EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0030962 (Gene tree)
Gene ID: -
Gene Symbol: Chd2
Alias: 2810013C04Rik|2810040A01Rik|5630401D06Rik
Full Name: chromodomain helicase DNA binding protein 2
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 122179 bases
Position: chr7:61372758-61494936
Accession: 2448567
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0083459	ResIII	PF04851.15	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0083471	-	748	-	MGP_SPRETEiJ_P0083471	178 (aa)	-	-
MGP_SPRETEiJ_T0083472	-	896	-	MGP_SPRETEiJ_P0083472	57 (aa)	-	UPI0006644D3F
MGP_SPRETEiJ_T0083470	-	1626	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0083475	-	1383	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0083459	-	9090	-	MGP_SPRETEiJ_P0083459	1827 (aa)	-	-
MGP_SPRETEiJ_T0083474	-	1196	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0083473	-	3730	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0083468	-	360	-	MGP_SPRETEiJ_P0083468	120 (aa)	-	UPI000620ABCB
MGP_SPRETEiJ_T0083469	-	1571	-	MGP_SPRETEiJ_P0083469	333 (aa)	-	-
MGP_SPRETEiJ_T0083466	-	392	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0083467	-	558	-	MGP_SPRETEiJ_P0083467	74 (aa)	-	UPI000620AA51
MGP_SPRETEiJ_T0083464	-	582	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0083465	-	339	-	MGP_SPRETEiJ_P0083465	112 (aa)	-	-
MGP_SPRETEiJ_T0083462	-	667	-	MGP_SPRETEiJ_P0083462	35 (aa)	-	UPI000268AE5F
MGP_SPRETEiJ_T0083463	-	687	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0083460	-	5294	-	MGP_SPRETEiJ_P0083460	219 (aa)	-	-
MGP_SPRETEiJ_T0083461	-	487	-	MGP_SPRETEiJ_P0083461	162 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0030962's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0030962's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0030962	Chd2	62	32.663	MGP_SPRETEiJ_G0025526	Chd6	61	37.927

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0030962	Chd2	100	96.554	ENSG00000173575	CHD2	100	97.143	Homo_sapiens
MGP_SPRETEiJ_G0030962	Chd2	96	72.676	ENSAPOG00000008913	chd2	100	72.273	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0030962	Chd2	63	97.483	ENSAMEG00000010805	-	100	97.483	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0030962	Chd2	96	70.348	ENSAOCG00000016332	chd2	100	70.038	Amphiprion_ocellaris
MGP_SPRETEiJ_G0030962	Chd2	96	72.646	ENSAPEG00000016676	chd2	100	72.243	Amphiprion_percula
MGP_SPRETEiJ_G0030962	Chd2	96	72.172	ENSATEG00000005246	chd2	100	71.820	Anabas_testudineus
MGP_SPRETEiJ_G0030962	Chd2	100	87.120	ENSAPLG00000011141	-	100	87.120	Anas_platyrhynchos
MGP_SPRETEiJ_G0030962	Chd2	98	80.507	ENSACAG00000000088	-	99	79.913	Anolis_carolinensis
MGP_SPRETEiJ_G0030962	Chd2	100	96.552	ENSANAG00000024017	-	100	96.552	Aotus_nancymaae
MGP_SPRETEiJ_G0030962	Chd2	100	96.497	ENSCJAG00000020444	-	100	96.497	Callithrix_jacchus
MGP_SPRETEiJ_G0030962	Chd2	99	96.514	ENSCAFG00000010998	CHD2	100	96.954	Canis_familiaris
MGP_SPRETEiJ_G0030962	Chd2	99	93.850	ENSCHIG00000022261	-	99	94.497	Capra_hircus
MGP_SPRETEiJ_G0030962	Chd2	100	96.442	ENSTSYG00000003272	-	100	96.442	Carlito_syrichta
