EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0030421 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 7342 bases
Position: chr7:13602507-13609848
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0081201	zf-C2H2	PF00096.26	1.4e-69	1	12
MGP_SPRETEiJ_P0081201	zf-C2H2	PF00096.26	1.4e-69	2	12
MGP_SPRETEiJ_P0081201	zf-C2H2	PF00096.26	1.4e-69	3	12
MGP_SPRETEiJ_P0081201	zf-C2H2	PF00096.26	1.4e-69	4	12
MGP_SPRETEiJ_P0081201	zf-C2H2	PF00096.26	1.4e-69	5	12
MGP_SPRETEiJ_P0081201	zf-C2H2	PF00096.26	1.4e-69	6	12
MGP_SPRETEiJ_P0081201	zf-C2H2	PF00096.26	1.4e-69	7	12
MGP_SPRETEiJ_P0081201	zf-C2H2	PF00096.26	1.4e-69	8	12
MGP_SPRETEiJ_P0081201	zf-C2H2	PF00096.26	1.4e-69	9	12
MGP_SPRETEiJ_P0081201	zf-C2H2	PF00096.26	1.4e-69	10	12
MGP_SPRETEiJ_P0081201	zf-C2H2	PF00096.26	1.4e-69	11	12
MGP_SPRETEiJ_P0081201	zf-C2H2	PF00096.26	1.4e-69	12	12
MGP_SPRETEiJ_P0081201	zf-met	PF12874.7	6.1e-16	1	3
MGP_SPRETEiJ_P0081201	zf-met	PF12874.7	6.1e-16	2	3
MGP_SPRETEiJ_P0081201	zf-met	PF12874.7	6.1e-16	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0081201	-	2813	-	MGP_SPRETEiJ_P0081201	423 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0030421's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0030421's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0030421	-	98	43.506	MGP_SPRETEiJ_G0030453	Zfp574	74	43.506
MGP_SPRETEiJ_G0030421	-	99	49.421	MGP_SPRETEiJ_G0032697	Zfp1	80	49.421
MGP_SPRETEiJ_G0030421	-	99	52.861	MGP_SPRETEiJ_G0019560	Zfp748	95	52.861
MGP_SPRETEiJ_G0030421	-	99	51.462	MGP_SPRETEiJ_G0017272	Zfp867	89	51.462
MGP_SPRETEiJ_G0030421	-	99	86.158	MGP_SPRETEiJ_G0030420	Zfp108	71	86.158
MGP_SPRETEiJ_G0030421	-	99	58.261	MGP_SPRETEiJ_G0030423	Zfp94	74	58.261
MGP_SPRETEiJ_G0030421	-	99	50.831	MGP_SPRETEiJ_G0030422	Zfp61	56	50.831
MGP_SPRETEiJ_G0030421	-	99	43.068	MGP_SPRETEiJ_G0027723	Zbtb17	56	43.506
MGP_SPRETEiJ_G0030421	-	92	40.969	MGP_SPRETEiJ_G0030196	-	79	40.969
MGP_SPRETEiJ_G0030421	-	99	53.543	MGP_SPRETEiJ_G0025181	Zfp661	66	53.543
MGP_SPRETEiJ_G0030421	-	99	60.317	MGP_SPRETEiJ_G0030415	Zfp112	67	60.317
MGP_SPRETEiJ_G0030421	-	99	77.629	MGP_SPRETEiJ_G0030416	Zfp235	73	76.286
MGP_SPRETEiJ_G0030421	-	99	67.352	MGP_SPRETEiJ_G0030417	Zfp114	63	66.837
MGP_SPRETEiJ_G0030421	-	97	55.172	MGP_SPRETEiJ_G0029809	Zfp637	79	53.125
MGP_SPRETEiJ_G0030421	-	99	46.835	MGP_SPRETEiJ_G0030713	Zfp715	67	52.861
MGP_SPRETEiJ_G0030421	-	99	44.444	MGP_SPRETEiJ_G0023360	Zfp236	80	44.444
MGP_SPRETEiJ_G0030421	-	87	57.895	MGP_SPRETEiJ_G0020852	Zfp251	65	57.895
MGP_SPRETEiJ_G0030421	-	90	41.905	MGP_SPRETEiJ_G0015474	Zbtb41	52	41.905
