EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0030686 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 72447 bases
Position: chr7:23864944-23937390
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0082364	TUDOR	PF00567.24	2e-35	1	2
MGP_SPRETEiJ_P0082364	TUDOR	PF00567.24	2e-35	2	2
MGP_SPRETEiJ_P0082363	TUDOR	PF00567.24	2.5e-35	1	2
MGP_SPRETEiJ_P0082363	TUDOR	PF00567.24	2.5e-35	2	2
MGP_SPRETEiJ_P0082366	TUDOR	PF00567.24	1.4e-24	1	1
MGP_SPRETEiJ_P0082368	TUDOR	PF00567.24	2.3e-12	1	1
MGP_SPRETEiJ_P0082365	TUDOR	PF00567.24	2.9e-12	1	1
MGP_SPRETEiJ_P0082364	DEAD	PF00270.29	6.7e-07	1	1
MGP_SPRETEiJ_P0082363	DEAD	PF00270.29	8.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0082366	-	1614	-	MGP_SPRETEiJ_P0082366	407 (aa)	-	-
MGP_SPRETEiJ_T0082367	-	543	-	MGP_SPRETEiJ_P0082367	127 (aa)	-	-
MGP_SPRETEiJ_T0082364	-	3341	-	MGP_SPRETEiJ_P0082364	1113 (aa)	-	-
MGP_SPRETEiJ_T0082365	-	1405	-	MGP_SPRETEiJ_P0082365	354 (aa)	-	-
MGP_SPRETEiJ_T0082363	-	3651	-	MGP_SPRETEiJ_P0082363	1216 (aa)	-	-
MGP_SPRETEiJ_T0082368	-	762	-	MGP_SPRETEiJ_P0082368	204 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0030686's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0030686's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0030686	-	84	43.094	ENSAPOG00000006421	tdrd12	90	43.094	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0030686	-	73	81.358	ENSAMEG00000015440	-	99	81.358	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0030686	-	88	45.024	ENSACIG00000021652	tdrd12	98	45.024	Amphilophus_citrinellus
MGP_SPRETEiJ_G0030686	-	77	46.927	ENSAOCG00000016463	tdrd12	74	46.927	Amphiprion_ocellaris
MGP_SPRETEiJ_G0030686	-	80	45.175	ENSAPEG00000015105	tdrd12	86	45.175	Amphiprion_percula
MGP_SPRETEiJ_G0030686	-	84	43.604	ENSATEG00000011608	tdrd12	92	43.604	Anabas_testudineus
MGP_SPRETEiJ_G0030686	-	94	57.513	ENSAPLG00000011417	-	92	60.000	Anas_platyrhynchos
MGP_SPRETEiJ_G0030686	-	66	55.722	ENSACAG00000029615	-	87	51.445	Anolis_carolinensis
MGP_SPRETEiJ_G0030686	-	100	75.578	ENSANAG00000023166	-	99	75.578	Aotus_nancymaae
MGP_SPRETEiJ_G0030686	-	80	47.145	ENSAMXG00000013811	tdrd12	88	47.145	Astyanax_mexicanus
MGP_SPRETEiJ_G0030686	-	90	83.152	ENSBTAG00000019266	TDRD12	99	75.000	Bos_taurus
MGP_SPRETEiJ_G0030686	-	100	75.942	ENSCJAG00000000763	-	99	75.942	Callithrix_jacchus
MGP_SPRETEiJ_G0030686	-	97	83.756	ENSCAFG00000007505	TDRD12	99	76.292	Canis_familiaris
MGP_SPRETEiJ_G0030686	-	97	83.756	ENSCAFG00020019790	-	94	79.329	Canis_lupus_dingo
MGP_SPRETEiJ_G0030686	-	99	75.645	ENSTSYG00000012034	-	99	75.645	Carlito_syrichta
MGP_SPRETEiJ_G0030686	-	99	80.597	ENSCPOG00000002876	-	100	74.774	Cavia_porcellus
MGP_SPRETEiJ_G0030686	-	100	72.089	ENSCCAG00000037592	-	99	72.089	Cebus_capucinus
MGP_SPRETEiJ_G0030686	-	99	70.776	ENSCATG00000038627	-	99	70.776	Cercocebus_atys
MGP_SPRETEiJ_G0030686	-	99	77.324	ENSCLAG00000012138	-	94	74.131	Chinchilla_lanigera
MGP_SPRETEiJ_G0030686	-	97	78.173	ENSCSAG00000004794	-	98	75.880	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0030686	-	68	91.346	ENSCHOG00000009768	-	53	91.346	Choloepus_hoffmanni
