EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0031562 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 3400 bases
Position: chr7:116364513-116367912
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0085536	GTP_EFTU	PF00009.27	2.8e-54	1	1
MGP_SPRETEiJ_P0085534	GTP_EFTU	PF00009.27	3e-54	1	1
MGP_SPRETEiJ_P0085534	GTP_EFTU_D2	PF03144.25	3e-15	1	1
MGP_SPRETEiJ_P0085536	GTP_EFTU_D2	PF03144.25	3.9e-15	1	1
MGP_SPRETEiJ_P0085539	GTP_EFTU_D2	PF03144.25	1.2e-11	1	1
MGP_SPRETEiJ_P0085534	GTP_EFTU_D3	PF03143.17	2.7e-22	1	1
MGP_SPRETEiJ_P0085539	GTP_EFTU_D3	PF03143.17	4.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0085538	-	320	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0085539	-	682	-	MGP_SPRETEiJ_P0085539	116 (aa)	-	-
MGP_SPRETEiJ_T0085536	-	1754	-	MGP_SPRETEiJ_P0085536	435 (aa)	-	-
MGP_SPRETEiJ_T0085537	-	369	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0085534	-	1677	-	MGP_SPRETEiJ_P0085534	452 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0031562's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0031562's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0031562	-	100	92.434	MGP_SPRETEiJ_G0031563	-	100	92.434
MGP_SPRETEiJ_G0031562	-	86	31.849	MGP_SPRETEiJ_G0025722	Eef1a2	95	31.849
MGP_SPRETEiJ_G0031562	-	52	30.901	MGP_SPRETEiJ_G0017001	Mtif2	50	30.901
MGP_SPRETEiJ_G0031562	-	72	30.836	MGP_SPRETEiJ_G0015970	Hbs1l	50	30.836
MGP_SPRETEiJ_G0031562	-	53	30.252	MGP_SPRETEiJ_G0028269	Guf1	73	30.252

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0031562	-	98	95.614	ENSG00000178952	TUFM	99	93.792	Homo_sapiens
MGP_SPRETEiJ_G0031562	-	98	81.579	ENSAPOG00000013385	tufm	99	74.945	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0031562	-	100	94.273	ENSAMEG00000015551	TUFM	100	94.273	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0031562	-	98	79.825	ENSACIG00000007388	tufm	96	77.938	Amphilophus_citrinellus
MGP_SPRETEiJ_G0031562	-	98	81.579	ENSAOCG00000001032	tufm	96	79.369	Amphiprion_ocellaris
MGP_SPRETEiJ_G0031562	-	98	81.579	ENSAPEG00000015751	tufm	96	79.369	Amphiprion_percula
MGP_SPRETEiJ_G0031562	-	98	80.702	ENSATEG00000002905	tufm	97	74.279	Anabas_testudineus
MGP_SPRETEiJ_G0031562	-	98	83.333	ENSACAG00000005399	TUFM	96	79.412	Anolis_carolinensis
MGP_SPRETEiJ_G0031562	-	100	92.478	ENSANAG00000022206	TUFM	99	92.478	Aotus_nancymaae
MGP_SPRETEiJ_G0031562	-	98	80.702	ENSACLG00000007403	tufm	93	74.723	Astatotilapia_calliptera
MGP_SPRETEiJ_G0031562	-	100	95.133	ENSBTAG00000019216	TUFM	100	95.133	Bos_taurus
MGP_SPRETEiJ_G0031562	-	91	56.532	WBGene00007000	tufm-1	84	56.532	Caenorhabditis_elegans
MGP_SPRETEiJ_G0031562	-	100	92.699	ENSCJAG00000006236	TUFM	99	92.699	Callithrix_jacchus
MGP_SPRETEiJ_G0031562	-	100	94.690	ENSCAFG00000017216	TUFM	100	94.690	Canis_familiaris
MGP_SPRETEiJ_G0031562	-	100	94.690	ENSCAFG00020017574	TUFM	100	94.690	Canis_lupus_dingo
MGP_SPRETEiJ_G0031562	-	100	95.354	ENSCHIG00000020583	TUFM	100	95.354	Capra_hircus