MGP_SPRETEiJ_G0030421	-	99	49.839	MGP_SPRETEiJ_G0019544	Zfp759	91	49.839
MGP_SPRETEiJ_G0030421	-	99	56.944	MGP_SPRETEiJ_G0019543	-	63	56.944
MGP_SPRETEiJ_G0030421	-	99	55.556	MGP_SPRETEiJ_G0030709	-	86	55.294
MGP_SPRETEiJ_G0030421	-	99	39.691	MGP_SPRETEiJ_G0030188	Zfp628	60	39.691
MGP_SPRETEiJ_G0030421	-	99	38.411	MGP_SPRETEiJ_G0029467	Prdm5	93	39.073
MGP_SPRETEiJ_G0030421	-	99	37.736	MGP_SPRETEiJ_G0029346	Repin1	92	37.736
MGP_SPRETEiJ_G0030421	-	99	57.105	MGP_SPRETEiJ_G0030586	Zfp420	98	57.105
MGP_SPRETEiJ_G0030421	-	99	47.321	MGP_SPRETEiJ_G0025644	Zfp64	77	36.101
MGP_SPRETEiJ_G0030421	-	92	35.465	MGP_SPRETEiJ_G0030197	-	66	31.017
MGP_SPRETEiJ_G0030421	-	99	46.748	MGP_SPRETEiJ_G0031613	-	85	46.748
MGP_SPRETEiJ_G0030421	-	99	53.737	MGP_SPRETEiJ_G0031612	Zfp768	51	53.333
MGP_SPRETEiJ_G0030421	-	99	46.748	MGP_SPRETEiJ_G0031614	-	85	46.748
MGP_SPRETEiJ_G0030421	-	89	48.969	MGP_SPRETEiJ_G0028173	Zbtb49	68	50.704
MGP_SPRETEiJ_G0030421	-	99	49.457	MGP_SPRETEiJ_G0030525	-	84	49.457
MGP_SPRETEiJ_G0030421	-	91	45.652	MGP_SPRETEiJ_G0017233	Zfp672	98	47.619
MGP_SPRETEiJ_G0030421	-	99	42.671	MGP_SPRETEiJ_G0022057	Zscan10	77	42.671
MGP_SPRETEiJ_G0030421	-	99	50.556	MGP_SPRETEiJ_G0022052	Zfp945	77	50.556
MGP_SPRETEiJ_G0030421	-	99	51.982	MGP_SPRETEiJ_G0019129	Zkscan4	54	52.632
MGP_SPRETEiJ_G0030421	-	99	41.144	MGP_SPRETEiJ_G0032539	Zfp319	92	38.128
MGP_SPRETEiJ_G0030421	-	99	46.133	MGP_SPRETEiJ_G0030524	Zfp59	81	46.594
MGP_SPRETEiJ_G0030421	-	99	46.719	MGP_SPRETEiJ_G0030526	-	87	46.719

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0030421	-	99	53.202	ENSG00000159915	ZNF233	69	53.041	Homo_sapiens
MGP_SPRETEiJ_G0030421	-	99	56.981	ENSAMEG00000006122	ZNF233	67	57.357	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0030421	-	99	59.542	ENSCATG00000015076	ZNF233	63	59.542	Cercocebus_atys
MGP_SPRETEiJ_G0030421	-	99	56.701	ENSCSAG00000003326	ZNF233	69	55.419	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0030421	-	99	53.553	ENSCHOG00000010443	ZNF233	66	54.278	Choloepus_hoffmanni
MGP_SPRETEiJ_G0030421	-	99	56.308	ENSCANG00000032081	ZNF233	69	56.308	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0030421	-	99	65.155	ENSCGRG00000015629	-	71	65.155	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0030421	-	99	57.635	ENSDNOG00000038729	ZNF233	70	57.635	Dasypus_novemcinctus
MGP_SPRETEiJ_G0030421	-	98	50.000	ENSFALG00000009044	-	100	54.762	Ficedula_albicollis
MGP_SPRETEiJ_G0030421	-	99	54.926	ENSGGOG00000013940	ZNF233	77	54.926	Gorilla_gorilla