MGP_SPRETEiJ_G0030686	-	97	69.347	ENSCPBG00000000147	-	94	64.583	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0030686	-	97	77.157	ENSCANG00000040785	-	99	73.545	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0030686	-	98	96.482	ENSCGRG00001021407	-	99	91.133	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0030686	-	94	95.833	ENSCGRG00000007286	-	100	88.650	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0030686	-	84	41.667	ENSCSEG00000001744	-	74	41.667	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0030686	-	61	42.711	ENSCVAG00000004277	tdrd12	96	38.560	Cyprinodon_variegatus
MGP_SPRETEiJ_G0030686	-	85	45.884	ENSDARG00000075217	tdrd12	80	44.077	Danio_rerio
MGP_SPRETEiJ_G0030686	-	97	82.741	ENSDNOG00000017244	-	93	76.471	Dasypus_novemcinctus
MGP_SPRETEiJ_G0030686	-	97	81.218	ENSDORG00000012134	-	99	73.934	Dipodomys_ordii
MGP_SPRETEiJ_G0030686	-	71	75.342	ENSETEG00000015088	-	79	75.342	Echinops_telfairi
MGP_SPRETEiJ_G0030686	-	94	84.896	ENSEASG00005021053	-	99	73.607	Equus_asinus_asinus
MGP_SPRETEiJ_G0030686	-	88	86.735	ENSEEUG00000008457	-	92	86.735	Erinaceus_europaeus
MGP_SPRETEiJ_G0030686	-	99	39.485	ENSELUG00000017494	tdrd12	91	43.200	Esox_lucius
MGP_SPRETEiJ_G0030686	-	97	49.246	ENSFALG00000000259	-	92	43.314	Ficedula_albicollis
MGP_SPRETEiJ_G0030686	-	99	78.607	ENSFDAG00000014797	-	100	74.672	Fukomys_damarensis
MGP_SPRETEiJ_G0030686	-	73	47.973	ENSFHEG00000002884	-	65	44.928	Fundulus_heteroclitus
MGP_SPRETEiJ_G0030686	-	94	55.897	ENSGALG00000004704	-	96	55.686	Gallus_gallus
MGP_SPRETEiJ_G0030686	-	89	42.723	ENSGAFG00000003729	tdrd12	82	42.723	Gambusia_affinis
MGP_SPRETEiJ_G0030686	-	97	70.352	ENSGAGG00000000247	-	92	69.349	Gopherus_agassizii
MGP_SPRETEiJ_G0030686	-	100	76.113	ENSGGOG00000011938	-	99	76.113	Gorilla_gorilla
MGP_SPRETEiJ_G0030686	-	81	45.748	ENSHBUG00000020426	tdrd12	90	45.748	Haplochromis_burtoni
MGP_SPRETEiJ_G0030686	-	99	82.090	ENSHGLG00000015608	-	100	76.961	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0030686	-	95	80.612	ENSHGLG00100008227	-	99	77.624	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0030686	-	51	38.095	ENSHCOG00000016160	-	75	47.183	Hippocampus_comes
MGP_SPRETEiJ_G0030686	-	85	42.584	ENSIPUG00000016825	tdrd12	79	42.584	Ictalurus_punctatus
MGP_SPRETEiJ_G0030686	-	100	88.235	ENSSTOG00000013638	-	100	81.127	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0030686	-	65	44.037	ENSKMAG00000008031	tdrd12	83	44.037	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0030686	-	90	42.391	ENSLBEG00000005601	tdrd12	91	43.084	Labrus_bergylta
MGP_SPRETEiJ_G0030686	-	97	55.340	ENSLACG00000010650	-	99	50.270	Latimeria_chalumnae
MGP_SPRETEiJ_G0030686	-	88	47.895	ENSLOCG00000001690	tdrd12	74	50.000	Lepisosteus_oculatus
MGP_SPRETEiJ_G0030686	-	94	82.723	ENSLAFG00000008698	-	99	79.548	Loxodonta_africana
MGP_SPRETEiJ_G0030686	-	100	76.370	ENSMFAG00000044756	-	99	76.370	Macaca_fascicularis
MGP_SPRETEiJ_G0030686	-	100	76.541	ENSMMUG00000015608	-	99	76.541	Macaca_mulatta
MGP_SPRETEiJ_G0030686	-	99	76.466	ENSMNEG00000043067	-	99	76.466	Macaca_nemestrina
