EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0030975 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 6943 bases
Position: chr7:67024046-67030988
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0083540	RNase_T	PF00929.24	1.2e-16	1	1
MGP_SPRETEiJ_P0083542	RNase_T	PF00929.24	1.2e-16	1	1
MGP_SPRETEiJ_P0083544	RNase_T	PF00929.24	1.2e-16	1	1
MGP_SPRETEiJ_P0083545	RNase_T	PF00929.24	6.2e-12	1	1
MGP_SPRETEiJ_P0083541	RNase_T	PF00929.24	5.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0083545	-	834	-	MGP_SPRETEiJ_P0083545	145 (aa)	-	-
MGP_SPRETEiJ_T0083544	-	827	-	MGP_SPRETEiJ_P0083544	181 (aa)	-	-
MGP_SPRETEiJ_T0083541	-	1081	-	MGP_SPRETEiJ_P0083541	300 (aa)	-	-
MGP_SPRETEiJ_T0083540	-	697	-	MGP_SPRETEiJ_P0083540	181 (aa)	-	-
MGP_SPRETEiJ_T0083543	-	811	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0083542	-	1064	-	MGP_SPRETEiJ_P0083542	181 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0030975's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0030975's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0030975	-	80	50.862	MGP_SPRETEiJ_G0030974	-	63	51.095

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0030975	-	99	83.333	ENSG00000172183	ISG20	100	81.215	Homo_sapiens
MGP_SPRETEiJ_G0030975	-	100	68.966	ENSAMEG00000012803	ISG20	100	70.175	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0030975	-	94	51.449	ENSACIG00000012040	isg20	71	48.276	Amphilophus_citrinellus
MGP_SPRETEiJ_G0030975	-	87	39.877	ENSACAG00000013905	-	59	39.394	Anolis_carolinensis
MGP_SPRETEiJ_G0030975	-	99	72.222	ENSBTAG00000014762	ISG20	100	70.760	Bos_taurus
MGP_SPRETEiJ_G0030975	-	99	79.861	ENSCJAG00000034923	ISG20	100	78.453	Callithrix_jacchus
MGP_SPRETEiJ_G0030975	-	99	74.306	ENSCAFG00000011525	ISG20	100	72.515	Canis_familiaris
MGP_SPRETEiJ_G0030975	-	99	74.825	ENSCAFG00020018837	ISG20	100	72.515	Canis_lupus_dingo
MGP_SPRETEiJ_G0030975	-	99	72.222	ENSCHIG00000014526	ISG20	100	70.760	Capra_hircus
MGP_SPRETEiJ_G0030975	-	99	79.167	ENSTSYG00000030528	ISG20	97	77.143	Carlito_syrichta
MGP_SPRETEiJ_G0030975	-	99	74.306	ENSCAPG00000011672	ISG20	100	72.928	Cavia_aperea
MGP_SPRETEiJ_G0030975	-	99	74.306	ENSCPOG00000036489	ISG20	100	72.376	Cavia_porcellus
MGP_SPRETEiJ_G0030975	-	99	80.556	ENSCCAG00000025395	ISG20	100	78.453	Cebus_capucinus
MGP_SPRETEiJ_G0030975	-	99	81.944	ENSCATG00000042494	ISG20	100	79.558	Cercocebus_atys
MGP_SPRETEiJ_G0030975	-	99	75.694	ENSCLAG00000008100	ISG20	100	73.481	Chinchilla_lanigera
MGP_SPRETEiJ_G0030975	-	99	82.639	ENSCSAG00000017194	ISG20	100	80.110	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0030975	-	94	37.324	ENSCING00000004431	-	81	39.506	Ciona_intestinalis
MGP_SPRETEiJ_G0030975	-	99	81.944	ENSCANG00000032616	ISG20	100	80.110	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0030975	-	99	86.014	ENSCGRG00001016300	-	98	86.014	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0030975	-	99	85.417	ENSCGRG00000000609	-	99	84.615	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0030975	-	90	50.610	ENSCVAG00000009300	isg20	75	51.572	Cyprinodon_variegatus
MGP_SPRETEiJ_G0030975	-	94	46.784	ENSDARG00000102266	isg20l2	53	46.784	Danio_rerio
MGP_SPRETEiJ_G0030975	-	99	72.727	ENSDNOG00000049229	ISG20	99	68.889	Dasypus_novemcinctus
MGP_SPRETEiJ_G0030975	-	95	50.360	ENSEBUG00000009658	-	84	48.000	Eptatretus_burgeri
