EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0030420 (Gene tree)
Gene ID: -
Gene Symbol: Zfp108
Alias: -
Full Name: zinc finger protein 108
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 9657 bases
Position: chr7:13584836-13594492
Accession: 1891198
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0081200	zf-C2H2	PF00096.26	2e-66	1	12
MGP_SPRETEiJ_P0081200	zf-C2H2	PF00096.26	2e-66	2	12
MGP_SPRETEiJ_P0081200	zf-C2H2	PF00096.26	2e-66	3	12
MGP_SPRETEiJ_P0081200	zf-C2H2	PF00096.26	2e-66	4	12
MGP_SPRETEiJ_P0081200	zf-C2H2	PF00096.26	2e-66	5	12
MGP_SPRETEiJ_P0081200	zf-C2H2	PF00096.26	2e-66	6	12
MGP_SPRETEiJ_P0081200	zf-C2H2	PF00096.26	2e-66	7	12
MGP_SPRETEiJ_P0081200	zf-C2H2	PF00096.26	2e-66	8	12
MGP_SPRETEiJ_P0081200	zf-C2H2	PF00096.26	2e-66	9	12
MGP_SPRETEiJ_P0081200	zf-C2H2	PF00096.26	2e-66	10	12
MGP_SPRETEiJ_P0081200	zf-C2H2	PF00096.26	2e-66	11	12
MGP_SPRETEiJ_P0081200	zf-C2H2	PF00096.26	2e-66	12	12
MGP_SPRETEiJ_P0081198	zf-C2H2	PF00096.26	2.1e-66	1	12
MGP_SPRETEiJ_P0081198	zf-C2H2	PF00096.26	2.1e-66	2	12
MGP_SPRETEiJ_P0081198	zf-C2H2	PF00096.26	2.1e-66	3	12
MGP_SPRETEiJ_P0081198	zf-C2H2	PF00096.26	2.1e-66	4	12
MGP_SPRETEiJ_P0081198	zf-C2H2	PF00096.26	2.1e-66	5	12
MGP_SPRETEiJ_P0081198	zf-C2H2	PF00096.26	2.1e-66	6	12
MGP_SPRETEiJ_P0081198	zf-C2H2	PF00096.26	2.1e-66	7	12
MGP_SPRETEiJ_P0081198	zf-C2H2	PF00096.26	2.1e-66	8	12
MGP_SPRETEiJ_P0081198	zf-C2H2	PF00096.26	2.1e-66	9	12
MGP_SPRETEiJ_P0081198	zf-C2H2	PF00096.26	2.1e-66	10	12
MGP_SPRETEiJ_P0081198	zf-C2H2	PF00096.26	2.1e-66	11	12
MGP_SPRETEiJ_P0081198	zf-C2H2	PF00096.26	2.1e-66	12	12
MGP_SPRETEiJ_P0081199	zf-C2H2	PF00096.26	2.1e-66	1	12
MGP_SPRETEiJ_P0081199	zf-C2H2	PF00096.26	2.1e-66	2	12
MGP_SPRETEiJ_P0081199	zf-C2H2	PF00096.26	2.1e-66	3	12
MGP_SPRETEiJ_P0081199	zf-C2H2	PF00096.26	2.1e-66	4	12
MGP_SPRETEiJ_P0081199	zf-C2H2	PF00096.26	2.1e-66	5	12
MGP_SPRETEiJ_P0081199	zf-C2H2	PF00096.26	2.1e-66	6	12
MGP_SPRETEiJ_P0081199	zf-C2H2	PF00096.26	2.1e-66	7	12
MGP_SPRETEiJ_P0081199	zf-C2H2	PF00096.26	2.1e-66	8	12
MGP_SPRETEiJ_P0081199	zf-C2H2	PF00096.26	2.1e-66	9	12
MGP_SPRETEiJ_P0081199	zf-C2H2	PF00096.26	2.1e-66	10	12
MGP_SPRETEiJ_P0081199	zf-C2H2	PF00096.26	2.1e-66	11	12
MGP_SPRETEiJ_P0081199	zf-C2H2	PF00096.26	2.1e-66	12	12
MGP_SPRETEiJ_P0081200	zf-met	PF12874.7	2.9e-10	1	1
MGP_SPRETEiJ_P0081198	zf-met	PF12874.7	3e-10	1	1