MGP_SPRETEiJ_G0030686	-	97	78.680	ENSMLEG00000042036	-	99	70.725	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0030686	-	95	39.574	ENSMAMG00000013867	tdrd12	99	39.574	Mastacembelus_armatus
MGP_SPRETEiJ_G0030686	-	82	45.415	ENSMZEG00005024214	tdrd12	91	45.415	Maylandia_zebra
MGP_SPRETEiJ_G0030686	-	69	50.946	ENSMGAG00000005627	-	100	56.358	Meleagris_gallopavo
MGP_SPRETEiJ_G0030686	-	100	85.961	ENSMAUG00000013767	-	100	85.961	Mesocricetus_auratus
MGP_SPRETEiJ_G0030686	-	97	83.249	ENSMICG00000003623	-	99	78.341	Microcebus_murinus
MGP_SPRETEiJ_G0030686	-	97	92.893	ENSMOCG00000002366	-	99	89.430	Microtus_ochrogaster
MGP_SPRETEiJ_G0030686	-	84	42.838	ENSMMOG00000018662	tdrd12	91	43.094	Mola_mola
MGP_SPRETEiJ_G0030686	-	97	76.650	ENSMODG00000012286	-	93	67.071	Monodelphis_domestica
MGP_SPRETEiJ_G0030686	-	87	42.723	ENSMALG00000006918	tdrd12	82	42.723	Monopterus_albus
MGP_SPRETEiJ_G0030686	-	100	97.215	MGP_CAROLIEiJ_G0029587	-	100	97.215	Mus_caroli
MGP_SPRETEiJ_G0030686	-	100	96.078	MGP_PahariEiJ_G0012821	-	100	96.078	Mus_pahari
MGP_SPRETEiJ_G0030686	-	97	82.234	ENSMPUG00000007791	-	94	74.513	Mustela_putorius_furo
MGP_SPRETEiJ_G0030686	-	97	83.756	ENSMLUG00000010694	-	99	79.027	Myotis_lucifugus
MGP_SPRETEiJ_G0030686	-	100	88.235	ENSNGAG00000000793	-	99	82.193	Nannospalax_galili
MGP_SPRETEiJ_G0030686	-	64	42.877	ENSNBRG00000017878	-	95	44.282	Neolamprologus_brichardi
MGP_SPRETEiJ_G0030686	-	100	71.709	ENSNLEG00000007635	-	99	71.709	Nomascus_leucogenys
MGP_SPRETEiJ_G0030686	-	63	85.443	ENSMEUG00000014059	-	60	85.443	Notamacropus_eugenii
MGP_SPRETEiJ_G0030686	-	97	72.081	ENSOPRG00000015809	-	93	69.780	Ochotona_princeps
MGP_SPRETEiJ_G0030686	-	99	80.597	ENSODEG00000014443	-	100	73.803	Octodon_degus
MGP_SPRETEiJ_G0030686	-	96	41.446	ENSONIG00000010630	tdrd12	100	41.629	Oreochromis_niloticus
MGP_SPRETEiJ_G0030686	-	94	68.912	ENSOANG00000029442	-	99	60.993	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0030686	-	97	82.234	ENSOCUG00000016911	-	99	77.741	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0030686	-	79	41.898	ENSORLG00000027859	tdrd12	77	40.927	Oryzias_latipes
MGP_SPRETEiJ_G0030686	-	88	42.081	ENSORLG00015020835	tdrd12	79	42.081	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0030686	-	81	42.711	ENSOMEG00000021862	tdrd12	87	42.711	Oryzias_melastigma
MGP_SPRETEiJ_G0030686	-	97	81.218	ENSOGAG00000001571	-	99	80.689	Otolemur_garnettii
MGP_SPRETEiJ_G0030686	-	99	81.581	ENSOARG00000004254	-	94	78.779	Ovis_aries
MGP_SPRETEiJ_G0030686	-	97	78.173	ENSPPAG00000042284	-	99	73.345	Pan_paniscus
MGP_SPRETEiJ_G0030686	-	97	83.756	ENSPPRG00000002389	-	99	76.817	Panthera_pardus
MGP_SPRETEiJ_G0030686	-	100	73.031	ENSPTRG00000010795	TDRD12	99	73.054	Pan_troglodytes
MGP_SPRETEiJ_G0030686	-	89	87.624	ENSPANG00000001203	-	93	87.624	Papio_anubis
MGP_SPRETEiJ_G0030686	-	94	45.478	ENSPKIG00000006407	tdrd12	75	45.179	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0030686	-	94	69.948	ENSPSIG00000012970	-	100	67.500	Pelodiscus_sinensis