MGP_SPRETEiJ_G0031562	-	99	94.900	ENSTSYG00000026053	TUFM	99	94.900	Carlito_syrichta
MGP_SPRETEiJ_G0031562	-	99	97.391	ENSCAPG00000016052	-	100	97.391	Cavia_aperea
MGP_SPRETEiJ_G0031562	-	100	95.575	ENSCPOG00000010534	TUFM	100	95.575	Cavia_porcellus
MGP_SPRETEiJ_G0031562	-	100	92.257	ENSCCAG00000033296	TUFM	99	92.257	Cebus_capucinus
MGP_SPRETEiJ_G0031562	-	100	92.920	ENSCATG00000035822	TUFM	99	92.920	Cercocebus_atys
MGP_SPRETEiJ_G0031562	-	100	94.690	ENSCLAG00000013969	TUFM	100	94.690	Chinchilla_lanigera
MGP_SPRETEiJ_G0031562	-	100	92.920	ENSCSAG00000006314	TUFM	99	92.920	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0031562	-	97	95.575	ENSCHOG00000009077	TUFM	99	93.570	Choloepus_hoffmanni
MGP_SPRETEiJ_G0031562	-	98	82.456	ENSCPBG00000003874	TUFM	91	81.340	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0031562	-	89	58.955	ENSCING00000002841	-	93	58.955	Ciona_intestinalis
MGP_SPRETEiJ_G0031562	-	90	56.479	ENSCSAVG00000009380	-	89	56.479	Ciona_savignyi
MGP_SPRETEiJ_G0031562	-	98	95.614	ENSCANG00000035829	TUFM	99	93.126	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0031562	-	100	97.124	ENSCGRG00001022949	Tufm	100	97.124	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0031562	-	100	97.124	ENSCGRG00000001868	-	100	97.124	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0031562	-	98	86.207	ENSCGRG00000013193	-	100	67.982	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0031562	-	98	78.947	ENSCSEG00000013841	tufm	97	77.458	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0031562	-	98	81.579	ENSCVAG00000006251	tufm	98	78.282	Cyprinodon_variegatus
MGP_SPRETEiJ_G0031562	-	98	78.070	ENSDARG00000104173	tufm	99	73.602	Danio_rerio
MGP_SPRETEiJ_G0031562	-	98	93.860	ENSDNOG00000047636	TUFM	99	91.131	Dasypus_novemcinctus
MGP_SPRETEiJ_G0031562	-	100	75.221	ENSDORG00000023544	-	100	75.221	Dipodomys_ordii
MGP_SPRETEiJ_G0031562	-	99	96.522	ENSDORG00000016474	-	98	96.522	Dipodomys_ordii
MGP_SPRETEiJ_G0031562	-	89	67.662	FBgn0024556	mEFTu1	82	67.662	Drosophila_melanogaster
MGP_SPRETEiJ_G0031562	-	98	90.351	ENSETEG00000009601	TUFM	99	80.253	Echinops_telfairi
MGP_SPRETEiJ_G0031562	-	98	74.561	ENSEBUG00000015907	tufm	71	68.433	Eptatretus_burgeri
MGP_SPRETEiJ_G0031562	-	100	95.575	ENSEASG00005015477	TUFM	99	95.575	Equus_asinus_asinus
MGP_SPRETEiJ_G0031562	-	100	95.575	ENSECAG00000019763	TUFM	100	95.575	Equus_caballus
MGP_SPRETEiJ_G0031562	-	98	88.596	ENSEEUG00000001402	TUFM	99	90.127	Erinaceus_europaeus
MGP_SPRETEiJ_G0031562	-	98	81.579	ENSELUG00000013410	tufm	96	76.159	Esox_lucius
MGP_SPRETEiJ_G0031562	-	99	94.631	ENSFCAG00000003103	TUFM	65	94.469	Felis_catus
MGP_SPRETEiJ_G0031562	-	98	94.737	ENSFDAG00000010881	TUFM	100	92.722	Fukomys_damarensis
MGP_SPRETEiJ_G0031562	-	98	72.807	ENSFHEG00000020646	tufm	98	69.731	Fundulus_heteroclitus
MGP_SPRETEiJ_G0031562	-	98	78.947	ENSGMOG00000014616	tufm	99	76.053	Gadus_morhua