MGP_SPRETEiJ_P0081199	zf-met	PF12874.7	3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0081198	-	2587	-	MGP_SPRETEiJ_P0081198	643 (aa)	-	-
MGP_SPRETEiJ_T0081199	-	2694	-	MGP_SPRETEiJ_P0081199	643 (aa)	-	-
MGP_SPRETEiJ_T0081200	-	2362	-	MGP_SPRETEiJ_P0081200	642 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0030420's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0030420's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0030420	Zfp108	77	55.814	MGP_SPRETEiJ_G0019543	-	78	55.814
MGP_SPRETEiJ_G0030420	Zfp108	99	49.421	MGP_SPRETEiJ_G0032697	Zfp1	100	49.421
MGP_SPRETEiJ_G0030420	Zfp108	99	50.000	MGP_SPRETEiJ_G0030713	Zfp715	66	59.524
MGP_SPRETEiJ_G0030420	Zfp108	66	43.119	MGP_SPRETEiJ_G0023360	Zfp236	68	46.429
MGP_SPRETEiJ_G0030420	Zfp108	67	53.448	MGP_SPRETEiJ_G0029809	Zfp637	74	50.521
MGP_SPRETEiJ_G0030420	Zfp108	66	43.544	MGP_SPRETEiJ_G0027723	Zbtb17	58	43.413
MGP_SPRETEiJ_G0030420	Zfp108	99	53.097	MGP_SPRETEiJ_G0020852	Zfp251	92	53.097
MGP_SPRETEiJ_G0030420	Zfp108	60	48.077	MGP_SPRETEiJ_G0028173	Zbtb49	59	49.296
MGP_SPRETEiJ_G0030420	Zfp108	69	46.781	MGP_SPRETEiJ_G0017233	Zfp672	98	50.000
MGP_SPRETEiJ_G0030420	Zfp108	99	41.751	MGP_SPRETEiJ_G0019544	Zfp759	87	48.257
MGP_SPRETEiJ_G0030420	Zfp108	66	46.154	MGP_SPRETEiJ_G0030188	Zfp628	62	49.102
MGP_SPRETEiJ_G0030420	Zfp108	68	38.983	MGP_SPRETEiJ_G0022057	Zscan10	78	38.983
MGP_SPRETEiJ_G0030420	Zfp108	99	43.823	MGP_SPRETEiJ_G0022052	Zfp945	99	45.652
MGP_SPRETEiJ_G0030420	Zfp108	99	47.876	MGP_SPRETEiJ_G0025181	Zfp661	97	47.876
MGP_SPRETEiJ_G0030420	Zfp108	66	40.000	MGP_SPRETEiJ_G0030196	-	81	32.731
MGP_SPRETEiJ_G0030420	Zfp108	69	53.737	MGP_SPRETEiJ_G0031612	Zfp768	51	53.521
MGP_SPRETEiJ_G0030420	Zfp108	72	46.341	MGP_SPRETEiJ_G0031613	-	90	44.981
MGP_SPRETEiJ_G0030420	Zfp108	72	46.341	MGP_SPRETEiJ_G0031614	-	90	44.981
MGP_SPRETEiJ_G0030420	Zfp108	66	52.000	MGP_SPRETEiJ_G0019129	Zkscan4	54	52.000
MGP_SPRETEiJ_G0030420	Zfp108	66	40.816	MGP_SPRETEiJ_G0029467	Prdm5	93	40.816
MGP_SPRETEiJ_G0030420	Zfp108	78	42.857	MGP_SPRETEiJ_G0030453	Zfp574	87	42.857
MGP_SPRETEiJ_G0030420	Zfp108	79	48.118	MGP_SPRETEiJ_G0030525	-	85	48.118
MGP_SPRETEiJ_G0030420	Zfp108	79	41.595	MGP_SPRETEiJ_G0030526	-	88	42.296
MGP_SPRETEiJ_G0030420	Zfp108	77	53.659	MGP_SPRETEiJ_G0017272	Zfp867	91	53.659
MGP_SPRETEiJ_G0030420	Zfp108	56	38.418	MGP_SPRETEiJ_G0015474	Zbtb41	52	34.756
MGP_SPRETEiJ_G0030420	Zfp108	60	38.528	MGP_SPRETEiJ_G0025644	Zfp64	77	34.783