MGP_SPRETEiJ_G0030686	-	83	42.897	ENSPMGG00000022691	tdrd12	92	42.897	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0030686	-	98	95.980	ENSPEMG00000009233	-	100	90.707	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0030686	-	97	73.096	ENSPCIG00000020993	-	93	64.993	Phascolarctos_cinereus
MGP_SPRETEiJ_G0030686	-	84	43.624	ENSPFOG00000008184	tdrd12	70	43.168	Poecilia_formosa
MGP_SPRETEiJ_G0030686	-	74	43.709	ENSPMEG00000006420	tdrd12	92	45.276	Poecilia_mexicana
MGP_SPRETEiJ_G0030686	-	76	44.144	ENSPREG00000004916	tdrd12	77	44.144	Poecilia_reticulata
MGP_SPRETEiJ_G0030686	-	100	76.113	ENSPPYG00000009821	-	97	76.113	Pongo_abelii
MGP_SPRETEiJ_G0030686	-	93	78.947	ENSPCAG00000013510	-	85	69.767	Procavia_capensis
MGP_SPRETEiJ_G0030686	-	100	72.892	ENSPCOG00000023600	-	99	72.978	Propithecus_coquereli
MGP_SPRETEiJ_G0030686	-	90	92.268	ENSPVAG00000014599	-	90	92.268	Pteropus_vampyrus
MGP_SPRETEiJ_G0030686	-	81	45.748	ENSPNYG00000022866	tdrd12	88	45.748	Pundamilia_nyererei
MGP_SPRETEiJ_G0030686	-	80	45.376	ENSPNAG00000003413	tdrd12	85	45.376	Pygocentrus_nattereri
MGP_SPRETEiJ_G0030686	-	97	95.939	ENSRNOG00000012719	Tdrd12	94	92.830	Rattus_norvegicus
MGP_SPRETEiJ_G0030686	-	99	71.354	ENSRBIG00000019899	-	99	71.354	Rhinopithecus_bieti
MGP_SPRETEiJ_G0030686	-	97	79.188	ENSRROG00000036351	-	99	76.027	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0030686	-	97	79.188	ENSSBOG00000034916	-	99	75.514	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0030686	-	97	77.157	ENSSHAG00000002599	-	99	67.896	Sarcophilus_harrisii
MGP_SPRETEiJ_G0030686	-	79	46.212	ENSSFOG00015000297	tdrd12	81	45.909	Scleropages_formosus
MGP_SPRETEiJ_G0030686	-	96	40.000	ENSSMAG00000002870	tdrd12	99	40.000	Scophthalmus_maximus
MGP_SPRETEiJ_G0030686	-	80	45.322	ENSSDUG00000017304	tdrd12	88	45.322	Seriola_dumerili
MGP_SPRETEiJ_G0030686	-	80	44.444	ENSSLDG00000004415	tdrd12	88	44.444	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0030686	-	97	81.218	ENSSARG00000005357	-	99	75.207	Sorex_araneus
MGP_SPRETEiJ_G0030686	-	94	62.694	ENSSPUG00000013174	-	96	59.664	Sphenodon_punctatus
MGP_SPRETEiJ_G0030686	-	68	58.696	ENSSPAG00000005706	tdrd12	79	58.696	Stegastes_partitus
MGP_SPRETEiJ_G0030686	-	85	76.994	ENSSSCG00000002857	-	96	76.994	Sus_scrofa
MGP_SPRETEiJ_G0030686	-	59	50.302	ENSTGUG00000009121	-	100	51.737	Taeniopygia_guttata
MGP_SPRETEiJ_G0030686	-	83	39.340	ENSTRUG00000021888	tdrd12	95	39.340	Takifugu_rubripes
MGP_SPRETEiJ_G0030686	-	77	41.139	ENSTNIG00000000465	-	73	44.595	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0030686	-	75	85.575	ENSTBEG00000007609	-	76	85.575	Tupaia_belangeri
MGP_SPRETEiJ_G0030686	-	96	79.182	ENSTTRG00000012206	-	99	79.182	Tursiops_truncatus
MGP_SPRETEiJ_G0030686	-	99	77.388	ENSUAMG00000007298	-	96	77.388	Ursus_americanus
MGP_SPRETEiJ_G0030686	-	99	77.213	ENSUMAG00000014314	-	96	77.213	Ursus_maritimus
MGP_SPRETEiJ_G0030686	-	97	73.096	ENSVPAG00000012051	-	100	70.537	Vicugna_pacos
MGP_SPRETEiJ_G0030686	-	97	83.756	ENSVVUG00000016637	-	90	79.244	Vulpes_vulpes
MGP_SPRETEiJ_G0030686	-	70	43.387	ENSXETG00000031945	-	100	42.873	Xenopus_tropicalis
MGP_SPRETEiJ_G0030686	-	83	44.751	ENSXMAG00000020908	tdrd12	93	44.751	Xiphophorus_maculatus