EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0031538 (Gene tree)
Gene ID: -
Gene Symbol: Rbbp6
Alias: 4933422O15Rik|C030034J04Rik
Full Name: retinoblastoma binding protein 6%2C ubiquitin ligase
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 32732 bases
Position: chr7:112721192-112753923
Accession: 894835
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0085387	zf-CCHC_2	PF13696.6	6.6e-09	1	1
MGP_SPRETEiJ_P0085384	zf-CCHC_2	PF13696.6	6.8e-09	1	1
MGP_SPRETEiJ_P0085382	zf-CCHC_2	PF13696.6	7e-09	1	1
MGP_SPRETEiJ_P0085387	zf-CCHC	PF00098.23	9.2e-05	1	1
MGP_SPRETEiJ_P0085384	zf-CCHC	PF00098.23	0.0001	1	1
MGP_SPRETEiJ_P0085382	zf-CCHC	PF00098.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0085389	-	542	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0085388	-	693	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0085383	-	6348	-	MGP_SPRETEiJ_P0085383	123 (aa)	-	UPI00000281EB
MGP_SPRETEiJ_T0085382	-	6179	-	MGP_SPRETEiJ_P0085382	1788 (aa)	-	-
MGP_SPRETEiJ_T0085385	-	582	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0085384	-	5722	-	MGP_SPRETEiJ_P0085384	1754 (aa)	-	-
MGP_SPRETEiJ_T0085387	-	5533	-	MGP_SPRETEiJ_P0085387	1705 (aa)	-	-
MGP_SPRETEiJ_T0085386	-	810	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0031538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0031538's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0031538	Rbbp6	94	88.364	ENSG00000122257	RBBP6	100	98.007	Homo_sapiens
MGP_SPRETEiJ_G0031538	Rbbp6	94	86.808	ENSAMEG00000009312	RBBP6	94	86.808	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0031538	Rbbp6	93	70.807	ENSAPLG00000009569	RBBP6	96	72.083	Anas_platyrhynchos
MGP_SPRETEiJ_G0031538	Rbbp6	94	88.187	ENSANAG00000037384	RBBP6	89	93.303	Aotus_nancymaae
MGP_SPRETEiJ_G0031538	Rbbp6	94	87.087	ENSBTAG00000009441	RBBP6	61	82.925	Bos_taurus
MGP_SPRETEiJ_G0031538	Rbbp6	94	87.419	ENSCJAG00000020661	RBBP6	89	93.303	Callithrix_jacchus
MGP_SPRETEiJ_G0031538	Rbbp6	96	87.108	ENSCAFG00000017566	RBBP6	98	86.887	Canis_familiaris
MGP_SPRETEiJ_G0031538	Rbbp6	94	87.500	ENSCHIG00000013732	RBBP6	62	82.380	Capra_hircus
MGP_SPRETEiJ_G0031538	Rbbp6	94	88.863	ENSTSYG00000000822	RBBP6	89	96.305	Carlito_syrichta
MGP_SPRETEiJ_G0031538	Rbbp6	88	83.226	ENSCAPG00000012399	RBBP6	93	83.029	Cavia_aperea
MGP_SPRETEiJ_G0031538	Rbbp6	94	86.655	ENSCPOG00000040025	RBBP6	94	86.517	Cavia_porcellus
MGP_SPRETEiJ_G0031538	Rbbp6	94	88.069	ENSCCAG00000023229	RBBP6	89	96.536	Cebus_capucinus
MGP_SPRETEiJ_G0031538	Rbbp6	94	87.950	ENSCATG00000033601	RBBP6	89	96.536	Cercocebus_atys
MGP_SPRETEiJ_G0031538	Rbbp6	94	86.833	ENSCLAG00000009872	RBBP6	94	86.694	Chinchilla_lanigera
MGP_SPRETEiJ_G0031538	Rbbp6	94	87.950	ENSCSAG00000006609	RBBP6	94	87.995	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0031538	Rbbp6	63	96.012	ENSCHOG00000000278	RBBP6	63	95.994	Choloepus_hoffmanni
