EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0030699 (Gene tree)
Gene ID: -
Gene Symbol: Pop4
Alias: 1110023P21Rik|Rpp29
Full Name: processing of precursor 4%2C ribonuclease P/MRP family%2C (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 9235 bases
Position: chr7:26837016-26846250
Accession: 1913411
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0082437	UPF0086	PF01868.16	2.6e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0082437	-	2110	-	MGP_SPRETEiJ_P0082437	219 (aa)	-	-
MGP_SPRETEiJ_T0082438	-	881	-	MGP_SPRETEiJ_P0082438	81 (aa)	-	-
MGP_SPRETEiJ_T0082439	-	782	-	MGP_SPRETEiJ_P0082439	66 (aa)	-	UPI000719A32C
MGP_SPRETEiJ_T0082442	-	716	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0082441	-	581	-	MGP_SPRETEiJ_P0082441	81 (aa)	-	-
MGP_SPRETEiJ_T0082440	-	789	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0030699's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0030699's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0030699	Pop4	100	82.273	ENSG00000105171	POP4	100	90.625	Homo_sapiens
MGP_SPRETEiJ_G0030699	Pop4	99	79.817	ENSAMEG00000018329	-	99	80.275	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0030699	Pop4	97	71.963	ENSAMEG00000003172	-	97	71.963	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0030699	Pop4	93	60.976	ENSACIG00000008358	pop4	97	60.784	Amphilophus_citrinellus
MGP_SPRETEiJ_G0030699	Pop4	89	65.152	ENSAOCG00000010116	pop4	96	63.959	Amphiprion_ocellaris
MGP_SPRETEiJ_G0030699	Pop4	92	62.621	ENSAPEG00000002829	pop4	86	61.765	Amphiprion_percula
MGP_SPRETEiJ_G0030699	Pop4	92	63.902	ENSATEG00000013028	pop4	92	62.255	Anabas_testudineus
MGP_SPRETEiJ_G0030699	Pop4	89	71.574	ENSAPLG00000014051	POP4	98	71.287	Anas_platyrhynchos
MGP_SPRETEiJ_G0030699	Pop4	100	82.727	ENSANAG00000020295	POP4	100	82.727	Aotus_nancymaae
MGP_SPRETEiJ_G0030699	Pop4	92	62.069	ENSACLG00000000526	pop4	91	60.891	Astatotilapia_calliptera
MGP_SPRETEiJ_G0030699	Pop4	100	60.000	ENSAMXG00000002899	pop4	100	59.091	Astyanax_mexicanus
MGP_SPRETEiJ_G0030699	Pop4	100	84.545	ENSBTAG00000002223	POP4	100	84.545	Bos_taurus
MGP_SPRETEiJ_G0030699	Pop4	100	82.353	ENSCJAG00000046750	POP4	100	84.444	Callithrix_jacchus
MGP_SPRETEiJ_G0030699	Pop4	83	82.967	ENSCAFG00000007630	POP4	100	83.516	Canis_familiaris
MGP_SPRETEiJ_G0030699	Pop4	100	82.727	ENSCHIG00000016743	POP4	100	83.636	Capra_hircus
MGP_SPRETEiJ_G0030699	Pop4	100	82.273	ENSTSYG00000003488	POP4	100	82.727	Carlito_syrichta
MGP_SPRETEiJ_G0030699	Pop4	99	62.212	ENSCAPG00000011105	POP4	99	63.426	Cavia_aperea
MGP_SPRETEiJ_G0030699	Pop4	100	84.091	ENSCPOG00000002992	POP4	100	85.000	Cavia_porcellus
MGP_SPRETEiJ_G0030699	Pop4	100	81.818	ENSCCAG00000020285	-	100	82.727	Cebus_capucinus
MGP_SPRETEiJ_G0030699	Pop4	100	71.818	ENSCCAG00000034244	-	100	71.818	Cebus_capucinus
