EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0030709 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 29596 bases
Position: chr7:30269728-30299323
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0082465	zf-C2H2	PF00096.26	3e-50	1	9
MGP_SPRETEiJ_P0082465	zf-C2H2	PF00096.26	3e-50	2	9
MGP_SPRETEiJ_P0082465	zf-C2H2	PF00096.26	3e-50	3	9
MGP_SPRETEiJ_P0082465	zf-C2H2	PF00096.26	3e-50	4	9
MGP_SPRETEiJ_P0082465	zf-C2H2	PF00096.26	3e-50	5	9
MGP_SPRETEiJ_P0082465	zf-C2H2	PF00096.26	3e-50	6	9
MGP_SPRETEiJ_P0082465	zf-C2H2	PF00096.26	3e-50	7	9
MGP_SPRETEiJ_P0082465	zf-C2H2	PF00096.26	3e-50	8	9
MGP_SPRETEiJ_P0082465	zf-C2H2	PF00096.26	3e-50	9	9
MGP_SPRETEiJ_P0082465	zf-met	PF12874.7	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0082465	-	3247	-	MGP_SPRETEiJ_P0082465	338 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0030709's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0030709's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0030709	-	99	53.879	MGP_SPRETEiJ_G0025181	Zfp661	94	53.879
MGP_SPRETEiJ_G0030709	-	100	50.189	MGP_SPRETEiJ_G0032697	Zfp1	100	50.189
MGP_SPRETEiJ_G0030709	-	98	51.145	MGP_SPRETEiJ_G0019544	Zfp759	99	51.145
MGP_SPRETEiJ_G0030709	-	98	58.779	MGP_SPRETEiJ_G0020852	Zfp251	94	58.779
MGP_SPRETEiJ_G0030709	-	81	45.455	MGP_SPRETEiJ_G0023360	Zfp236	69	45.455
MGP_SPRETEiJ_G0030709	-	98	56.757	MGP_SPRETEiJ_G0019543	-	74	56.757
MGP_SPRETEiJ_G0030709	-	80	47.423	MGP_SPRETEiJ_G0028173	Zbtb49	62	51.389
MGP_SPRETEiJ_G0030709	-	98	57.529	MGP_SPRETEiJ_G0019560	Zfp748	99	57.529
MGP_SPRETEiJ_G0030709	-	81	47.674	MGP_SPRETEiJ_G0027723	Zbtb17	58	47.674
MGP_SPRETEiJ_G0030709	-	100	54.902	MGP_SPRETEiJ_G0030420	Zfp108	99	54.902
MGP_SPRETEiJ_G0030709	-	81	48.780	MGP_SPRETEiJ_G0030188	Zfp628	60	48.780
MGP_SPRETEiJ_G0030709	-	98	54.815	MGP_SPRETEiJ_G0030713	Zfp715	95	54.815
MGP_SPRETEiJ_G0030709	-	81	40.571	MGP_SPRETEiJ_G0029467	Prdm5	75	40.571
MGP_SPRETEiJ_G0030709	-	78	55.263	MGP_SPRETEiJ_G0029346	Repin1	92	40.864
MGP_SPRETEiJ_G0030709	-	98	49.225	MGP_SPRETEiJ_G0017272	Zfp867	95	49.225
MGP_SPRETEiJ_G0030709	-	97	54.676	MGP_SPRETEiJ_G0029809	Zfp637	82	54.676
MGP_SPRETEiJ_G0030709	-	78	43.820	MGP_SPRETEiJ_G0025644	Zfp64	69	38.768
MGP_SPRETEiJ_G0030709	-	85	47.186	MGP_SPRETEiJ_G0019129	Zkscan4	55	50.000
MGP_SPRETEiJ_G0030709	-	95	46.296	MGP_SPRETEiJ_G0030196	-	86	38.340
MGP_SPRETEiJ_G0030709	-	83	38.017	MGP_SPRETEiJ_G0032539	Zfp319	91	39.326
MGP_SPRETEiJ_G0030709	-	98	55.513	MGP_SPRETEiJ_G0030415	Zfp112	63	55.513
MGP_SPRETEiJ_G0030709	-	99	51.178	MGP_SPRETEiJ_G0030417	Zfp114	99	51.178
MGP_SPRETEiJ_G0030709	-	99	57.143	MGP_SPRETEiJ_G0030416	Zfp235	99	57.143
MGP_SPRETEiJ_G0030709	-	100	55.926	MGP_SPRETEiJ_G0022052	Zfp945	99	55.926
MGP_SPRETEiJ_G0030709	-	82	44.853	MGP_SPRETEiJ_G0022057	Zscan10	79	44.853
MGP_SPRETEiJ_G0030709	-	81	47.556	MGP_SPRETEiJ_G0031614	-	84	47.556
MGP_SPRETEiJ_G0030709	-	78	51.190	MGP_SPRETEiJ_G0031612	Zfp768	61	51.136
MGP_SPRETEiJ_G0030709	-	81	47.556	MGP_SPRETEiJ_G0031613	-	84	47.556
MGP_SPRETEiJ_G0030709	-	86	60.837	MGP_SPRETEiJ_G0030586	Zfp420	98	60.837
MGP_SPRETEiJ_G0030709	-	86	55.294	MGP_SPRETEiJ_G0030421	-	99	55.556
MGP_SPRETEiJ_G0030709	-	98	54.077	MGP_SPRETEiJ_G0030422	Zfp61	99	54.077
MGP_SPRETEiJ_G0030709	-	86	57.034	MGP_SPRETEiJ_G0030423	Zfp94	96	57.034
MGP_SPRETEiJ_G0030709	-	82	50.704	MGP_SPRETEiJ_G0017233	Zfp672	94	50.704
MGP_SPRETEiJ_G0030709	-	85	43.119	MGP_SPRETEiJ_G0030453	Zfp574	71	42.667