MGP_SPRETEiJ_G0031562	-	98	81.579	ENSGAFG00000004682	tufm	98	77.435	Gambusia_affinis
MGP_SPRETEiJ_G0031562	-	98	80.702	ENSGACG00000012961	tufm	99	75.610	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0031562	-	98	83.333	ENSGAGG00000006132	TUFM	99	83.375	Gopherus_agassizii
MGP_SPRETEiJ_G0031562	-	99	95.652	ENSGGOG00000014136	TUFM	99	93.570	Gorilla_gorilla
MGP_SPRETEiJ_G0031562	-	98	80.702	ENSHBUG00000019031	tufm	90	78.417	Haplochromis_burtoni
MGP_SPRETEiJ_G0031562	-	98	95.614	ENSHGLG00000006613	TUFM	99	92.683	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0031562	-	98	93.860	ENSHGLG00100004096	TUFM	99	88.914	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0031562	-	98	83.333	ENSHCOG00000014418	tufm	99	78.738	Hippocampus_comes
MGP_SPRETEiJ_G0031562	-	98	80.702	ENSIPUG00000022457	tufm	99	75.388	Ictalurus_punctatus
MGP_SPRETEiJ_G0031562	-	94	62.385	ENSIPUG00000020682	-	89	50.794	Ictalurus_punctatus
MGP_SPRETEiJ_G0031562	-	100	95.354	ENSSTOG00000011837	TUFM	100	95.354	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0031562	-	100	95.133	ENSJJAG00000011840	Tufm	100	95.133	Jaculus_jaculus
MGP_SPRETEiJ_G0031562	-	98	80.702	ENSKMAG00000009794	tufm	99	75.610	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0031562	-	98	78.070	ENSLBEG00000023735	tufm	97	78.417	Labrus_bergylta
MGP_SPRETEiJ_G0031562	-	98	82.456	ENSLACG00000008242	TUFM	91	80.340	Latimeria_chalumnae
MGP_SPRETEiJ_G0031562	-	98	96.491	ENSLAFG00000028911	TUFM	99	91.031	Loxodonta_africana
MGP_SPRETEiJ_G0031562	-	98	94.737	ENSMFAG00000033739	TUFM	99	92.905	Macaca_fascicularis
MGP_SPRETEiJ_G0031562	-	98	94.737	ENSMMUG00000003303	TUFM	99	93.126	Macaca_mulatta
MGP_SPRETEiJ_G0031562	-	98	94.737	ENSMNEG00000006031	TUFM	99	93.126	Macaca_nemestrina
MGP_SPRETEiJ_G0031562	-	100	92.920	ENSMLEG00000042133	TUFM	99	92.920	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0031562	-	98	80.702	ENSMAMG00000002053	tufm	99	75.166	Mastacembelus_armatus
MGP_SPRETEiJ_G0031562	-	98	80.702	ENSMZEG00005010857	tufm	93	74.945	Maylandia_zebra
MGP_SPRETEiJ_G0031562	-	100	97.124	ENSMAUG00000010490	Tufm	100	97.124	Mesocricetus_auratus
MGP_SPRETEiJ_G0031562	-	100	93.584	ENSMICG00000007650	TUFM	100	93.584	Microcebus_murinus
MGP_SPRETEiJ_G0031562	-	100	96.903	ENSMOCG00000010051	Tufm	100	96.903	Microtus_ochrogaster
MGP_SPRETEiJ_G0031562	-	98	81.579	ENSMMOG00000012344	tufm	96	73.923	Mola_mola
MGP_SPRETEiJ_G0031562	-	98	87.719	ENSMODG00000015564	TUFM	99	86.192	Monodelphis_domestica
MGP_SPRETEiJ_G0031562	-	98	80.702	ENSMALG00000020254	tufm	99	74.049	Monopterus_albus
MGP_SPRETEiJ_G0031562	-	100	99.558	MGP_CAROLIEiJ_G0030448	-	100	99.558	Mus_caroli
MGP_SPRETEiJ_G0031562	-	100	99.558	MGP_CAROLIEiJ_G0030449	-	100	99.558	Mus_caroli
MGP_SPRETEiJ_G0031562	-	100	99.558	ENSMUSG00000073838	Tufm	100	99.558	Mus_musculus
MGP_SPRETEiJ_G0031562	-	100	99.336	MGP_PahariEiJ_G0013658	-	100	99.336	Mus_pahari
