91	74.977	Gambusia_affinis
MGP_SPRETEiJ_G0030351	-	77	87.156	ENSGACG00000002735	sympk	98	74.587	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0030351	-	77	95.413	ENSGAGG00000012538	-	88	84.580	Gopherus_agassizii
MGP_SPRETEiJ_G0030351	-	100	93.458	ENSGGOG00000003410	SYMPK	100	98.400	Gorilla_gorilla
MGP_SPRETEiJ_G0030351	-	77	86.239	ENSHBUG00000023564	sympk	91	74.485	Haplochromis_burtoni
MGP_SPRETEiJ_G0030351	-	100	89.696	ENSHGLG00000005228	SYMPK	100	89.696	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0030351	-	100	89.044	ENSHGLG00100018571	SYMPK	100	89.044	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0030351	-	77	86.239	ENSHCOG00000017400	sympk	91	70.486	Hippocampus_comes
MGP_SPRETEiJ_G0030351	-	77	88.073	ENSIPUG00000024020	SYMPK	95	69.547	Ictalurus_punctatus
MGP_SPRETEiJ_G0030351	-	100	94.301	ENSSTOG00000001534	SYMPK	100	94.301	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0030351	-	100	92.774	ENSJJAG00000006633	Sympk	100	93.085	Jaculus_jaculus
MGP_SPRETEiJ_G0030351	-	77	84.404	ENSKMAG00000016292	sympk	90	74.863	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0030351	-	77	88.073	ENSLBEG00000027913	sympk	96	70.785	Labrus_bergylta
MGP_SPRETEiJ_G0030351	-	77	93.578	ENSLACG00000016497	SYMPK	100	71.078	Latimeria_chalumnae
MGP_SPRETEiJ_G0030351	-	100	92.985	ENSLAFG00000008726	SYMPK	100	93.219	Loxodonta_africana
MGP_SPRETEiJ_G0030351	-	77	99.083	ENSMFAG00000030093	-	90	88.583	Macaca_fascicularis
MGP_SPRETEiJ_G0030351	-	100	93.458	ENSMMUG00000015428	SYMPK	100	98.400	Macaca_mulatta
MGP_SPRETEiJ_G0030351	-	100	93.614	ENSMNEG00000019439	SYMPK	100	98.400	Macaca_nemestrina
MGP_SPRETEiJ_G0030351	-	100	93.614	ENSMLEG00000040508	SYMPK	100	98.400	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0030351	-	77	85.321	ENSMAMG00000010486	sympk	89	74.679	Mastacembelus_armatus
MGP_SPRETEiJ_G0030351	-	77	86.239	ENSMZEG00005014146	sympk	91	74.283	Maylandia_zebra
MGP_SPRETEiJ_G0030351	-	100	93.692	ENSMAUG00000015657	Sympk	100	93.847	Mesocricetus_auratus
MGP_SPRETEiJ_G0030351	-	100	92.996	ENSMICG00000001871	SYMPK	100	96.800	Microcebus_murinus
MGP_SPRETEiJ_G0030351	-	100	96.807	ENSMOCG00000008388	Sympk	100	96.807	Microtus_ochrogaster
MGP_SPRETEiJ_G0030351	-	77	85.321	ENSMMOG00000019227	sympk	93	72.636	Mola_mola
MGP_SPRETEiJ_G0030351	-	97	88.207	ENSMODG00000021534	SYMPK	96	88.093	Monodelphis_domestica
MGP_SPRETEiJ_G0030351	-	73	69.574	ENSMALG00000008347	sympk	96	69.894	Monopterus_albus
MGP_SPRETEiJ_G0030351	-	100	99.296	MGP_CAROLIEiJ_G0029267	Sympk	100	99.296	Mus_caroli
MGP_SPRETEiJ_G0030351	-	100	99.296	ENSMUSG00000023118	Sympk	100	98.835	Mus_musculus
MGP_SPRETEiJ_G0030351	-	100	97.975	MGP_PahariEiJ_G0021127	Sympk	100	97.975	Mus_pahari