MGP_SPRETEiJ_G0030699	Pop4	100	84.091	ENSCATG00000036022	POP4	100	92.708	Cercocebus_atys
MGP_SPRETEiJ_G0030699	Pop4	100	83.182	ENSCLAG00000013162	POP4	100	84.091	Chinchilla_lanigera
MGP_SPRETEiJ_G0030699	Pop4	99	83.028	ENSCSAG00000004868	POP4	100	83.028	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0030699	Pop4	99	61.751	ENSCHOG00000002071	POP4	100	62.673	Choloepus_hoffmanni
MGP_SPRETEiJ_G0030699	Pop4	100	68.636	ENSCPBG00000016132	POP4	100	69.545	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0030699	Pop4	84	33.508	ENSCING00000023871	-	94	31.795	Ciona_intestinalis
MGP_SPRETEiJ_G0030699	Pop4	90	84.848	ENSCANG00000005924	POP4	98	84.848	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0030699	Pop4	100	91.781	ENSCGRG00001017185	Pop4	100	91.781	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0030699	Pop4	100	91.781	ENSCGRG00000008155	Pop4	100	91.781	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0030699	Pop4	92	55.122	ENSCSEG00000002946	pop4	92	54.412	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0030699	Pop4	89	46.970	ENSCVAG00000018602	POP4	85	43.878	Cyprinodon_variegatus
MGP_SPRETEiJ_G0030699	Pop4	88	65.285	ENSDARG00000101472	pop4	88	65.285	Danio_rerio
MGP_SPRETEiJ_G0030699	Pop4	100	81.364	ENSDNOG00000047663	POP4	88	82.273	Dasypus_novemcinctus
MGP_SPRETEiJ_G0030699	Pop4	78	82.456	ENSDORG00000008577	Pop4	99	83.041	Dipodomys_ordii
MGP_SPRETEiJ_G0030699	Pop4	68	35.484	FBgn0035831	CG8038	70	35.862	Drosophila_melanogaster
MGP_SPRETEiJ_G0030699	Pop4	98	68.056	ENSETEG00000003607	POP4	99	68.519	Echinops_telfairi
MGP_SPRETEiJ_G0030699	Pop4	91	49.537	ENSEBUG00000010447	pop4	83	48.598	Eptatretus_burgeri
MGP_SPRETEiJ_G0030699	Pop4	100	43.404	ENSEBUG00000004305	pop4	100	42.489	Eptatretus_burgeri
MGP_SPRETEiJ_G0030699	Pop4	100	45.909	ENSEBUG00000008575	pop4	100	45.909	Eptatretus_burgeri
MGP_SPRETEiJ_G0030699	Pop4	100	82.692	ENSECAG00000020206	POP4	78	82.692	Equus_caballus
MGP_SPRETEiJ_G0030699	Pop4	89	60.406	ENSEEUG00000013109	POP4	99	61.421	Erinaceus_europaeus
MGP_SPRETEiJ_G0030699	Pop4	88	64.767	ENSELUG00000019812	pop4	88	64.767	Esox_lucius
MGP_SPRETEiJ_G0030699	Pop4	100	81.818	ENSFCAG00000001619	POP4	100	82.727	Felis_catus
MGP_SPRETEiJ_G0030699	Pop4	98	67.130	ENSFALG00000000206	POP4	96	68.056	Ficedula_albicollis
MGP_SPRETEiJ_G0030699	Pop4	100	83.636	ENSFDAG00000017859	POP4	100	84.545	Fukomys_damarensis
MGP_SPRETEiJ_G0030699	Pop4	89	56.716	ENSFHEG00000012745	pop4	90	55.500	Fundulus_heteroclitus
MGP_SPRETEiJ_G0030699	Pop4	89	61.307	ENSGMOG00000000335	pop4	98	60.302	Gadus_morhua
MGP_SPRETEiJ_G0030699	Pop4	100	65.455	ENSGALG00000041972	POP4	92	65.000	Gallus_gallus
MGP_SPRETEiJ_G0030699	Pop4	79	54.494	ENSGAFG00000003571	pop4	98	53.107	Gambusia_affinis