MGP_SPRETEiJ_G0030421	-	96	63.396	ENSMFAG00000039215	ZNF233	67	63.396	Macaca_fascicularis
MGP_SPRETEiJ_G0030421	-	96	63.396	ENSMMUG00000012797	ZNF233	67	63.396	Macaca_mulatta
MGP_SPRETEiJ_G0030421	-	99	54.054	ENSMZEG00005024630	-	89	54.054	Maylandia_zebra
MGP_SPRETEiJ_G0030421	-	99	56.314	ENSMICG00000016725	ZNF233	73	56.845	Microcebus_murinus
MGP_SPRETEiJ_G0030421	-	99	95.000	MGP_CAROLIEiJ_G0029327	Zfp93	75	95.000	Mus_caroli
MGP_SPRETEiJ_G0030421	-	99	83.532	MGP_CAROLIEiJ_G0029326	Zfp108	70	83.532	Mus_caroli
MGP_SPRETEiJ_G0030421	-	99	78.076	MGP_CAROLIEiJ_G0029322	Zfp235	70	76.734	Mus_caroli
MGP_SPRETEiJ_G0030421	-	99	69.780	ENSMUSG00000068962	Zfp114	67	69.780	Mus_musculus
MGP_SPRETEiJ_G0030421	-	99	85.442	ENSMUSG00000030486	Zfp108	71	85.442	Mus_musculus
MGP_SPRETEiJ_G0030421	-	99	97.619	ENSMUSG00000055305	Zfp93	70	97.619	Mus_musculus
MGP_SPRETEiJ_G0030421	-	99	77.629	ENSMUSG00000047603	Zfp235	68	76.286	Mus_musculus
MGP_SPRETEiJ_G0030421	-	99	78.300	MGP_PahariEiJ_G0021173	Zfp235	68	76.734	Mus_pahari
MGP_SPRETEiJ_G0030421	-	99	91.232	MGP_PahariEiJ_G0021178	Zfp93	99	91.232	Mus_pahari
MGP_SPRETEiJ_G0030421	-	99	82.816	MGP_PahariEiJ_G0021177	Zfp108	71	82.816	Mus_pahari
MGP_SPRETEiJ_G0030421	-	87	53.153	ENSORLG00015017539	-	68	53.153	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0030421	-	99	59.317	ENSOGAG00000001912	ZNF233	69	54.618	Otolemur_garnettii
MGP_SPRETEiJ_G0030421	-	99	54.660	ENSPPAG00000030145	ZNF233	69	55.056	Pan_paniscus
MGP_SPRETEiJ_G0030421	-	99	54.912	ENSPTRG00000011111	ZNF233	69	54.912	Pan_troglodytes
MGP_SPRETEiJ_G0030421	-	99	56.386	ENSPANG00000010670	ZNF233	67	57.455	Papio_anubis
MGP_SPRETEiJ_G0030421	-	99	77.852	ENSPEMG00000018022	-	69	76.286	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0030421	-	96	63.525	ENSPPYG00000010085	ZNF233	67	55.665	Pongo_abelii
MGP_SPRETEiJ_G0030421	-	99	57.736	ENSPCOG00000015292	ZNF233	71	57.500	Propithecus_coquereli
MGP_SPRETEiJ_G0030421	-	99	45.850	ENSPVAG00000004388	ZNF233	65	44.828	Pteropus_vampyrus
MGP_SPRETEiJ_G0030421	-	99	55.556	ENSRBIG00000035218	ZNF233	67	55.556	Rhinopithecus_bieti
MGP_SPRETEiJ_G0030421	-	99	56.075	ENSRROG00000030619	ZNF233	66	57.455	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0030421	-	99	51.980	ENSTTRG00000011818	ZNF233	68	56.839	Tursiops_truncatus
MGP_SPRETEiJ_G0030421	-	96	56.022	ENSUMAG00000023065	ZNF233	77	56.022	Ursus_maritimus
MGP_SPRETEiJ_G0030421	-	99	53.165	ENSVPAG00000007465	ZNF233	62	53.165	Vicugna_pacos
MGP_SPRETEiJ_G0030421	-	85	50.273	ENSXMAG00000027300	-	64	50.273	Xiphophorus_maculatus