MGP_SPRETEiJ_G0030420	Zfp108	99	54.902	MGP_SPRETEiJ_G0030709	-	100	54.902
MGP_SPRETEiJ_G0030420	Zfp108	79	56.818	MGP_SPRETEiJ_G0019560	Zfp748	97	56.818
MGP_SPRETEiJ_G0030420	Zfp108	75	36.919	MGP_SPRETEiJ_G0032539	Zfp319	97	36.919
MGP_SPRETEiJ_G0030420	Zfp108	75	35.610	MGP_SPRETEiJ_G0029346	Repin1	94	33.810
MGP_SPRETEiJ_G0030420	Zfp108	99	58.418	MGP_SPRETEiJ_G0030415	Zfp112	99	58.418
MGP_SPRETEiJ_G0030420	Zfp108	91	65.366	MGP_SPRETEiJ_G0030417	Zfp114	99	65.049
MGP_SPRETEiJ_G0030420	Zfp108	99	75.559	MGP_SPRETEiJ_G0030416	Zfp235	100	63.556
MGP_SPRETEiJ_G0030420	Zfp108	79	55.556	MGP_SPRETEiJ_G0030586	Zfp420	99	55.556
MGP_SPRETEiJ_G0030420	Zfp108	73	38.889	MGP_SPRETEiJ_G0030524	Zfp59	99	38.889
MGP_SPRETEiJ_G0030420	Zfp108	71	86.158	MGP_SPRETEiJ_G0030421	-	99	86.158
MGP_SPRETEiJ_G0030420	Zfp108	99	50.809	MGP_SPRETEiJ_G0030422	Zfp61	99	50.809
MGP_SPRETEiJ_G0030420	Zfp108	99	58.333	MGP_SPRETEiJ_G0030423	Zfp94	97	58.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0030420	Zfp108	100	48.098	ENSG00000159915	ZNF233	99	49.616	Homo_sapiens
MGP_SPRETEiJ_G0030420	Zfp108	97	44.327	ENSAMEG00000006122	ZNF233	99	50.923	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0030420	Zfp108	100	44.053	ENSCATG00000015076	ZNF233	99	44.053	Cercocebus_atys
MGP_SPRETEiJ_G0030420	Zfp108	99	51.825	ENSCSAG00000003326	ZNF233	99	51.825	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0030420	Zfp108	99	53.488	ENSCHOG00000010443	ZNF233	99	53.488	Choloepus_hoffmanni
MGP_SPRETEiJ_G0030420	Zfp108	100	50.260	ENSCANG00000032081	ZNF233	99	50.518	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0030420	Zfp108	99	58.159	ENSCGRG00000015809	-	99	58.159	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0030420	Zfp108	96	58.106	ENSCGRG00000015629	-	92	58.106	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0030420	Zfp108	99	46.396	ENSDNOG00000038729	ZNF233	99	52.260	Dasypus_novemcinctus
MGP_SPRETEiJ_G0030420	Zfp108	58	54.762	ENSFALG00000009044	-	100	54.762	Ficedula_albicollis
MGP_SPRETEiJ_G0030420	Zfp108	93	50.916	ENSGGOG00000013940	ZNF233	96	50.916	Gorilla_gorilla
MGP_SPRETEiJ_G0030420	Zfp108	100	51.672	ENSMFAG00000039215	ZNF233	99	45.373	Macaca_fascicularis
MGP_SPRETEiJ_G0030420	Zfp108	100	51.368	ENSMMUG00000012797	ZNF233	99	52.399	Macaca_mulatta
MGP_SPRETEiJ_G0030420	Zfp108	66	53.153	ENSMZEG00005024630	-	82	53.153	Maylandia_zebra
MGP_SPRETEiJ_G0030420	Zfp108	100	55.593	ENSMICG00000016725	ZNF233	98	55.593	Microcebus_murinus
