EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0031009 (Gene tree)
Gene ID: -
Gene Symbol: Blm
Alias: -
Full Name: Bloom syndrome%2C RecQ like helicase
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 81334 bases
Position: chr7:68687604-68768937
Accession: 1328362
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0083742	HRDC	PF00570.23	1.9e-11	1	1
MGP_SPRETEiJ_P0083743	HRDC	PF00570.23	1.9e-11	1	1
MGP_SPRETEiJ_P0083743	BDHCT	PF08072.11	6e-22	1	1
MGP_SPRETEiJ_P0083742	BDHCT	PF08072.11	6e-22	1	1
MGP_SPRETEiJ_P0083743	DEAD	PF00270.29	1e-19	1	1
MGP_SPRETEiJ_P0083742	DEAD	PF00270.29	1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0083747	-	466	-	MGP_SPRETEiJ_P0083747	50 (aa)	-	-
MGP_SPRETEiJ_T0083746	-	387	-	MGP_SPRETEiJ_P0083746	41 (aa)	-	-
MGP_SPRETEiJ_T0083745	-	488	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0083744	-	540	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0083743	-	4766	-	MGP_SPRETEiJ_P0083743	1416 (aa)	-	-
MGP_SPRETEiJ_T0083742	-	4589	-	MGP_SPRETEiJ_P0083742	1413 (aa)	-	-
MGP_SPRETEiJ_T0083741	-	1372	-	MGP_SPRETEiJ_P0083741	182 (aa)	-	-
MGP_SPRETEiJ_T0083749	-	2524	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0083748	-	3563	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0083750	-	743	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0031009's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0031009's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0031009	Blm	100	75.806	ENSG00000197299	BLM	100	76.367	Homo_sapiens
MGP_SPRETEiJ_G0031009	Blm	59	61.183	ENSAPOG00000017966	blm	62	61.747	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0031009	Blm	100	74.860	ENSAMEG00000013843	BLM	100	75.070	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0031009	Blm	59	62.293	ENSACIG00000023762	blm	60	62.574	Amphilophus_citrinellus
MGP_SPRETEiJ_G0031009	Blm	67	61.629	ENSAOCG00000003318	blm	87	62.191	Amphiprion_ocellaris
MGP_SPRETEiJ_G0031009	Blm	67	61.747	ENSAPEG00000018105	blm	87	61.955	Amphiprion_percula
MGP_SPRETEiJ_G0031009	Blm	84	66.709	ENSATEG00000006421	blm	85	66.455	Anabas_testudineus
MGP_SPRETEiJ_G0031009	Blm	79	57.275	ENSAPLG00000006878	BLM	97	56.419	Anas_platyrhynchos
MGP_SPRETEiJ_G0031009	Blm	58	69.797	ENSACAG00000014275	BLM	84	69.797	Anolis_carolinensis
MGP_SPRETEiJ_G0031009	Blm	100	74.614	ENSANAG00000038415	BLM	100	75.456	Aotus_nancymaae
MGP_SPRETEiJ_G0031009	Blm	88	62.194	ENSACLG00000020354	blm	86	62.780	Astatotilapia_calliptera
MGP_SPRETEiJ_G0031009	Blm	84	65.290	ENSAMXG00000016970	blm	88	61.988	Astyanax_mexicanus
MGP_SPRETEiJ_G0031009	Blm	93	77.961	ENSBTAG00000020301	BLM	100	78.618	Bos_taurus
MGP_SPRETEiJ_G0031009	Blm	100	74.755	ENSCJAG00000009803	BLM	100	75.105	Callithrix_jacchus