MGP_SPRETEiJ_G0030351	-	100	91.524	ENSMPUG00000005505	SYMPK	100	91.524	Mustela_putorius_furo
MGP_SPRETEiJ_G0030351	-	77	99.083	ENSMLUG00000001359	SYMPK	100	90.585	Myotis_lucifugus
MGP_SPRETEiJ_G0030351	-	100	95.156	ENSNGAG00000000820	Sympk	100	95.078	Nannospalax_galili
MGP_SPRETEiJ_G0030351	-	77	85.321	ENSNBRG00000018101	sympk	92	75.070	Neolamprologus_brichardi
MGP_SPRETEiJ_G0030351	-	100	80.280	ENSNLEG00000002369	SYMPK	100	80.512	Nomascus_leucogenys
MGP_SPRETEiJ_G0030351	-	77	98.165	ENSMEUG00000003866	SYMPK	80	89.474	Notamacropus_eugenii
MGP_SPRETEiJ_G0030351	-	100	90.528	ENSOPRG00000009967	SYMPK	100	91.071	Ochotona_princeps
MGP_SPRETEiJ_G0030351	-	100	94.072	ENSODEG00000007519	SYMPK	100	93.838	Octodon_degus
MGP_SPRETEiJ_G0030351	-	77	86.239	ENSONIG00000016802	sympk	96	73.874	Oreochromis_niloticus
MGP_SPRETEiJ_G0030351	-	76	96.684	ENSOCUG00000005511	SYMPK	90	96.684	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0030351	-	77	85.321	ENSORLG00000015338	sympk	96	74.340	Oryzias_latipes
MGP_SPRETEiJ_G0030351	-	77	85.321	ENSORLG00020004402	sympk	90	75.389	Oryzias_latipes_hni
MGP_SPRETEiJ_G0030351	-	77	85.321	ENSORLG00015005712	sympk	90	75.480	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0030351	-	77	85.321	ENSOMEG00000022561	sympk	90	75.092	Oryzias_melastigma
MGP_SPRETEiJ_G0030351	-	100	94.081	ENSOGAG00000013483	SYMPK	100	94.163	Otolemur_garnettii
MGP_SPRETEiJ_G0030351	-	100	88.751	ENSOARG00000010349	SYMPK	100	88.751	Ovis_aries
MGP_SPRETEiJ_G0030351	-	100	93.380	ENSPPAG00000043204	SYMPK	100	98.400	Pan_paniscus
MGP_SPRETEiJ_G0030351	-	100	93.380	ENSPPRG00000004282	SYMPK	100	93.380	Panthera_pardus
MGP_SPRETEiJ_G0030351	-	100	91.193	ENSPTIG00000015420	SYMPK	94	97.674	Panthera_tigris_altaica
MGP_SPRETEiJ_G0030351	-	100	93.380	ENSPTRG00000011169	SYMPK	100	98.400	Pan_troglodytes
MGP_SPRETEiJ_G0030351	-	100	93.380	ENSPANG00000019930	SYMPK	100	98.400	Papio_anubis
MGP_SPRETEiJ_G0030351	-	77	87.156	ENSPKIG00000017132	sympk	96	72.564	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0030351	-	100	96.732	ENSPEMG00000007564	Sympk	100	96.732	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0030351	-	77	84.404	ENSPMAG00000004936	sympk	100	65.580	Petromyzon_marinus
MGP_SPRETEiJ_G0030351	-	98	87.283	ENSPCIG00000024476	SYMPK	99	86.449	Phascolarctos_cinereus
MGP_SPRETEiJ_G0030351	-	77	85.321	ENSPFOG00000001194	sympk	90	74.909	Poecilia_formosa
MGP_SPRETEiJ_G0030351	-	77	85.321	ENSPLAG00000012995	sympk	90	74.819	Poecilia_latipinna
MGP_SPRETEiJ_G0030351	-	77	85.321	ENSPMEG00000008099	sympk	90	74.819	Poecilia_mexicana
MGP_SPRETEiJ_G0030351	-	77	85.321	ENSPREG00000006176	sympk	90	75.068	Poecilia_reticulata