MGP_SPRETEiJ_G0030962	Chd2	93	95.541	ENSCPOG00000005800	-	100	95.541	Cavia_porcellus
MGP_SPRETEiJ_G0030962	Chd2	100	96.552	ENSCCAG00000035304	-	100	96.552	Cebus_capucinus
MGP_SPRETEiJ_G0030962	Chd2	100	96.499	ENSCATG00000031069	-	100	96.499	Cercocebus_atys
MGP_SPRETEiJ_G0030962	Chd2	100	95.569	ENSCLAG00000016269	-	100	95.569	Chinchilla_lanigera
MGP_SPRETEiJ_G0030962	Chd2	100	96.554	ENSCSAG00000017007	-	100	96.554	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0030962	Chd2	78	94.545	ENSCHOG00000000608	-	81	94.545	Choloepus_hoffmanni
MGP_SPRETEiJ_G0030962	Chd2	81	87.289	ENSCPBG00000018049	-	95	91.325	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0030962	Chd2	74	54.124	ENSCSAVG00000007580	-	93	60.000	Ciona_savignyi
MGP_SPRETEiJ_G0030962	Chd2	100	96.444	ENSCANG00000038126	-	100	96.444	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0030962	Chd2	100	97.865	ENSCGRG00001006649	Chd2	100	97.865	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0030962	Chd2	100	97.865	ENSCGRG00000018154	Chd2	100	97.865	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0030962	Chd2	98	63.904	ENSCSEG00000003646	chd2	93	66.316	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0030962	Chd2	100	63.929	ENSCVAG00000002427	chd2	99	71.214	Cyprinodon_variegatus
MGP_SPRETEiJ_G0030962	Chd2	96	70.406	ENSDARG00000060687	chd2	100	72.120	Danio_rerio
MGP_SPRETEiJ_G0030962	Chd2	99	95.733	ENSDNOG00000009796	-	100	95.733	Dasypus_novemcinctus
MGP_SPRETEiJ_G0030962	Chd2	50	75.532	ENSEBUG00000014994	chd2	83	75.532	Eptatretus_burgeri
MGP_SPRETEiJ_G0030962	Chd2	99	96.184	ENSEASG00005015526	-	99	97.917	Equus_asinus_asinus
MGP_SPRETEiJ_G0030962	Chd2	95	71.889	ENSELUG00000017981	chd2	100	70.853	Esox_lucius
MGP_SPRETEiJ_G0030962	Chd2	100	88.411	ENSFALG00000010369	-	100	88.411	Ficedula_albicollis
MGP_SPRETEiJ_G0030962	Chd2	100	95.624	ENSFDAG00000020651	-	100	95.624	Fukomys_damarensis
MGP_SPRETEiJ_G0030962	Chd2	88	71.429	ENSFHEG00000002119	chd2	91	71.569	Fundulus_heteroclitus
MGP_SPRETEiJ_G0030962	Chd2	94	68.977	ENSGMOG00000002890	chd2	99	70.381	Gadus_morhua
MGP_SPRETEiJ_G0030962	Chd2	100	87.351	ENSGALG00000006949	CHD2	100	87.351	Gallus_gallus
MGP_SPRETEiJ_G0030962	Chd2	96	70.203	ENSGAFG00000001905	chd2	97	69.829	Gambusia_affinis
MGP_SPRETEiJ_G0030962	Chd2	91	70.659	ENSGACG00000013246	chd2	99	70.137	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0030962	Chd2	80	89.580	ENSGAGG00000013176	-	95	97.753	Gopherus_agassizii
MGP_SPRETEiJ_G0030962	Chd2	100	95.131	ENSGGOG00000015677	CHD2	100	95.131	Gorilla_gorilla
MGP_SPRETEiJ_G0030962	Chd2	100	71.820	ENSHBUG00000017947	chd2	100	72.067	Haplochromis_burtoni
MGP_SPRETEiJ_G0030962	Chd2	100	95.460	ENSHGLG00000004435	CHD2	100	95.460	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0030962	Chd2	100	94.803	ENSHGLG00100016376	-	100	94.803	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0030962	Chd2	98	67.914	ENSHCOG00000008855	chd2	98	67.015	Hippocampus_comes
MGP_SPRETEiJ_G0030962	Chd2	71	74.355	ENSIPUG00000000488	chd2	100	69.019	Ictalurus_punctatus