MGP_SPRETEiJ_G0031009	Blm	100	74.526	ENSCAFG00000012385	BLM	100	73.688	Canis_familiaris
MGP_SPRETEiJ_G0031009	Blm	100	74.456	ENSCAFG00020016111	BLM	92	88.556	Canis_lupus_dingo
MGP_SPRETEiJ_G0031009	Blm	100	74.492	ENSCHIG00000010329	BLM	100	77.632	Capra_hircus
MGP_SPRETEiJ_G0031009	Blm	100	75.683	ENSTSYG00000012368	BLM	100	76.174	Carlito_syrichta
MGP_SPRETEiJ_G0031009	Blm	86	82.997	ENSCAPG00000017976	BLM	98	82.277	Cavia_aperea
MGP_SPRETEiJ_G0031009	Blm	100	74.090	ENSCPOG00000001761	BLM	100	73.743	Cavia_porcellus
MGP_SPRETEiJ_G0031009	Blm	100	73.684	ENSCCAG00000023069	BLM	100	74.526	Cebus_capucinus
MGP_SPRETEiJ_G0031009	Blm	100	75.596	ENSCATG00000040609	BLM	92	91.914	Cercocebus_atys
MGP_SPRETEiJ_G0031009	Blm	100	75.263	ENSCLAG00000012111	BLM	100	75.333	Chinchilla_lanigera
MGP_SPRETEiJ_G0031009	Blm	100	75.035	ENSCSAG00000017040	BLM	100	75.802	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0031009	Blm	91	73.263	ENSCHOG00000006255	BLM	93	73.263	Choloepus_hoffmanni
MGP_SPRETEiJ_G0031009	Blm	83	56.796	ENSCPBG00000025000	BLM	88	73.296	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0031009	Blm	89	65.924	ENSCANG00000034808	BLM	100	66.640	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0031009	Blm	100	84.615	ENSCGRG00001024897	Blm	100	84.648	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0031009	Blm	68	80.938	ENSCGRG00000016261	Blm	97	81.250	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0031009	Blm	55	64.623	ENSCSEG00000013483	blm	60	64.789	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0031009	Blm	99	46.312	ENSDARG00000077089	blm	74	79.512	Danio_rerio
MGP_SPRETEiJ_G0031009	Blm	99	72.137	ENSDNOG00000010159	BLM	99	72.207	Dasypus_novemcinctus
MGP_SPRETEiJ_G0031009	Blm	73	79.981	ENSDORG00000011033	Blm	100	80.345	Dipodomys_ordii
MGP_SPRETEiJ_G0031009	Blm	58	39.461	FBgn0002906	Blm	51	41.688	Drosophila_melanogaster
MGP_SPRETEiJ_G0031009	Blm	79	80.000	ENSETEG00000015019	BLM	82	80.000	Echinops_telfairi
MGP_SPRETEiJ_G0031009	Blm	100	73.436	ENSEASG00005006727	BLM	100	73.581	Equus_asinus_asinus
MGP_SPRETEiJ_G0031009	Blm	100	75.069	ENSECAG00000011405	BLM	100	75.417	Equus_caballus
MGP_SPRETEiJ_G0031009	Blm	98	69.993	ENSEEUG00000001434	BLM	98	69.562	Erinaceus_europaeus
MGP_SPRETEiJ_G0031009	Blm	84	66.498	ENSELUG00000019098	blm	83	66.498	Esox_lucius
MGP_SPRETEiJ_G0031009	Blm	100	72.899	ENSFCAG00000006087	BLM	100	73.179	Felis_catus
MGP_SPRETEiJ_G0031009	Blm	75	57.534	ENSFALG00000010981	BLM	86	66.989	Ficedula_albicollis
MGP_SPRETEiJ_G0031009	Blm	100	68.719	ENSFDAG00000012658	BLM	100	70.749	Fukomys_damarensis
MGP_SPRETEiJ_G0031009	Blm	55	65.013	ENSFHEG00000002553	blm	57	65.013	Fundulus_heteroclitus