MGP_SPRETEiJ_G0031562	-	100	99.336	MGP_PahariEiJ_G0013659	-	100	99.336	Mus_pahari
MGP_SPRETEiJ_G0031562	-	98	95.614	ENSMPUG00000012816	TUFM	98	95.957	Mustela_putorius_furo
MGP_SPRETEiJ_G0031562	-	100	94.912	ENSMLUG00000012335	-	100	94.912	Myotis_lucifugus
MGP_SPRETEiJ_G0031562	-	100	96.681	ENSNGAG00000008610	Tufm	100	96.681	Nannospalax_galili
MGP_SPRETEiJ_G0031562	-	98	80.702	ENSNBRG00000006466	tufm	96	78.729	Neolamprologus_brichardi
MGP_SPRETEiJ_G0031562	-	99	88.938	ENSNLEG00000011063	TUFM	99	88.938	Nomascus_leucogenys
MGP_SPRETEiJ_G0031562	-	88	87.255	ENSMEUG00000011131	TUFM	100	91.066	Notamacropus_eugenii
MGP_SPRETEiJ_G0031562	-	98	93.860	ENSOPRG00000002318	-	99	82.262	Ochotona_princeps
MGP_SPRETEiJ_G0031562	-	99	96.522	ENSODEG00000013626	-	98	96.522	Octodon_degus
MGP_SPRETEiJ_G0031562	-	98	80.702	ENSONIG00000019389	tufm	99	75.166	Oreochromis_niloticus
MGP_SPRETEiJ_G0031562	-	98	92.105	ENSOANG00000013114	TUFM	99	87.816	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0031562	-	98	95.614	ENSOCUG00000002683	TUFM	99	94.923	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0031562	-	98	81.579	ENSORLG00000011497	tufm	99	73.836	Oryzias_latipes
MGP_SPRETEiJ_G0031562	-	98	81.579	ENSORLG00020013437	tufm	99	74.058	Oryzias_latipes_hni
MGP_SPRETEiJ_G0031562	-	98	81.579	ENSORLG00015003107	tufm	99	73.836	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0031562	-	98	82.456	ENSOMEG00000016958	tufm	99	74.501	Oryzias_melastigma
MGP_SPRETEiJ_G0031562	-	98	96.491	ENSOGAG00000006875	TUFM	100	94.027	Otolemur_garnettii
MGP_SPRETEiJ_G0031562	-	98	96.491	ENSOARG00000002357	TUFM	100	94.928	Ovis_aries
MGP_SPRETEiJ_G0031562	-	98	95.614	ENSPPAG00000035168	TUFM	99	93.570	Pan_paniscus
MGP_SPRETEiJ_G0031562	-	98	95.614	ENSPPRG00000014248	TUFM	99	94.469	Panthera_pardus
MGP_SPRETEiJ_G0031562	-	98	95.614	ENSPTIG00000009980	TUFM	99	95.024	Panthera_tigris_altaica
MGP_SPRETEiJ_G0031562	-	98	95.614	ENSPTRG00000007939	TUFM	99	93.792	Pan_troglodytes
MGP_SPRETEiJ_G0031562	-	98	94.737	ENSPANG00000019624	TUFM	99	93.348	Papio_anubis
MGP_SPRETEiJ_G0031562	-	98	78.070	ENSPKIG00000023809	tufm	93	77.014	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0031562	-	98	81.579	ENSPSIG00000005302	TUFM	96	81.395	Pelodiscus_sinensis
MGP_SPRETEiJ_G0031562	-	98	79.825	ENSPMGG00000015631	tufm	99	77.458	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0031562	-	100	97.566	ENSPEMG00000012208	Tufm	100	97.566	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0031562	-	98	86.842	ENSPCIG00000025208	TUFM	100	84.649	Phascolarctos_cinereus
MGP_SPRETEiJ_G0031562	-	99	80.870	ENSPFOG00000007043	tufm	99	73.661	Poecilia_formosa
MGP_SPRETEiJ_G0031562	-	98	80.702	ENSPLAG00000014372	tufm	99	75.339	Poecilia_latipinna
MGP_SPRETEiJ_G0031562	-	98	80.702	ENSPMEG00000019508	tufm	99	75.113	Poecilia_mexicana
MGP_SPRETEiJ_G0031562	-	98	80.702	ENSPMEG00000014520	-	99	73.884	Poecilia_mexicana