MGP_SPRETEiJ_G0030962	Chd2	100	96.444	ENSSTOG00000001270	-	100	96.444	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0030962	Chd2	100	96.004	ENSJJAG00000000213	Chd2	100	96.004	Jaculus_jaculus
MGP_SPRETEiJ_G0030962	Chd2	84	72.686	ENSKMAG00000015849	chd2	99	73.657	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0030962	Chd2	75	96.012	ENSLAFG00000016885	-	100	96.012	Loxodonta_africana
MGP_SPRETEiJ_G0030962	Chd2	100	96.608	ENSMFAG00000033343	-	100	96.608	Macaca_fascicularis
MGP_SPRETEiJ_G0030962	Chd2	100	96.608	ENSMMUG00000011782	-	100	96.608	Macaca_mulatta
MGP_SPRETEiJ_G0030962	Chd2	100	96.230	ENSMNEG00000036875	-	100	96.230	Macaca_nemestrina
MGP_SPRETEiJ_G0030962	Chd2	100	96.554	ENSMLEG00000035026	-	100	96.554	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0030962	Chd2	96	72.011	ENSMAMG00000009082	chd2	100	71.106	Mastacembelus_armatus
MGP_SPRETEiJ_G0030962	Chd2	99	87.370	ENSMGAG00000008966	-	99	87.321	Meleagris_gallopavo
MGP_SPRETEiJ_G0030962	Chd2	100	94.855	ENSMICG00000000332	-	99	95.829	Microcebus_murinus
MGP_SPRETEiJ_G0030962	Chd2	100	97.648	ENSMOCG00000015124	Chd2	100	97.648	Microtus_ochrogaster
MGP_SPRETEiJ_G0030962	Chd2	100	90.909	ENSMODG00000013158	-	100	91.072	Monodelphis_domestica
MGP_SPRETEiJ_G0030962	Chd2	100	99.507	MGP_CAROLIEiJ_G0029860	Chd2	100	99.507	Mus_caroli
MGP_SPRETEiJ_G0030962	Chd2	100	99.891	ENSMUSG00000078671	Chd2	100	99.891	Mus_musculus
MGP_SPRETEiJ_G0030962	Chd2	100	98.906	MGP_PahariEiJ_G0013082	Chd2	100	98.906	Mus_pahari
MGP_SPRETEiJ_G0030962	Chd2	100	96.442	ENSMPUG00000017577	-	100	96.442	Mustela_putorius_furo
MGP_SPRETEiJ_G0030962	Chd2	100	93.540	ENSMLUG00000009292	-	100	93.540	Myotis_lucifugus
MGP_SPRETEiJ_G0030962	Chd2	100	96.661	ENSNGAG00000010792	Chd2	100	96.661	Nannospalax_galili
MGP_SPRETEiJ_G0030962	Chd2	100	93.982	ENSNLEG00000012349	-	100	93.764	Nomascus_leucogenys
MGP_SPRETEiJ_G0030962	Chd2	71	88.764	ENSMEUG00000001522	-	77	88.722	Notamacropus_eugenii
MGP_SPRETEiJ_G0030962	Chd2	100	94.803	ENSODEG00000016028	-	100	94.803	Octodon_degus
MGP_SPRETEiJ_G0030962	Chd2	96	72.574	ENSONIG00000015136	chd2	100	72.151	Oreochromis_niloticus
MGP_SPRETEiJ_G0030962	Chd2	88	81.784	ENSOANG00000004385	-	100	81.660	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0030962	Chd2	100	85.862	ENSOCUG00000001628	-	99	96.505	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0030962	Chd2	96	71.951	ENSORLG00000008403	chd2	100	71.145	Oryzias_latipes
MGP_SPRETEiJ_G0030962	Chd2	96	72.144	ENSORLG00020004138	chd2	100	71.329	Oryzias_latipes_hni
MGP_SPRETEiJ_G0030962	Chd2	100	64.032	ENSOMEG00000005831	chd2	100	65.051	Oryzias_melastigma
MGP_SPRETEiJ_G0030962	Chd2	100	94.256	ENSOGAG00000010399	-	100	94.256	Otolemur_garnettii
MGP_SPRETEiJ_G0030962	Chd2	99	95.475	ENSOARG00000010343	-	100	94.311	Ovis_aries
MGP_SPRETEiJ_G0030962	Chd2	100	95.576	ENSPPAG00000030381	-	100	95.576	Pan_paniscus
MGP_SPRETEiJ_G0030962	Chd2	100	96.554	ENSPTRG00000007478	CHD2	100	96.554	Pan_troglodytes
MGP_SPRETEiJ_G0030962	Chd2	100	93.654	ENSPANG00000033355	-	100	93.654	Papio_anubis