MGP_SPRETEiJ_G0031009	Blm	87	62.404	ENSGMOG00000016431	blm	90	60.870	Gadus_morhua
MGP_SPRETEiJ_G0031009	Blm	99	50.102	ENSGALG00000008256	BLM	87	67.366	Gallus_gallus
MGP_SPRETEiJ_G0031009	Blm	55	65.508	ENSGAFG00000001117	blm	59	65.508	Gambusia_affinis
MGP_SPRETEiJ_G0031009	Blm	80	50.720	ENSGACG00000010863	blm	100	73.004	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0031009	Blm	89	51.766	ENSGAGG00000005383	BLM	82	76.613	Gopherus_agassizii
MGP_SPRETEiJ_G0031009	Blm	100	75.456	ENSGGOG00000007710	BLM	92	92.453	Gorilla_gorilla
MGP_SPRETEiJ_G0031009	Blm	59	62.310	ENSHBUG00000015943	blm	60	62.824	Haplochromis_burtoni
MGP_SPRETEiJ_G0031009	Blm	100	75.772	ENSHGLG00000013231	BLM	99	76.194	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0031009	Blm	73	54.676	ENSHCOG00000011455	blm	83	61.859	Hippocampus_comes
MGP_SPRETEiJ_G0031009	Blm	74	54.820	ENSIPUG00000000529	blm	68	65.982	Ictalurus_punctatus
MGP_SPRETEiJ_G0031009	Blm	100	76.244	ENSSTOG00000005000	BLM	100	76.557	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0031009	Blm	66	86.888	ENSJJAG00000016322	Blm	94	87.046	Jaculus_jaculus
MGP_SPRETEiJ_G0031009	Blm	59	66.197	ENSKMAG00000016608	blm	56	66.581	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0031009	Blm	88	67.409	ENSLACG00000006490	BLM	88	67.292	Latimeria_chalumnae
MGP_SPRETEiJ_G0031009	Blm	88	62.766	ENSLOCG00000014302	blm	87	62.676	Lepisosteus_oculatus
MGP_SPRETEiJ_G0031009	Blm	100	75.456	ENSMFAG00000042982	BLM	92	92.183	Macaca_fascicularis
MGP_SPRETEiJ_G0031009	Blm	100	75.456	ENSMMUG00000019526	BLM	92	92.183	Macaca_mulatta
MGP_SPRETEiJ_G0031009	Blm	98	74.228	ENSMNEG00000031251	BLM	92	91.914	Macaca_nemestrina
MGP_SPRETEiJ_G0031009	Blm	100	73.072	ENSMLEG00000032934	BLM	100	73.282	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0031009	Blm	59	63.529	ENSMAMG00000008726	blm	61	63.967	Mastacembelus_armatus
MGP_SPRETEiJ_G0031009	Blm	89	62.648	ENSMZEG00005022323	blm	88	62.692	Maylandia_zebra
MGP_SPRETEiJ_G0031009	Blm	100	84.669	ENSMAUG00000008953	Blm	99	84.669	Mesocricetus_auratus
MGP_SPRETEiJ_G0031009	Blm	100	76.034	ENSMICG00000034442	BLM	100	75.806	Microcebus_murinus
MGP_SPRETEiJ_G0031009	Blm	100	83.216	ENSMOCG00000016367	Blm	100	83.145	Microtus_ochrogaster
MGP_SPRETEiJ_G0031009	Blm	99	60.870	ENSMODG00000019449	BLM	99	61.153	Monodelphis_domestica
MGP_SPRETEiJ_G0031009	Blm	67	64.158	ENSMALG00000007323	blm	87	64.158	Monopterus_albus
MGP_SPRETEiJ_G0031009	Blm	100	96.116	MGP_CAROLIEiJ_G0029907	Blm	100	96.116	Mus_caroli
MGP_SPRETEiJ_G0031009	Blm	100	98.239	ENSMUSG00000030528	Blm	100	98.239	Mus_musculus
MGP_SPRETEiJ_G0031009	Blm	100	94.904	MGP_PahariEiJ_G0013129	Blm	100	94.904	Mus_pahari
MGP_SPRETEiJ_G0031009	Blm	84	72.675	ENSMPUG00000015657	BLM	99	73.251	Mustela_putorius_furo
