EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0030974 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 15582 bases
Position: chr7:67006251-67021832
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0083537	RNase_T	PF00929.24	2.5e-09	1	1
MGP_SPRETEiJ_P0083539	RNase_T	PF00929.24	2.5e-09	1	1
MGP_SPRETEiJ_P0083538	RNase_T	PF00929.24	3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0083538	-	1763	-	MGP_SPRETEiJ_P0083538	218 (aa)	-	-
MGP_SPRETEiJ_T0083539	-	1986	-	MGP_SPRETEiJ_P0083539	256 (aa)	-	-
MGP_SPRETEiJ_T0083536	-	4401	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0083537	-	4689	-	MGP_SPRETEiJ_P0083537	256 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0030974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0030974's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0030974	-	63	51.095	MGP_SPRETEiJ_G0030975	-	80	50.862

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0030974	-	95	76.684	ENSG00000181026	AEN	81	73.762	Homo_sapiens
MGP_SPRETEiJ_G0030974	-	94	75.916	ENSAMEG00000012798	AEN	77	75.916	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0030974	-	95	77.835	ENSANAG00000026698	AEN	81	74.877	Aotus_nancymaae
MGP_SPRETEiJ_G0030974	-	95	78.351	ENSBTAG00000017632	AEN	79	75.369	Bos_taurus
MGP_SPRETEiJ_G0030974	-	95	77.320	ENSCJAG00000012988	AEN	81	74.384	Callithrix_jacchus
MGP_SPRETEiJ_G0030974	-	99	79.024	ENSCAFG00000011521	AEN	78	81.443	Canis_familiaris
MGP_SPRETEiJ_G0030974	-	95	80.928	ENSCAFG00020018839	AEN	78	80.928	Canis_lupus_dingo
MGP_SPRETEiJ_G0030974	-	95	78.866	ENSCHIG00000001561	AEN	78	78.866	Capra_hircus
MGP_SPRETEiJ_G0030974	-	95	81.347	ENSTSYG00000012416	AEN	78	81.347	Carlito_syrichta
MGP_SPRETEiJ_G0030974	-	89	58.974	ENSCAPG00000006550	-	85	58.974	Cavia_aperea
MGP_SPRETEiJ_G0030974	-	96	83.019	ENSCPOG00000021693	AEN	79	83.019	Cavia_porcellus
MGP_SPRETEiJ_G0030974	-	95	76.289	ENSCCAG00000037160	AEN	81	73.399	Cebus_capucinus
MGP_SPRETEiJ_G0030974	-	95	78.238	ENSCATG00000034567	AEN	81	78.238	Cercocebus_atys
MGP_SPRETEiJ_G0030974	-	89	78.610	ENSCLAG00000008791	AEN	82	74.272	Chinchilla_lanigera
MGP_SPRETEiJ_G0030974	-	95	78.238	ENSCSAG00000017196	AEN	81	78.238	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0030974	-	85	61.622	ENSCPBG00000017884	AEN	70	45.652	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0030974	-	95	79.275	ENSCANG00000037330	AEN	79	79.275	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0030974	-	95	95.652	ENSCGRG00001021559	Aen	78	95.652	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0030974	-	98	95.652	ENSCGRG00000000641	Aen	78	95.652	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0030974	-	89	84.358	ENSDNOG00000001849	-	79	84.358	Dasypus_novemcinctus
MGP_SPRETEiJ_G0030974	-	90	71.505	ENSDORG00000015546	Aen	80	70.370	Dipodomys_ordii
MGP_SPRETEiJ_G0030974	-	86	79.532	ENSETEG00000006167	AEN	77	79.532	Echinops_telfairi
MGP_SPRETEiJ_G0030974	-	95	79.381	ENSEASG00005015361	AEN	78	79.381	Equus_asinus_asinus
MGP_SPRETEiJ_G0030974	-	95	79.381	ENSECAG00000037942	AEN	78	79.381	Equus_caballus
MGP_SPRETEiJ_G0030974	-	83	71.271	ENSEEUG00000007015	AEN	63	71.271	Erinaceus_europaeus
MGP_SPRETEiJ_G0030974	-	95	74.877	ENSFCAG00000023571	AEN	81	74.877	Felis_catus
MGP_SPRETEiJ_G0030974	-	86	59.043	ENSFALG00000010440	AEN	51	59.043	Ficedula_albicollis
MGP_SPRETEiJ_G0030974	-	93	73.134	ENSFDAG00000009743	AEN	78	75.000	Fukomys_damarensis
MGP_SPRETEiJ_G0030974	-	95	76.684	ENSGGOG00000010180	AEN	81	73.762	Gorilla_gorilla
MGP_SPRETEiJ_G0030974	-	89	56.923	ENSHGLG00000008738	-	89	56.923	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0030974	-	92	74.872	ENSHGLG00100013826	AEN	80	74.490	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0030974	-	90	59.391	ENSSTOG00000011560	-	84	59.391	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0030974	-	87	60.000	ENSJJAG00000022647	-	85	57.789	Jaculus_jaculus