MGP_SPRETEiJ_G0030351	-	87	97.032	ENSPPYG00000010135	SYMPK	99	97.032	Pongo_abelii
MGP_SPRETEiJ_G0030351	-	94	89.880	ENSPCAG00000005182	SYMPK	94	89.880	Procavia_capensis
MGP_SPRETEiJ_G0030351	-	100	93.696	ENSPCOG00000023740	SYMPK	100	98.400	Propithecus_coquereli
MGP_SPRETEiJ_G0030351	-	97	92.869	ENSPVAG00000001355	SYMPK	100	92.869	Pteropus_vampyrus
MGP_SPRETEiJ_G0030351	-	77	86.239	ENSPNYG00000011455	sympk	90	74.396	Pundamilia_nyererei
MGP_SPRETEiJ_G0030351	-	90	73.190	ENSPNAG00000016505	sympk	89	75.179	Pygocentrus_nattereri
MGP_SPRETEiJ_G0030351	-	100	97.741	ENSRNOG00000014353	Sympk	100	97.741	Rattus_norvegicus
MGP_SPRETEiJ_G0030351	-	100	92.691	ENSRBIG00000040963	SYMPK	100	98.400	Rhinopithecus_bieti
MGP_SPRETEiJ_G0030351	-	100	93.536	ENSRROG00000024834	SYMPK	97	97.665	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0030351	-	100	93.833	ENSSBOG00000034497	SYMPK	100	99.200	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0030351	-	91	89.854	ENSSHAG00000003139	SYMPK	99	89.854	Sarcophilus_harrisii
MGP_SPRETEiJ_G0030351	-	77	87.156	ENSSFOG00015006974	sympk	99	69.623	Scleropages_formosus
MGP_SPRETEiJ_G0030351	-	77	85.321	ENSSMAG00000018130	sympk	72	74.273	Scophthalmus_maximus
MGP_SPRETEiJ_G0030351	-	93	70.608	ENSSDUG00000007092	sympk	91	74.101	Seriola_dumerili
MGP_SPRETEiJ_G0030351	-	93	70.451	ENSSLDG00000014774	sympk	96	71.757	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0030351	-	77	99.083	ENSSARG00000004274	-	66	100.000	Sorex_araneus
MGP_SPRETEiJ_G0030351	-	97	82.006	ENSSPUG00000002789	SYMPK	96	81.646	Sphenodon_punctatus
MGP_SPRETEiJ_G0030351	-	77	87.156	ENSSPAG00000000854	sympk	90	74.368	Stegastes_partitus
MGP_SPRETEiJ_G0030351	-	100	93.604	ENSSSCG00000003093	SYMPK	100	93.604	Sus_scrofa
MGP_SPRETEiJ_G0030351	-	87	74.038	ENSTRUG00000010202	sympk	91	74.167	Takifugu_rubripes
MGP_SPRETEiJ_G0030351	-	77	83.486	ENSTNIG00000017855	sympk	98	73.333	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0030351	-	87	94.156	ENSTBEG00000000454	SYMPK	88	94.156	Tupaia_belangeri
MGP_SPRETEiJ_G0030351	-	100	84.903	ENSTTRG00000014311	SYMPK	100	84.981	Tursiops_truncatus
MGP_SPRETEiJ_G0030351	-	100	91.270	ENSUAMG00000022272	SYMPK	95	96.912	Ursus_americanus
MGP_SPRETEiJ_G0030351	-	100	93.375	ENSUMAG00000023698	SYMPK	100	93.375	Ursus_maritimus
MGP_SPRETEiJ_G0030351	-	89	96.394	ENSVVUG00000003024	SYMPK	99	96.394	Vulpes_vulpes
MGP_SPRETEiJ_G0030351	-	91	71.945	ENSXETG00000024453	sympk	98	69.901	Xenopus_tropicalis
MGP_SPRETEiJ_G0030351	-	78	84.685	ENSXCOG00000015368	sympk	100	74.191	Xiphophorus_couchianus
MGP_SPRETEiJ_G0030351	-	77	85.321	ENSXMAG00000005737	sympk	90	74.909	Xiphophorus_maculatus