MGP_SPRETEiJ_G0031009	Blm	100	73.754	ENSMLUG00000014697	BLM	100	73.703	Myotis_lucifugus
MGP_SPRETEiJ_G0031009	Blm	100	80.905	ENSNGAG00000001275	Blm	100	80.905	Nannospalax_galili
MGP_SPRETEiJ_G0031009	Blm	59	62.648	ENSNBRG00000019702	blm	60	62.810	Neolamprologus_brichardi
MGP_SPRETEiJ_G0031009	Blm	100	74.264	ENSNLEG00000012087	BLM	100	79.924	Nomascus_leucogenys
MGP_SPRETEiJ_G0031009	Blm	99	58.491	ENSMEUG00000007253	BLM	99	58.421	Notamacropus_eugenii
MGP_SPRETEiJ_G0031009	Blm	95	85.359	ENSOPRG00000011667	BLM	95	85.083	Ochotona_princeps
MGP_SPRETEiJ_G0031009	Blm	73	76.628	ENSODEG00000015373	BLM	100	76.724	Octodon_degus
MGP_SPRETEiJ_G0031009	Blm	88	62.368	ENSONIG00000015193	blm	89	62.720	Oreochromis_niloticus
MGP_SPRETEiJ_G0031009	Blm	53	80.624	ENSOANG00000009316	-	99	80.181	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0031009	Blm	99	70.839	ENSOCUG00000013969	BLM	99	70.420	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0031009	Blm	74	63.290	ENSORLG00000008110	blm	60	63.475	Oryzias_latipes
MGP_SPRETEiJ_G0031009	Blm	74	63.528	ENSORLG00020004812	blm	88	63.475	Oryzias_latipes_hni
MGP_SPRETEiJ_G0031009	Blm	74	63.377	ENSORLG00015018640	blm	78	65.854	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0031009	Blm	69	62.726	ENSOMEG00000023545	blm	87	62.963	Oryzias_melastigma
MGP_SPRETEiJ_G0031009	Blm	100	71.449	ENSOGAG00000005708	BLM	100	71.289	Otolemur_garnettii
MGP_SPRETEiJ_G0031009	Blm	100	73.889	ENSOARG00000012875	BLM	100	73.889	Ovis_aries
MGP_SPRETEiJ_G0031009	Blm	100	75.877	ENSPPAG00000032173	BLM	100	76.438	Pan_paniscus
MGP_SPRETEiJ_G0031009	Blm	100	73.249	ENSPPRG00000002471	BLM	100	73.529	Panthera_pardus
MGP_SPRETEiJ_G0031009	Blm	100	72.867	ENSPTIG00000016168	BLM	100	73.147	Panthera_tigris_altaica
MGP_SPRETEiJ_G0031009	Blm	100	75.526	ENSPTRG00000007460	BLM	100	76.087	Pan_troglodytes
MGP_SPRETEiJ_G0031009	Blm	100	75.666	ENSPANG00000018572	BLM	92	92.183	Papio_anubis
MGP_SPRETEiJ_G0031009	Blm	67	62.559	ENSPKIG00000008954	blm	66	62.588	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0031009	Blm	50	67.503	ENSPMGG00000006629	blm	80	66.759	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0031009	Blm	100	84.192	ENSPEMG00000017348	Blm	100	84.121	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0031009	Blm	50	59.270	ENSPMAG00000000445	blm	96	59.410	Petromyzon_marinus
MGP_SPRETEiJ_G0031009	Blm	99	59.623	ENSPCIG00000006609	BLM	99	60.407	Phascolarctos_cinereus
MGP_SPRETEiJ_G0031009	Blm	58	62.591	ENSPFOG00000005059	blm	99	47.310	Poecilia_formosa
MGP_SPRETEiJ_G0031009	Blm	55	65.419	ENSPLAG00000017344	blm	56	65.419	Poecilia_latipinna
MGP_SPRETEiJ_G0031009	Blm	55	65.419	ENSPMEG00000000321	blm	56	65.419	Poecilia_mexicana