MGP_SPRETEiJ_G0030974	-	88	81.714	ENSLAFG00000015182	AEN	77	79.558	Loxodonta_africana
MGP_SPRETEiJ_G0030974	-	95	78.756	ENSMFAG00000001458	AEN	81	78.756	Macaca_fascicularis
MGP_SPRETEiJ_G0030974	-	95	78.756	ENSMMUG00000022516	AEN	81	78.756	Macaca_mulatta
MGP_SPRETEiJ_G0030974	-	95	79.275	ENSMNEG00000040133	AEN	81	79.275	Macaca_nemestrina
MGP_SPRETEiJ_G0030974	-	95	78.238	ENSMLEG00000032850	AEN	81	78.238	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0030974	-	96	83.249	ENSMAUG00000000489	Aen	80	80.097	Mesocricetus_auratus
MGP_SPRETEiJ_G0030974	-	91	79.275	ENSMICG00000027602	AEN	79	76.214	Microcebus_murinus
MGP_SPRETEiJ_G0030974	-	99	83.333	ENSMOCG00000011735	Aen	78	83.333	Microtus_ochrogaster
MGP_SPRETEiJ_G0030974	-	84	68.478	ENSMODG00000019584	-	55	68.478	Monodelphis_domestica
MGP_SPRETEiJ_G0030974	-	100	95.631	MGP_CAROLIEiJ_G0029872	Aen	79	95.631	Mus_caroli
MGP_SPRETEiJ_G0030974	-	100	95.146	ENSMUSG00000030609	Aen	79	95.146	Mus_musculus
MGP_SPRETEiJ_G0030974	-	100	92.233	MGP_PahariEiJ_G0013094	Aen	85	92.233	Mus_pahari
MGP_SPRETEiJ_G0030974	-	95	76.355	ENSMPUG00000015821	AEN	68	76.355	Mustela_putorius_furo
MGP_SPRETEiJ_G0030974	-	89	77.202	ENSMLUG00000023065	AEN	78	77.202	Myotis_lucifugus
MGP_SPRETEiJ_G0030974	-	91	83.607	ENSNGAG00000011590	Aen	79	80.208	Nannospalax_galili
MGP_SPRETEiJ_G0030974	-	95	78.756	ENSNLEG00000032314	AEN	81	75.743	Nomascus_leucogenys
MGP_SPRETEiJ_G0030974	-	78	66.279	ENSMEUG00000005303	-	55	66.279	Notamacropus_eugenii
MGP_SPRETEiJ_G0030974	-	86	59.043	ENSODEG00000015278	-	85	59.043	Octodon_degus
MGP_SPRETEiJ_G0030974	-	99	76.098	ENSOGAG00000029852	AEN	83	73.364	Otolemur_garnettii
MGP_SPRETEiJ_G0030974	-	95	76.804	ENSOARG00000010957	AEN	78	76.804	Ovis_aries
MGP_SPRETEiJ_G0030974	-	95	77.202	ENSPPAG00000039598	AEN	81	74.257	Pan_paniscus
MGP_SPRETEiJ_G0030974	-	95	77.835	ENSPPRG00000022756	AEN	80	74.877	Panthera_pardus
MGP_SPRETEiJ_G0030974	-	65	82.927	ENSPTIG00000018966	AEN	54	80.952	Panthera_tigris_altaica
MGP_SPRETEiJ_G0030974	-	95	77.202	ENSPTRG00000007422	AEN	81	74.257	Pan_troglodytes
MGP_SPRETEiJ_G0030974	-	95	78.238	ENSPANG00000005905	AEN	81	78.238	Papio_anubis
MGP_SPRETEiJ_G0030974	-	79	64.535	ENSPSIG00000014281	AEN	53	64.535	Pelodiscus_sinensis
MGP_SPRETEiJ_G0030974	-	96	82.741	ENSPEMG00000020445	Aen	78	82.741	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0030974	-	87	69.061	ENSPCIG00000006401	-	51	69.061	Phascolarctos_cinereus
MGP_SPRETEiJ_G0030974	-	95	79.275	ENSPPYG00000006755	AEN	81	76.238	Pongo_abelii
MGP_SPRETEiJ_G0030974	-	87	74.074	ENSPCAG00000015481	AEN	72	74.074	Procavia_capensis
MGP_SPRETEiJ_G0030974	-	96	79.188	ENSPCOG00000020924	AEN	81	76.214	Propithecus_coquereli
MGP_SPRETEiJ_G0030974	-	87	84.302	ENSPVAG00000007189	AEN	74	80.663	Pteropus_vampyrus
MGP_SPRETEiJ_G0030974	-	100	89.320	ENSRNOG00000018421	Aen	78	89.320	Rattus_norvegicus
MGP_SPRETEiJ_G0030974	-	95	78.238	ENSRBIG00000031540	AEN	79	78.238	Rhinopithecus_bieti
MGP_SPRETEiJ_G0030974	-	95	79.275	ENSRROG00000043282	AEN	79	79.275	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0030974	-	95	76.804	ENSSBOG00000021857	AEN	82	73.892	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0030974	-	89	68.508	ENSSHAG00000017070	-	55	68.508	Sarcophilus_harrisii
MGP_SPRETEiJ_G0030974	-	93	81.675	ENSSSCG00000005102	AEN	80	78.500	Sus_scrofa
MGP_SPRETEiJ_G0030974	-	86	60.638	ENSTGUG00000008335	AEN	62	60.638	Taeniopygia_guttata
MGP_SPRETEiJ_G0030974	-	87	83.140	ENSTBEG00000016234	AEN	76	79.558	Tupaia_belangeri
MGP_SPRETEiJ_G0030974	-	86	81.871	ENSTTRG00000014668	AEN	73	81.871	Tursiops_truncatus
MGP_SPRETEiJ_G0030974	-	80	78.857	ENSUAMG00000019063	-	100	78.857	Ursus_americanus
MGP_SPRETEiJ_G0030974	-	95	81.443	ENSVVUG00000012020	AEN	78	81.443	Vulpes_vulpes