MGP_SPRETEiJ_G0030699	Pop4	92	60.976	ENSGACG00000014510	pop4	98	63.333	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0030699	Pop4	100	70.455	ENSGAGG00000024544	POP4	79	70.455	Gopherus_agassizii
MGP_SPRETEiJ_G0030699	Pop4	99	82.569	ENSGGOG00000038346	POP4	99	82.569	Gorilla_gorilla
MGP_SPRETEiJ_G0030699	Pop4	92	62.069	ENSHBUG00000021821	pop4	91	60.891	Haplochromis_burtoni
MGP_SPRETEiJ_G0030699	Pop4	99	84.862	ENSHGLG00000015798	POP4	99	85.780	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0030699	Pop4	100	84.545	ENSHGLG00100009737	POP4	100	85.455	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0030699	Pop4	89	65.306	ENSHCOG00000020937	pop4	88	64.103	Hippocampus_comes
MGP_SPRETEiJ_G0030699	Pop4	100	57.273	ENSIPUG00000013652	pop4	100	57.273	Ictalurus_punctatus
MGP_SPRETEiJ_G0030699	Pop4	100	84.091	ENSSTOG00000011016	POP4	100	85.000	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0030699	Pop4	100	85.909	ENSJJAG00000013376	Pop4	100	86.364	Jaculus_jaculus
MGP_SPRETEiJ_G0030699	Pop4	99	62.443	ENSKMAG00000012250	pop4	99	61.364	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0030699	Pop4	99	56.306	ENSLBEG00000014139	pop4	99	55.909	Labrus_bergylta
MGP_SPRETEiJ_G0030699	Pop4	99	55.856	ENSLBEG00000018846	-	99	55.455	Labrus_bergylta
MGP_SPRETEiJ_G0030699	Pop4	99	62.673	ENSLACG00000008581	POP4	98	63.134	Latimeria_chalumnae
MGP_SPRETEiJ_G0030699	Pop4	100	65.909	ENSLOCG00000005597	pop4	100	65.909	Lepisosteus_oculatus
MGP_SPRETEiJ_G0030699	Pop4	100	83.182	ENSLAFG00000000084	POP4	100	83.636	Loxodonta_africana
MGP_SPRETEiJ_G0030699	Pop4	100	83.182	ENSMFAG00000029606	POP4	100	83.182	Macaca_fascicularis
MGP_SPRETEiJ_G0030699	Pop4	100	82.805	ENSMMUG00000017424	POP4	100	82.353	Macaca_mulatta
MGP_SPRETEiJ_G0030699	Pop4	100	82.805	ENSMNEG00000031374	POP4	100	82.353	Macaca_nemestrina
MGP_SPRETEiJ_G0030699	Pop4	100	83.182	ENSMLEG00000043454	POP4	100	82.727	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0030699	Pop4	84	66.667	ENSMAMG00000011716	pop4	92	63.636	Mastacembelus_armatus
MGP_SPRETEiJ_G0030699	Pop4	92	62.069	ENSMZEG00005002360	pop4	91	60.891	Maylandia_zebra
MGP_SPRETEiJ_G0030699	Pop4	99	64.679	ENSMGAG00000005337	POP4	97	66.055	Meleagris_gallopavo
MGP_SPRETEiJ_G0030699	Pop4	100	90.455	ENSMAUG00000020110	Pop4	100	90.455	Mesocricetus_auratus
MGP_SPRETEiJ_G0030699	Pop4	99	79.358	ENSMICG00000035730	POP4	98	80.275	Microcebus_murinus
MGP_SPRETEiJ_G0030699	Pop4	99	60.550	ENSMMOG00000015321	pop4	99	60.550	Mola_mola
MGP_SPRETEiJ_G0030699	Pop4	99	75.576	ENSMODG00000029406	POP4	94	76.498	Monodelphis_domestica
MGP_SPRETEiJ_G0030699	Pop4	94	62.981	ENSMALG00000012571	pop4	94	62.802	Monopterus_albus
MGP_SPRETEiJ_G0030699	Pop4	100	98.643	MGP_CAROLIEiJ_G0029600	Pop4	100	98.643	Mus_caroli