MGP_SPRETEiJ_G0031562	-	98	80.702	ENSPREG00000013913	tufm	99	74.279	Poecilia_reticulata
MGP_SPRETEiJ_G0031562	-	100	92.920	ENSPPYG00000007226	TUFM	99	92.920	Pongo_abelii
MGP_SPRETEiJ_G0031562	-	99	86.283	ENSPCAG00000015294	TUFM	99	86.283	Procavia_capensis
MGP_SPRETEiJ_G0031562	-	100	93.584	ENSPCOG00000012267	TUFM	99	93.584	Propithecus_coquereli
MGP_SPRETEiJ_G0031562	-	78	95.556	ENSPVAG00000003960	-	50	94.558	Pteropus_vampyrus
MGP_SPRETEiJ_G0031562	-	98	80.702	ENSPNYG00000008905	tufm	99	75.168	Pundamilia_nyererei
MGP_SPRETEiJ_G0031562	-	98	83.333	ENSPNAG00000018881	tufm	99	75.831	Pygocentrus_nattereri
MGP_SPRETEiJ_G0031562	-	100	99.336	ENSRNOG00000018604	Tufm	100	99.336	Rattus_norvegicus
MGP_SPRETEiJ_G0031562	-	99	95.652	ENSRBIG00000042008	-	99	88.717	Rhinopithecus_bieti
MGP_SPRETEiJ_G0031562	-	94	94.495	ENSRBIG00000036713	-	93	93.701	Rhinopithecus_bieti
MGP_SPRETEiJ_G0031562	-	98	95.614	ENSRROG00000036858	-	99	93.126	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0031562	-	70	91.749	ENSRROG00000044977	-	82	91.749	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0031562	-	96	52.679	YOR187W	TUF1	90	61.421	Saccharomyces_cerevisiae
MGP_SPRETEiJ_G0031562	-	99	90.869	ENSSBOG00000026542	TUFM	99	90.869	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0031562	-	98	90.351	ENSSHAG00000012121	TUFM	100	89.120	Sarcophilus_harrisii
MGP_SPRETEiJ_G0031562	-	98	77.193	ENSSFOG00015013352	tufm	94	76.739	Scleropages_formosus
MGP_SPRETEiJ_G0031562	-	98	82.456	ENSSMAG00000010053	tufm	99	75.388	Scophthalmus_maximus
MGP_SPRETEiJ_G0031562	-	98	81.579	ENSSDUG00000016896	tufm	99	74.945	Seriola_dumerili
MGP_SPRETEiJ_G0031562	-	98	81.579	ENSSLDG00000006494	tufm	99	76.082	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0031562	-	98	92.982	ENSSARG00000011228	TUFM	100	94.211	Sorex_araneus
MGP_SPRETEiJ_G0031562	-	98	78.448	ENSSPUG00000016312	TUFM	96	72.902	Sphenodon_punctatus
MGP_SPRETEiJ_G0031562	-	98	79.825	ENSSPAG00000009936	tufm	98	75.561	Stegastes_partitus
MGP_SPRETEiJ_G0031562	-	100	94.912	ENSSSCG00000007803	TUFM	100	94.912	Sus_scrofa
MGP_SPRETEiJ_G0031562	-	98	82.456	ENSTRUG00000008300	tufm	99	75.388	Takifugu_rubripes
MGP_SPRETEiJ_G0031562	-	98	96.491	ENSTBEG00000015029	TUFM	99	90.769	Tupaia_belangeri
MGP_SPRETEiJ_G0031562	-	97	91.071	ENSTTRG00000005930	-	57	93.023	Tursiops_truncatus
MGP_SPRETEiJ_G0031562	-	63	94.909	ENSTTRG00000001980	-	100	94.909	Tursiops_truncatus
MGP_SPRETEiJ_G0031562	-	98	94.737	ENSUAMG00000001471	TUFM	99	93.348	Ursus_americanus
MGP_SPRETEiJ_G0031562	-	98	95.614	ENSUMAG00000009341	TUFM	99	96.049	Ursus_maritimus
MGP_SPRETEiJ_G0031562	-	63	94.545	ENSVPAG00000009541	TUFM	100	94.545	Vicugna_pacos
MGP_SPRETEiJ_G0031562	-	100	94.690	ENSVVUG00000024170	TUFM	100	94.690	Vulpes_vulpes
MGP_SPRETEiJ_G0031562	-	83	48.446	ENSXETG00000028019	-	68	85.106	Xenopus_tropicalis
MGP_SPRETEiJ_G0031562	-	98	81.579	ENSXMAG00000011848	tufm	96	78.177	Xiphophorus_maculatus