MGP_SPRETEiJ_G0030975	-	94	45.255	ENSEBUG00000010461	ISG20	56	48.101	Eptatretus_burgeri
MGP_SPRETEiJ_G0030975	-	99	73.611	ENSEASG00005015360	ISG20	99	74.556	Equus_asinus_asinus
MGP_SPRETEiJ_G0030975	-	99	73.611	ENSECAG00000019499	ISG20	99	74.556	Equus_caballus
MGP_SPRETEiJ_G0030975	-	99	71.528	ENSFCAG00000005151	ISG20	100	71.345	Felis_catus
MGP_SPRETEiJ_G0030975	-	99	75.000	ENSFDAG00000007444	ISG20	100	73.481	Fukomys_damarensis
MGP_SPRETEiJ_G0030975	-	87	50.314	ENSFHEG00000018658	isg20	69	45.763	Fundulus_heteroclitus
MGP_SPRETEiJ_G0030975	-	94	44.928	ENSGMOG00000001258	isg20	73	45.912	Gadus_morhua
MGP_SPRETEiJ_G0030975	-	94	48.905	ENSGALG00000044204	ISG20	63	50.000	Gallus_gallus
MGP_SPRETEiJ_G0030975	-	94	50.000	ENSGAFG00000005685	isg20	72	51.553	Gambusia_affinis
MGP_SPRETEiJ_G0030975	-	95	47.482	ENSGACG00000007047	isg20	50	49.375	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0030975	-	99	56.250	ENSGAGG00000013542	ISG20	96	55.689	Gopherus_agassizii
MGP_SPRETEiJ_G0030975	-	99	83.333	ENSGGOG00000010365	ISG20	100	81.215	Gorilla_gorilla
MGP_SPRETEiJ_G0030975	-	99	75.694	ENSHGLG00000009077	ISG20	100	74.586	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0030975	-	99	75.694	ENSHGLG00100005004	ISG20	100	74.586	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0030975	-	98	45.139	ENSHCOG00000013913	isg20l2	82	44.371	Hippocampus_comes
MGP_SPRETEiJ_G0030975	-	99	78.472	ENSSTOG00000020467	ISG20	97	78.286	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0030975	-	99	79.167	ENSJJAG00000010531	-	96	79.769	Jaculus_jaculus
MGP_SPRETEiJ_G0030975	-	94	48.175	ENSLACG00000018339	-	56	49.367	Latimeria_chalumnae
MGP_SPRETEiJ_G0030975	-	95	48.921	ENSLOCG00000014240	isg20	73	49.080	Lepisosteus_oculatus
MGP_SPRETEiJ_G0030975	-	99	81.944	ENSMFAG00000032331	ISG20	100	79.558	Macaca_fascicularis
MGP_SPRETEiJ_G0030975	-	99	81.944	ENSMMUG00000007669	ISG20	100	79.558	Macaca_mulatta
MGP_SPRETEiJ_G0030975	-	99	81.944	ENSMNEG00000030310	ISG20	100	79.558	Macaca_nemestrina
MGP_SPRETEiJ_G0030975	-	99	81.944	ENSMLEG00000038761	ISG20	100	79.558	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0030975	-	99	84.028	ENSMAUG00000015001	-	99	82.967	Mesocricetus_auratus
MGP_SPRETEiJ_G0030975	-	99	79.167	ENSMICG00000027508	ISG20	100	77.778	Microcebus_murinus
MGP_SPRETEiJ_G0030975	-	99	79.330	ENSMOCG00000005940	-	100	79.330	Microtus_ochrogaster
MGP_SPRETEiJ_G0030975	-	94	46.377	ENSMMOG00000019013	isg20	77	56.000	Mola_mola
MGP_SPRETEiJ_G0030975	-	96	64.029	ENSMODG00000019583	ISG20	93	65.854	Monodelphis_domestica
MGP_SPRETEiJ_G0030975	-	100	98.895	MGP_CAROLIEiJ_G0029873	-	100	98.895	Mus_caroli
MGP_SPRETEiJ_G0030975	-	100	99.448	ENSMUSG00000039236	Isg20	100	99.448	Mus_musculus
MGP_SPRETEiJ_G0030975	-	100	97.241	MGP_PahariEiJ_G0013095	-	100	97.241	Mus_pahari
MGP_SPRETEiJ_G0030975	-	99	63.636	ENSMPUG00000015816	ISG20	100	65.497	Mustela_putorius_furo
MGP_SPRETEiJ_G0030975	-	99	86.806	ENSNGAG00000019782	-	99	86.857	Nannospalax_galili
MGP_SPRETEiJ_G0030975	-	91	79.268	ENSNLEG00000033379	ISG20	100	79.268	Nomascus_leucogenys
MGP_SPRETEiJ_G0030975	-	99	74.306	ENSODEG00000015032	ISG20	97	73.143	Octodon_degus
MGP_SPRETEiJ_G0030975	-	97	46.099	ENSONIG00000001534	isg20l2	89	48.171	Oreochromis_niloticus