MGP_SPRETEiJ_G0030699	Pop4	100	98.643	ENSMUSG00000030423	Pop4	100	98.643	Mus_musculus
MGP_SPRETEiJ_G0030699	Pop4	100	80.455	ENSMPUG00000008041	-	100	81.364	Mustela_putorius_furo
MGP_SPRETEiJ_G0030699	Pop4	100	71.041	ENSMPUG00000008063	-	100	71.493	Mustela_putorius_furo
MGP_SPRETEiJ_G0030699	Pop4	99	63.470	ENSMLUG00000010774	POP4	99	63.470	Myotis_lucifugus
MGP_SPRETEiJ_G0030699	Pop4	57	81.600	ENSMEUG00000003636	-	100	81.600	Notamacropus_eugenii
MGP_SPRETEiJ_G0030699	Pop4	90	87.437	ENSOPRG00000004736	POP4	99	87.940	Ochotona_princeps
MGP_SPRETEiJ_G0030699	Pop4	99	83.486	ENSODEG00000013025	POP4	100	85.849	Octodon_degus
MGP_SPRETEiJ_G0030699	Pop4	92	61.576	ENSONIG00000003458	pop4	90	60.396	Oreochromis_niloticus
MGP_SPRETEiJ_G0030699	Pop4	100	84.091	ENSOCUG00000015974	POP4	100	85.000	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0030699	Pop4	90	60.976	ENSORLG00000020317	pop4	92	59.804	Oryzias_latipes
MGP_SPRETEiJ_G0030699	Pop4	92	59.709	ENSORLG00015011624	pop4	91	58.824	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0030699	Pop4	89	63.500	ENSOMEG00000002538	pop4	89	61.809	Oryzias_melastigma
MGP_SPRETEiJ_G0030699	Pop4	99	83.028	ENSOGAG00000011168	POP4	99	83.028	Otolemur_garnettii
MGP_SPRETEiJ_G0030699	Pop4	100	82.353	ENSOARG00000004041	POP4	100	83.258	Ovis_aries
MGP_SPRETEiJ_G0030699	Pop4	100	82.727	ENSPPAG00000040372	POP4	100	82.727	Pan_paniscus
MGP_SPRETEiJ_G0030699	Pop4	100	81.818	ENSPPRG00000010502	POP4	100	82.727	Panthera_pardus
MGP_SPRETEiJ_G0030699	Pop4	100	81.818	ENSPTIG00000016598	POP4	100	82.727	Panthera_tigris_altaica
MGP_SPRETEiJ_G0030699	Pop4	100	82.727	ENSPTRG00000010779	POP4	100	82.727	Pan_troglodytes
MGP_SPRETEiJ_G0030699	Pop4	100	83.182	ENSPANG00000008546	POP4	100	83.182	Papio_anubis
MGP_SPRETEiJ_G0030699	Pop4	89	66.667	ENSPKIG00000004468	pop4	87	66.667	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0030699	Pop4	100	70.909	ENSPSIG00000015690	POP4	98	75.758	Pelodiscus_sinensis
MGP_SPRETEiJ_G0030699	Pop4	90	56.650	ENSPMGG00000008608	pop4	97	56.650	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0030699	Pop4	99	75.229	ENSPEMG00000019982	-	100	76.147	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0030699	Pop4	100	89.545	ENSPEMG00000014034	-	96	90.455	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0030699	Pop4	66	65.517	ENSPMAG00000006265	pop4	73	65.517	Petromyzon_marinus
MGP_SPRETEiJ_G0030699	Pop4	100	77.477	ENSPCIG00000024738	POP4	95	77.273	Phascolarctos_cinereus
MGP_SPRETEiJ_G0030699	Pop4	89	62.437	ENSPFOG00000000925	pop4	88	61.735	Poecilia_formosa
MGP_SPRETEiJ_G0030699	Pop4	89	62.437	ENSPLAG00000003161	pop4	88	61.735	Poecilia_latipinna
MGP_SPRETEiJ_G0030699	Pop4	89	62.437	ENSPMEG00000002475	pop4	88	61.735	Poecilia_mexicana