MGP_SPRETEiJ_G0030709	-	86	46.565	MGP_SPRETEiJ_G0030525	-	78	47.037
MGP_SPRETEiJ_G0030709	-	81	46.183	MGP_SPRETEiJ_G0030524	Zfp59	76	46.183
MGP_SPRETEiJ_G0030709	-	82	48.881	MGP_SPRETEiJ_G0030526	-	85	48.881

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0030709	-	93	57.955	ENSACIG00000017647	-	94	57.576	Amphilophus_citrinellus
MGP_SPRETEiJ_G0030709	-	83	61.404	ENSAOCG00000003277	-	70	61.404	Amphiprion_ocellaris
MGP_SPRETEiJ_G0030709	-	85	42.146	ENSAPEG00000016601	-	82	43.704	Amphiprion_percula
MGP_SPRETEiJ_G0030709	-	67	51.020	ENSACLG00000005615	-	53	51.020	Astatotilapia_calliptera
MGP_SPRETEiJ_G0030709	-	88	50.588	ENSACLG00000015989	-	96	50.588	Astatotilapia_calliptera
MGP_SPRETEiJ_G0030709	-	80	49.545	ENSCSAVG00000002179	-	99	49.545	Ciona_savignyi
MGP_SPRETEiJ_G0030709	-	80	45.329	ENSCGRG00001004047	-	64	49.237	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0030709	-	88	47.253	ENSCSEG00000001771	-	66	47.253	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0030709	-	98	51.254	ENSEBUG00000002589	-	94	51.807	Eptatretus_burgeri
MGP_SPRETEiJ_G0030709	-	84	50.929	ENSEBUG00000011244	-	81	50.929	Eptatretus_burgeri
MGP_SPRETEiJ_G0030709	-	81	52.191	ENSEBUG00000002537	-	87	52.191	Eptatretus_burgeri
MGP_SPRETEiJ_G0030709	-	83	54.054	ENSHBUG00000012758	-	88	54.054	Haplochromis_burtoni
MGP_SPRETEiJ_G0030709	-	77	44.097	ENSHBUG00000016546	-	67	47.561	Haplochromis_burtoni
MGP_SPRETEiJ_G0030709	-	67	51.020	ENSHBUG00000020071	-	53	51.020	Haplochromis_burtoni
MGP_SPRETEiJ_G0030709	-	93	44.891	ENSMZEG00005020731	-	99	44.891	Maylandia_zebra
MGP_SPRETEiJ_G0030709	-	77	44.444	ENSMZEG00005027844	-	67	47.967	Maylandia_zebra
MGP_SPRETEiJ_G0030709	-	100	94.982	MGP_CAROLIEiJ_G0029612	Zfp141	67	94.982	Mus_caroli
MGP_SPRETEiJ_G0030709	-	100	96.057	ENSMUSG00000092416	Zfp141	67	96.057	Mus_musculus
MGP_SPRETEiJ_G0030709	-	83	53.906	ENSNBRG00000023229	-	93	53.906	Neolamprologus_brichardi
MGP_SPRETEiJ_G0030709	-	77	50.521	ENSONIG00000014100	-	86	50.521	Oreochromis_niloticus
MGP_SPRETEiJ_G0030709	-	83	41.924	ENSONIG00000006238	-	99	41.924	Oreochromis_niloticus
MGP_SPRETEiJ_G0030709	-	80	50.741	ENSONIG00000018188	-	100	50.741	Oreochromis_niloticus
MGP_SPRETEiJ_G0030709	-	78	47.337	ENSPFOG00000007708	-	99	42.578	Poecilia_formosa
MGP_SPRETEiJ_G0030709	-	81	50.562	ENSPLAG00000010448	-	52	49.533	Poecilia_latipinna
MGP_SPRETEiJ_G0030709	-	100	52.852	ENSPCAG00000001613	-	100	52.852	Procavia_capensis
MGP_SPRETEiJ_G0030709	-	81	49.042	ENSPNYG00000005671	-	74	49.042	Pundamilia_nyererei
MGP_SPRETEiJ_G0030709	-	83	60.987	ENSPNAG00000015131	-	85	60.987	Pygocentrus_nattereri
MGP_SPRETEiJ_G0030709	-	96	54.064	ENSSFOG00015000652	ZNF775	83	54.064	Scleropages_formosus
MGP_SPRETEiJ_G0030709	-	82	55.000	ENSSDUG00000005401	-	89	54.406	Seriola_dumerili
MGP_SPRETEiJ_G0030709	-	85	48.795	ENSSDUG00000020595	-	84	48.795	Seriola_dumerili
MGP_SPRETEiJ_G0030709	-	91	48.889	ENSSDUG00000004089	-	91	48.889	Seriola_dumerili
MGP_SPRETEiJ_G0030709	-	83	52.734	ENSSPUG00000007064	-	98	56.627	Sphenodon_punctatus
MGP_SPRETEiJ_G0030709	-	82	46.445	ENSSPAG00000009587	-	94	46.581	Stegastes_partitus
MGP_SPRETEiJ_G0030709	-	98	50.711	ENSTTRG00000004891	-	98	50.711	Tursiops_truncatus
MGP_SPRETEiJ_G0030709	-	80	54.274	ENSXETG00000030967	-	94	54.274	Xenopus_tropicalis
MGP_SPRETEiJ_G0030709	-	78	45.833	ENSXETG00000015125	-	95	45.833	Xenopus_tropicalis