MGP_SPRETEiJ_G0031538	Rbbp6	94	74.015	ENSCPBG00000001818	RBBP6	94	79.502	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0031538	Rbbp6	94	87.950	ENSCANG00000039613	RBBP6	89	97.229	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0031538	Rbbp6	94	93.905	ENSCGRG00001017193	Rbbp6	94	93.905	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0031538	Rbbp6	94	93.905	ENSCGRG00000011887	Rbbp6	94	93.905	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0031538	Rbbp6	94	87.825	ENSDNOG00000048802	RBBP6	94	87.825	Dasypus_novemcinctus
MGP_SPRETEiJ_G0031538	Rbbp6	96	86.403	ENSDORG00000010285	Rbbp6	96	86.600	Dipodomys_ordii
MGP_SPRETEiJ_G0031538	Rbbp6	94	88.566	ENSFCAG00000043694	RBBP6	89	95.381	Felis_catus
MGP_SPRETEiJ_G0031538	Rbbp6	93	70.799	ENSFALG00000003750	RBBP6	94	71.206	Ficedula_albicollis
MGP_SPRETEiJ_G0031538	Rbbp6	94	86.671	ENSFDAG00000013132	RBBP6	94	86.710	Fukomys_damarensis
MGP_SPRETEiJ_G0031538	Rbbp6	97	73.333	ENSGALG00000006043	RBBP6	83	79.848	Gallus_gallus
MGP_SPRETEiJ_G0031538	Rbbp6	88	79.885	ENSGAGG00000004371	RBBP6	94	80.077	Gopherus_agassizii
MGP_SPRETEiJ_G0031538	Rbbp6	94	88.069	ENSGGOG00000007137	RBBP6	89	96.305	Gorilla_gorilla
MGP_SPRETEiJ_G0031538	Rbbp6	94	86.121	ENSHGLG00000008327	RBBP6	94	85.985	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0031538	Rbbp6	95	82.246	ENSHGLG00100007773	RBBP6	82	89.022	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0031538	Rbbp6	94	86.543	ENSSTOG00000016006	RBBP6	94	88.350	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0031538	Rbbp6	94	87.278	ENSJJAG00000014549	Rbbp6	94	87.293	Jaculus_jaculus
MGP_SPRETEiJ_G0031538	Rbbp6	93	61.307	ENSLACG00000012333	RBBP6	64	57.168	Latimeria_chalumnae
MGP_SPRETEiJ_G0031538	Rbbp6	92	51.076	ENSLOCG00000005487	RBBP6	95	53.846	Lepisosteus_oculatus
MGP_SPRETEiJ_G0031538	Rbbp6	94	87.234	ENSLAFG00000009528	RBBP6	94	87.234	Loxodonta_africana
MGP_SPRETEiJ_G0031538	Rbbp6	94	87.950	ENSMFAG00000038627	RBBP6	89	96.767	Macaca_fascicularis
MGP_SPRETEiJ_G0031538	Rbbp6	96	86.523	ENSMMUG00000015908	RBBP6	89	96.767	Macaca_mulatta
MGP_SPRETEiJ_G0031538	Rbbp6	94	88.069	ENSMNEG00000033630	RBBP6	89	96.767	Macaca_nemestrina
MGP_SPRETEiJ_G0031538	Rbbp6	94	88.009	ENSMLEG00000030073	RBBP6	89	96.767	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0031538	Rbbp6	95	71.048	ENSMGAG00000006423	RBBP6	94	72.212	Meleagris_gallopavo
MGP_SPRETEiJ_G0031538	Rbbp6	94	88.685	ENSMICG00000008059	RBBP6	89	96.536	Microcebus_murinus
MGP_SPRETEiJ_G0031538	Rbbp6	94	76.099	ENSMODG00000016318	-	94	76.099	Monodelphis_domestica
MGP_SPRETEiJ_G0031538	Rbbp6	75	98.901	MGP_CAROLIEiJ_G0030424	-	100	99.481	Mus_caroli
MGP_SPRETEiJ_G0031538	Rbbp6	100	99.218	ENSMUSG00000030779	Rbbp6	100	99.218	Mus_musculus
MGP_SPRETEiJ_G0031538	Rbbp6	100	96.203	MGP_PahariEiJ_G0013634	Rbbp6	100	96.203	Mus_pahari