MGP_SPRETEiJ_G0030699	Pop4	92	60.784	ENSPREG00000022403	pop4	88	59.606	Poecilia_reticulata
MGP_SPRETEiJ_G0030699	Pop4	100	83.182	ENSPPYG00000009805	POP4	100	83.182	Pongo_abelii
MGP_SPRETEiJ_G0030699	Pop4	99	75.799	ENSPCAG00000007737	POP4	99	75.799	Procavia_capensis
MGP_SPRETEiJ_G0030699	Pop4	100	81.818	ENSPCOG00000018055	POP4	100	82.727	Propithecus_coquereli
MGP_SPRETEiJ_G0030699	Pop4	100	80.000	ENSPVAG00000006069	POP4	100	80.000	Pteropus_vampyrus
MGP_SPRETEiJ_G0030699	Pop4	92	62.069	ENSPNYG00000020038	pop4	91	60.891	Pundamilia_nyererei
MGP_SPRETEiJ_G0030699	Pop4	88	65.464	ENSPNAG00000005591	pop4	88	63.918	Pygocentrus_nattereri
MGP_SPRETEiJ_G0030699	Pop4	100	95.023	ENSRNOG00000027646	Pop4	100	94.118	Rattus_norvegicus
MGP_SPRETEiJ_G0030699	Pop4	79	80.000	ENSRBIG00000044769	POP4	89	82.609	Rhinopithecus_bieti
MGP_SPRETEiJ_G0030699	Pop4	100	83.182	ENSRROG00000028903	POP4	100	83.182	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0030699	Pop4	58	33.813	YBR257W	-	50	33.813	Saccharomyces_cerevisiae
MGP_SPRETEiJ_G0030699	Pop4	100	83.182	ENSSBOG00000032445	POP4	100	82.727	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0030699	Pop4	98	75.926	ENSSHAG00000016888	POP4	98	75.463	Sarcophilus_harrisii
MGP_SPRETEiJ_G0030699	Pop4	92	64.677	ENSSFOG00015014556	pop4	90	64.677	Scleropages_formosus
MGP_SPRETEiJ_G0030699	Pop4	89	65.000	ENSSMAG00000016611	pop4	93	63.819	Scophthalmus_maximus
MGP_SPRETEiJ_G0030699	Pop4	92	62.439	ENSSDUG00000019865	pop4	82	61.275	Seriola_dumerili
MGP_SPRETEiJ_G0030699	Pop4	96	61.395	ENSSLDG00000001763	pop4	92	60.280	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0030699	Pop4	98	84.259	ENSSARG00000004748	POP4	99	85.648	Sorex_araneus
MGP_SPRETEiJ_G0030699	Pop4	99	61.712	ENSSPAG00000014364	pop4	98	60.455	Stegastes_partitus
MGP_SPRETEiJ_G0030699	Pop4	100	85.000	ENSSSCG00000002854	POP4	100	85.000	Sus_scrofa
MGP_SPRETEiJ_G0030699	Pop4	90	71.212	ENSTGUG00000008953	POP4	99	72.222	Taeniopygia_guttata
MGP_SPRETEiJ_G0030699	Pop4	92	61.275	ENSTNIG00000006401	pop4	100	61.275	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0030699	Pop4	100	83.258	ENSTBEG00000002194	POP4	100	84.163	Tupaia_belangeri
MGP_SPRETEiJ_G0030699	Pop4	100	81.818	ENSTTRG00000005882	POP4	100	81.818	Tursiops_truncatus
MGP_SPRETEiJ_G0030699	Pop4	100	79.545	ENSUAMG00000003049	-	100	80.455	Ursus_americanus
MGP_SPRETEiJ_G0030699	Pop4	100	79.545	ENSUMAG00000007522	-	100	80.455	Ursus_maritimus
MGP_SPRETEiJ_G0030699	Pop4	92	81.683	ENSVVUG00000016876	-	71	82.178	Vulpes_vulpes
MGP_SPRETEiJ_G0030699	Pop4	98	67.442	ENSXETG00000017598	pop4	98	67.442	Xenopus_tropicalis
MGP_SPRETEiJ_G0030699	Pop4	92	61.165	ENSXCOG00000017695	pop4	88	60.488	Xiphophorus_couchianus
MGP_SPRETEiJ_G0030699	Pop4	92	61.165	ENSXMAG00000013862	pop4	88	60.488	Xiphophorus_maculatus