MGP_SPRETEiJ_G0030975	-	99	63.889	ENSOANG00000006380	ISG20	79	63.448	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0030975	-	99	76.389	ENSOCUG00000023346	ISG20	100	75.138	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0030975	-	95	49.640	ENSORLG00000029585	isg20	81	49.704	Oryzias_latipes
MGP_SPRETEiJ_G0030975	-	95	50.360	ENSORLG00015016089	isg20	71	50.296	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0030975	-	95	48.921	ENSOMEG00000003990	isg20	95	49.112	Oryzias_melastigma
MGP_SPRETEiJ_G0030975	-	99	80.556	ENSOGAG00000004742	ISG20	100	78.947	Otolemur_garnettii
MGP_SPRETEiJ_G0030975	-	96	60.345	ENSOARG00000010964	ISG20	95	60.345	Ovis_aries
MGP_SPRETEiJ_G0030975	-	99	83.217	ENSPPAG00000028868	ISG20	100	80.110	Pan_paniscus
MGP_SPRETEiJ_G0030975	-	99	72.222	ENSPPRG00000023560	ISG20	100	72.515	Panthera_pardus
MGP_SPRETEiJ_G0030975	-	92	75.940	ENSPTIG00000018498	ISG20	71	73.913	Panthera_tigris_altaica
MGP_SPRETEiJ_G0030975	-	99	83.333	ENSPTRG00000044668	ISG20	100	81.215	Pan_troglodytes
MGP_SPRETEiJ_G0030975	-	99	81.250	ENSPANG00000034658	ISG20	100	79.006	Papio_anubis
MGP_SPRETEiJ_G0030975	-	99	44.521	ENSPMGG00000021232	isg20	78	49.057	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0030975	-	99	86.806	ENSPEMG00000020302	-	99	84.066	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0030975	-	93	47.794	ENSPMAG00000000577	isg20	87	47.170	Petromyzon_marinus
MGP_SPRETEiJ_G0030975	-	99	46.897	ENSPMAG00000001569	ISG20	90	48.485	Petromyzon_marinus
MGP_SPRETEiJ_G0030975	-	96	62.590	ENSPCIG00000006405	ISG20	89	63.855	Phascolarctos_cinereus
MGP_SPRETEiJ_G0030975	-	94	52.174	ENSPLAG00000005932	isg20	78	51.948	Poecilia_latipinna
MGP_SPRETEiJ_G0030975	-	94	52.174	ENSPMEG00000016899	isg20	72	53.416	Poecilia_mexicana
MGP_SPRETEiJ_G0030975	-	86	51.200	ENSPREG00000005954	isg20	64	51.429	Poecilia_reticulata
MGP_SPRETEiJ_G0030975	-	99	82.639	ENSPPYG00000006756	ISG20	100	80.663	Pongo_abelii
MGP_SPRETEiJ_G0030975	-	99	77.778	ENSPCOG00000015727	ISG20	97	77.515	Propithecus_coquereli
MGP_SPRETEiJ_G0030975	-	99	89.130	ENSRNOG00000054561	Isg20	99	91.813	Rattus_norvegicus
MGP_SPRETEiJ_G0030975	-	99	81.944	ENSRBIG00000041506	ISG20	100	80.110	Rhinopithecus_bieti
MGP_SPRETEiJ_G0030975	-	99	81.944	ENSRROG00000043326	ISG20	100	80.110	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0030975	-	99	80.556	ENSSBOG00000031539	ISG20	100	77.348	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0030975	-	96	64.029	ENSSHAG00000017049	ISG20	97	64.458	Sarcophilus_harrisii
MGP_SPRETEiJ_G0030975	-	94	48.551	ENSSMAG00000004520	isg20	50	50.314	Scophthalmus_maximus
MGP_SPRETEiJ_G0030975	-	99	61.111	ENSSPUG00000012061	ISG20	97	61.078	Sphenodon_punctatus
MGP_SPRETEiJ_G0030975	-	99	75.000	ENSSSCG00000024867	ISG20	100	73.099	Sus_scrofa
MGP_SPRETEiJ_G0030975	-	98	46.528	ENSTRUG00000021768	isg20l2	51	49.697	Takifugu_rubripes
MGP_SPRETEiJ_G0030975	-	90	51.145	ENSTNIG00000010389	isg20	75	51.974	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0030975	-	99	70.629	ENSUAMG00000019065	ISG20	97	70.833	Ursus_americanus
MGP_SPRETEiJ_G0030975	-	99	72.222	ENSVVUG00000012013	ISG20	100	71.930	Vulpes_vulpes
MGP_SPRETEiJ_G0030975	-	94	51.825	ENSXETG00000007588	aen	62	52.532	Xenopus_tropicalis
MGP_SPRETEiJ_G0030975	-	94	50.725	ENSXMAG00000013066	isg20	51	52.174	Xiphophorus_maculatus