MGP_SPRETEiJ_G0031538	Rbbp6	94	85.757	ENSMLUG00000010601	-	94	85.757	Myotis_lucifugus
MGP_SPRETEiJ_G0031538	Rbbp6	63	87.523	ENSNGAG00000002381	Rbbp6	62	87.067	Nannospalax_galili
MGP_SPRETEiJ_G0031538	Rbbp6	88	95.892	ENSNLEG00000011896	RBBP6	89	96.305	Nomascus_leucogenys
MGP_SPRETEiJ_G0031538	Rbbp6	88	78.162	ENSMEUG00000014491	RBBP6	88	78.162	Notamacropus_eugenii
MGP_SPRETEiJ_G0031538	Rbbp6	58	98.870	ENSOPRG00000016272	RBBP6	59	98.830	Ochotona_princeps
MGP_SPRETEiJ_G0031538	Rbbp6	94	83.971	ENSODEG00000012319	RBBP6	94	84.064	Octodon_degus
MGP_SPRETEiJ_G0031538	Rbbp6	94	74.957	ENSOANG00000007673	RBBP6	94	75.471	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0031538	Rbbp6	96	88.769	ENSOCUG00000004346	RBBP6	99	83.097	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0031538	Rbbp6	94	88.361	ENSOGAG00000026986	RBBP6	94	88.121	Otolemur_garnettii
MGP_SPRETEiJ_G0031538	Rbbp6	94	85.689	ENSOARG00000017741	RBBP6	61	82.289	Ovis_aries
MGP_SPRETEiJ_G0031538	Rbbp6	94	86.533	ENSPPAG00000023595	RBBP6	94	86.576	Pan_paniscus
MGP_SPRETEiJ_G0031538	Rbbp6	94	88.507	ENSPPRG00000004074	RBBP6	89	95.150	Panthera_pardus
MGP_SPRETEiJ_G0031538	Rbbp6	94	88.507	ENSPTIG00000010342	RBBP6	89	95.150	Panthera_tigris_altaica
MGP_SPRETEiJ_G0031538	Rbbp6	94	88.305	ENSPTRG00000007897	RBBP6	89	96.536	Pan_troglodytes
MGP_SPRETEiJ_G0031538	Rbbp6	94	88.128	ENSPANG00000019625	RBBP6	89	96.998	Papio_anubis
MGP_SPRETEiJ_G0031538	Rbbp6	94	79.228	ENSPCIG00000014000	RBBP6	94	79.181	Phascolarctos_cinereus
MGP_SPRETEiJ_G0031538	Rbbp6	94	87.703	ENSPPYG00000007201	RBBP6	94	87.749	Pongo_abelii
MGP_SPRETEiJ_G0031538	Rbbp6	94	88.685	ENSPCOG00000021939	RBBP6	89	96.305	Propithecus_coquereli
MGP_SPRETEiJ_G0031538	Rbbp6	63	91.289	ENSPVAG00000001110	RBBP6	82	89.409	Pteropus_vampyrus
MGP_SPRETEiJ_G0031538	Rbbp6	100	95.201	ENSRNOG00000012806	Rbbp6	100	95.592	Rattus_norvegicus
MGP_SPRETEiJ_G0031538	Rbbp6	94	89.524	ENSRBIG00000004517	RBBP6	95	90.649	Rhinopithecus_bieti
MGP_SPRETEiJ_G0031538	Rbbp6	94	87.950	ENSRROG00000032092	RBBP6	89	96.767	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0031538	Rbbp6	94	87.596	ENSSBOG00000021666	RBBP6	89	93.303	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0031538	Rbbp6	94	80.295	ENSSHAG00000004727	-	94	80.248	Sarcophilus_harrisii
MGP_SPRETEiJ_G0031538	Rbbp6	86	95.179	ENSSARG00000004977	RBBP6	94	83.644	Sorex_araneus
MGP_SPRETEiJ_G0031538	Rbbp6	94	87.891	ENSSSCG00000007830	RBBP6	94	88.092	Sus_scrofa
MGP_SPRETEiJ_G0031538	Rbbp6	95	70.606	ENSTGUG00000006185	RBBP6	94	71.696	Taeniopygia_guttata
MGP_SPRETEiJ_G0031538	Rbbp6	94	85.697	ENSTTRG00000002696	RBBP6	94	85.655	Tursiops_truncatus
MGP_SPRETEiJ_G0031538	Rbbp6	94	87.183	ENSUMAG00000008537	RBBP6	94	87.183	Ursus_maritimus
MGP_SPRETEiJ_G0031538	Rbbp6	67	91.269	ENSVPAG00000006458	RBBP6	79	91.584	Vicugna_pacos
MGP_SPRETEiJ_G0031538	Rbbp6	94	88.423	ENSVVUG00000005484	RBBP6	94	88.423	Vulpes_vulpes