MGP_SPRETEiJ_G0030420	Zfp108	99	76.453	MGP_CAROLIEiJ_G0029322	Zfp235	100	64.444	Mus_caroli
MGP_SPRETEiJ_G0030420	Zfp108	100	95.801	MGP_CAROLIEiJ_G0029326	Zfp108	100	95.801	Mus_caroli
MGP_SPRETEiJ_G0030420	Zfp108	93	79.139	MGP_CAROLIEiJ_G0029327	Zfp93	99	79.270	Mus_caroli
MGP_SPRETEiJ_G0030420	Zfp108	100	96.729	ENSMUSG00000030486	Zfp108	100	96.729	Mus_musculus
MGP_SPRETEiJ_G0030420	Zfp108	99	75.708	ENSMUSG00000047603	Zfp235	100	63.704	Mus_musculus
MGP_SPRETEiJ_G0030420	Zfp108	99	69.322	ENSMUSG00000068962	Zfp114	99	69.322	Mus_musculus
MGP_SPRETEiJ_G0030420	Zfp108	99	81.903	ENSMUSG00000055305	Zfp93	100	81.705	Mus_musculus
MGP_SPRETEiJ_G0030420	Zfp108	99	76.488	MGP_PahariEiJ_G0021173	Zfp235	100	64.444	Mus_pahari
MGP_SPRETEiJ_G0030420	Zfp108	93	79.097	MGP_PahariEiJ_G0021178	Zfp93	99	84.487	Mus_pahari
MGP_SPRETEiJ_G0030420	Zfp108	100	90.654	MGP_PahariEiJ_G0021177	Zfp108	100	90.513	Mus_pahari
MGP_SPRETEiJ_G0030420	Zfp108	65	54.018	ENSORLG00015017539	-	69	51.754	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0030420	Zfp108	99	53.221	ENSOGAG00000001912	ZNF233	100	47.478	Otolemur_garnettii
MGP_SPRETEiJ_G0030420	Zfp108	100	48.913	ENSPPAG00000030145	ZNF233	99	46.891	Pan_paniscus
MGP_SPRETEiJ_G0030420	Zfp108	100	49.185	ENSPTRG00000011111	ZNF233	99	46.114	Pan_troglodytes
MGP_SPRETEiJ_G0030420	Zfp108	100	51.724	ENSPANG00000010670	ZNF233	99	52.768	Papio_anubis
MGP_SPRETEiJ_G0030420	Zfp108	99	74.030	ENSPEMG00000018022	-	100	61.869	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0030420	Zfp108	100	51.714	ENSPPYG00000010085	ZNF233	97	51.714	Pongo_abelii
MGP_SPRETEiJ_G0030420	Zfp108	99	45.333	ENSPCOG00000015292	ZNF233	99	50.420	Propithecus_coquereli
MGP_SPRETEiJ_G0030420	Zfp108	77	68.889	ENSPVAG00000004388	ZNF233	65	68.889	Pteropus_vampyrus
MGP_SPRETEiJ_G0030420	Zfp108	100	52.190	ENSRBIG00000035218	ZNF233	99	52.190	Rhinopithecus_bieti
MGP_SPRETEiJ_G0030420	Zfp108	100	48.641	ENSRROG00000030619	ZNF233	99	53.506	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0030420	Zfp108	99	46.629	ENSTTRG00000011818	ZNF233	99	56.148	Tursiops_truncatus
MGP_SPRETEiJ_G0030420	Zfp108	93	55.116	ENSUMAG00000023065	ZNF233	96	55.116	Ursus_maritimus
MGP_SPRETEiJ_G0030420	Zfp108	99	64.151	ENSVPAG00000007465	ZNF233	100	64.151	Vicugna_pacos
MGP_SPRETEiJ_G0030420	Zfp108	56	50.273	ENSXMAG00000027300	-	73	47.879	Xiphophorus_maculatus