MGP_SPRETEiJ_G0031009	Blm	55	65.290	ENSPREG00000007715	blm	56	65.290	Poecilia_reticulata
MGP_SPRETEiJ_G0031009	Blm	100	74.126	ENSPPYG00000006784	BLM	100	74.685	Pongo_abelii
MGP_SPRETEiJ_G0031009	Blm	72	83.871	ENSPCAG00000008960	BLM	73	83.871	Procavia_capensis
MGP_SPRETEiJ_G0031009	Blm	100	70.498	ENSPCOG00000000439	BLM	100	71.257	Propithecus_coquereli
MGP_SPRETEiJ_G0031009	Blm	80	94.212	ENSPVAG00000011642	BLM	83	94.212	Pteropus_vampyrus
MGP_SPRETEiJ_G0031009	Blm	59	51.064	ENSPNYG00000010956	blm	57	51.476	Pundamilia_nyererei
MGP_SPRETEiJ_G0031009	Blm	62	64.226	ENSPNAG00000011714	blm	68	63.981	Pygocentrus_nattereri
MGP_SPRETEiJ_G0031009	Blm	100	88.472	ENSRNOG00000011213	Blm	100	88.402	Rattus_norvegicus
MGP_SPRETEiJ_G0031009	Blm	100	74.123	ENSRBIG00000029656	BLM	100	83.046	Rhinopithecus_bieti
MGP_SPRETEiJ_G0031009	Blm	100	75.105	ENSRROG00000037871	BLM	92	90.836	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0031009	Blm	91	73.852	ENSSBOG00000030957	BLM	100	74.205	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0031009	Blm	99	60.912	ENSSHAG00000007988	BLM	99	61.050	Sarcophilus_harrisii
MGP_SPRETEiJ_G0031009	Blm	54	65.096	ENSSFOG00015015462	blm	63	64.841	Scleropages_formosus
MGP_SPRETEiJ_G0031009	Blm	59	61.584	ENSSMAG00000001120	blm	60	61.960	Scophthalmus_maximus
MGP_SPRETEiJ_G0031009	Blm	88	63.290	ENSSDUG00000010955	blm	87	62.884	Seriola_dumerili
MGP_SPRETEiJ_G0031009	Blm	59	63.033	ENSSLDG00000000634	blm	59	63.090	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0031009	Blm	93	66.041	ENSSARG00000006398	BLM	99	65.740	Sorex_araneus
MGP_SPRETEiJ_G0031009	Blm	74	59.354	ENSSPUG00000000013	BLM	96	56.372	Sphenodon_punctatus
MGP_SPRETEiJ_G0031009	Blm	100	46.911	ENSSPAG00000013999	blm	100	46.572	Stegastes_partitus
MGP_SPRETEiJ_G0031009	Blm	100	74.582	ENSSSCG00000001816	BLM	99	74.619	Sus_scrofa
MGP_SPRETEiJ_G0031009	Blm	79	50.257	ENSTGUG00000009959	-	99	50.430	Taeniopygia_guttata
MGP_SPRETEiJ_G0031009	Blm	75	61.705	ENSTRUG00000019860	blm	88	62.335	Takifugu_rubripes
MGP_SPRETEiJ_G0031009	Blm	55	64.132	ENSTNIG00000019246	blm	58	64.076	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0031009	Blm	79	78.897	ENSTBEG00000006706	BLM	81	78.897	Tupaia_belangeri
MGP_SPRETEiJ_G0031009	Blm	100	74.965	ENSTTRG00000016386	BLM	100	74.965	Tursiops_truncatus
MGP_SPRETEiJ_G0031009	Blm	100	75.456	ENSUMAG00000009105	BLM	97	88.799	Ursus_maritimus
MGP_SPRETEiJ_G0031009	Blm	99	72.612	ENSVPAG00000000085	BLM	99	73.053	Vicugna_pacos
MGP_SPRETEiJ_G0031009	Blm	95	86.538	ENSVVUG00000006402	BLM	99	86.202	Vulpes_vulpes
MGP_SPRETEiJ_G0031009	Blm	55	61.647	ENSXCOG00000020227	blm	55	62.033	Xiphophorus_couchianus
MGP_SPRETEiJ_G0031009	Blm	55	64.994	ENSXMAG00000002951	blm	56	65.380	Xiphophorus_maculatus