MGP_SPRETEiJ_G0030962	Chd2	99	70.291	ENSPKIG00000000495	chd2	100	72.222	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0030962	Chd2	84	69.769	ENSPMGG00000009941	chd2	99	70.263	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0030962	Chd2	100	97.811	ENSPEMG00000019507	Chd2	100	97.811	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0030962	Chd2	91	91.617	ENSPCIG00000009417	-	100	90.643	Phascolarctos_cinereus
MGP_SPRETEiJ_G0030962	Chd2	96	72.651	ENSPFOG00000007050	chd2	100	72.151	Poecilia_formosa
MGP_SPRETEiJ_G0030962	Chd2	96	72.931	ENSPLAG00000005067	chd2	100	72.419	Poecilia_latipinna
MGP_SPRETEiJ_G0030962	Chd2	96	72.707	ENSPMEG00000019628	chd2	100	72.204	Poecilia_mexicana
MGP_SPRETEiJ_G0030962	Chd2	100	95.241	ENSPPYG00000006799	-	100	95.241	Pongo_abelii
MGP_SPRETEiJ_G0030962	Chd2	100	96.499	ENSPCOG00000028084	-	100	96.499	Propithecus_coquereli
MGP_SPRETEiJ_G0030962	Chd2	68	73.440	ENSPNAG00000016719	chd2	99	69.486	Pygocentrus_nattereri
MGP_SPRETEiJ_G0030962	Chd2	100	97.975	ENSRNOG00000012716	Chd2	100	97.975	Rattus_norvegicus
MGP_SPRETEiJ_G0030962	Chd2	100	94.478	ENSRBIG00000036875	-	100	94.478	Rhinopithecus_bieti
MGP_SPRETEiJ_G0030962	Chd2	100	96.554	ENSRROG00000041087	-	100	96.554	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0030962	Chd2	100	96.606	ENSSBOG00000023754	-	100	96.606	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0030962	Chd2	100	91.018	ENSSHAG00000012513	-	100	91.236	Sarcophilus_harrisii
MGP_SPRETEiJ_G0030962	Chd2	100	73.154	ENSSFOG00015023759	chd2	100	73.208	Scleropages_formosus
MGP_SPRETEiJ_G0030962	Chd2	96	71.308	ENSSMAG00000001726	chd2	100	70.585	Scophthalmus_maximus
MGP_SPRETEiJ_G0030962	Chd2	96	70.822	ENSSLDG00000001146	chd2	100	71.121	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0030962	Chd2	77	95.000	ENSSARG00000014112	-	82	95.000	Sorex_araneus
MGP_SPRETEiJ_G0030962	Chd2	99	83.287	ENSSPUG00000011266	-	99	83.232	Sphenodon_punctatus
MGP_SPRETEiJ_G0030962	Chd2	96	71.380	ENSSPAG00000016452	chd2	100	71.115	Stegastes_partitus
MGP_SPRETEiJ_G0030962	Chd2	100	96.335	ENSSSCG00000002266	-	100	96.458	Sus_scrofa
MGP_SPRETEiJ_G0030962	Chd2	100	88.216	ENSTGUG00000008540	-	100	88.216	Taeniopygia_guttata
MGP_SPRETEiJ_G0030962	Chd2	89	68.851	ENSTRUG00000008842	chd2	92	68.117	Takifugu_rubripes
MGP_SPRETEiJ_G0030962	Chd2	86	73.398	ENSTNIG00000010760	chd2	97	73.083	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0030962	Chd2	77	96.035	ENSTBEG00000017730	-	83	96.035	Tupaia_belangeri
MGP_SPRETEiJ_G0030962	Chd2	96	93.636	ENSTTRG00000000430	-	90	95.185	Tursiops_truncatus
MGP_SPRETEiJ_G0030962	Chd2	100	93.870	ENSUMAG00000000083	-	100	93.870	Ursus_maritimus
MGP_SPRETEiJ_G0030962	Chd2	83	97.292	ENSVPAG00000009645	-	86	97.292	Vicugna_pacos
MGP_SPRETEiJ_G0030962	Chd2	89	74.716	ENSXETG00000024129	chd2	73	81.240	Xenopus_tropicalis
MGP_SPRETEiJ_G0030962	Chd2	96	69.492	ENSXCOG00000020255	chd2	99	69.608	Xiphophorus_couchianus
MGP_SPRETEiJ_G0030962	Chd2	96	72.997	ENSXMAG00000002707	chd2	100	72.282	Xiphophorus_maculatus