EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0031570 (Gene tree)
Gene ID: -
Gene Symbol: Sgf29
Alias: 1700023O11Rik|Ccdc101
Full Name: SAGA complex associated factor 29
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 27767 bases
Position: chr7:116543298-116571064
Accession: 1922815
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0085581	DUF1325	PF07039.11	9e-40	1	1
MGP_SPRETEiJ_P0085588	DUF1325	PF07039.11	2.6e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0085589	-	416	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0085588	-	511	-	MGP_SPRETEiJ_P0085588	159 (aa)	-	-
MGP_SPRETEiJ_T0085587	-	344	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0085586	-	732	-	MGP_SPRETEiJ_P0085586	152 (aa)	-	UPI000719A340
MGP_SPRETEiJ_T0085585	-	777	-	MGP_SPRETEiJ_P0085585	163 (aa)	-	UPI000719A20C
MGP_SPRETEiJ_T0085584	-	786	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0085583	-	424	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0085582	-	461	-	MGP_SPRETEiJ_P0085582	18 (aa)	-	UPI000719A306
MGP_SPRETEiJ_T0085581	-	1312	-	MGP_SPRETEiJ_P0085581	293 (aa)	-	UPI00000E6940
MGP_SPRETEiJ_T0085580	-	367	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0031570's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0031570's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0031570	Sgf29	100	98.294	ENSG00000176476	SGF29	100	98.294	Homo_sapiens
MGP_SPRETEiJ_G0031570	Sgf29	99	91.724	ENSAPOG00000007072	sgf29	100	91.724	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0031570	Sgf29	100	96.587	ENSAMEG00000015388	SGF29	100	96.587	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0031570	Sgf29	91	92.414	ENSACIG00000024432	sgf29	100	91.566	Amphilophus_citrinellus
MGP_SPRETEiJ_G0031570	Sgf29	99	91.724	ENSAOCG00000013494	sgf29	100	91.724	Amphiprion_ocellaris
MGP_SPRETEiJ_G0031570	Sgf29	93	91.216	ENSAPEG00000007284	sgf29	93	90.873	Amphiprion_percula
MGP_SPRETEiJ_G0031570	Sgf29	99	91.724	ENSATEG00000017566	sgf29	100	91.724	Anabas_testudineus
MGP_SPRETEiJ_G0031570	Sgf29	100	96.587	ENSACAG00000006595	SGF29	100	96.587	Anolis_carolinensis
MGP_SPRETEiJ_G0031570	Sgf29	100	98.294	ENSANAG00000037641	-	100	98.294	Aotus_nancymaae
MGP_SPRETEiJ_G0031570	Sgf29	99	83.904	ENSANAG00000023337	-	93	83.904	Aotus_nancymaae
MGP_SPRETEiJ_G0031570	Sgf29	95	86.755	ENSANAG00000032813	-	96	85.656	Aotus_nancymaae
MGP_SPRETEiJ_G0031570	Sgf29	99	91.034	ENSACLG00000016730	sgf29	100	91.034	Astatotilapia_calliptera
MGP_SPRETEiJ_G0031570	Sgf29	100	90.635	ENSAMXG00000003395	sgf29	100	90.635	Astyanax_mexicanus
MGP_SPRETEiJ_G0031570	Sgf29	100	99.317	ENSBTAG00000016883	SGF29	100	99.317	Bos_taurus
MGP_SPRETEiJ_G0031570	Sgf29	91	42.759	WBGene00021205	Y17G9B.8	89	37.991	Caenorhabditis_elegans
MGP_SPRETEiJ_G0031570	Sgf29	100	98.294	ENSCJAG00000006577	SGF29	100	98.294	Callithrix_jacchus
MGP_SPRETEiJ_G0031570	Sgf29	96	99.291	ENSCAFG00000017127	SGF29	92	99.291	Canis_familiaris
MGP_SPRETEiJ_G0031570	Sgf29	96	99.291	ENSCAFG00020017597	SGF29	92	99.291	Canis_lupus_dingo
MGP_SPRETEiJ_G0031570	Sgf29	100	99.317	ENSCHIG00000015325	SGF29	100	99.317	Capra_hircus
MGP_SPRETEiJ_G0031570	Sgf29	100	98.976	ENSTSYG00000025878	-	100	98.976	Carlito_syrichta
MGP_SPRETEiJ_G0031570	Sgf29	91	95.862	ENSTSYG00000003314	-	97	96.341	Carlito_syrichta
MGP_SPRETEiJ_G0031570	Sgf29	92	98.639	ENSCAPG00000000732	SGF29	96	86.235	Cavia_aperea
MGP_SPRETEiJ_G0031570	Sgf29	100	98.294	ENSCPOG00000027037	SGF29	100	98.294	Cavia_porcellus
MGP_SPRETEiJ_G0031570	Sgf29	99	73.973	ENSCCAG00000027313	-	66	73.973	Cebus_capucinus
MGP_SPRETEiJ_G0031570	Sgf29	100	98.294	ENSCCAG00000027359	-	100	98.294	Cebus_capucinus
MGP_SPRETEiJ_G0031570	Sgf29	100	98.294	ENSCATG00000034020	SGF29	100	98.294	Cercocebus_atys
MGP_SPRETEiJ_G0031570	Sgf29	100	98.976	ENSCLAG00000011510	SGF29	100	98.976	Chinchilla_lanigera
MGP_SPRETEiJ_G0031570	Sgf29	100	92.308	ENSCSAG00000006259	SGF29	100	92.308	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0031570	Sgf29	91	71.724	ENSCHOG00000013831	-	100	65.490	Choloepus_hoffmanni
MGP_SPRETEiJ_G0031570	Sgf29	100	97.270	ENSCPBG00000012638	SGF29	85	97.270	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0031570	Sgf29	98	67.949	ENSCING00000012953	-	99	62.284	Ciona_intestinalis
MGP_SPRETEiJ_G0031570	Sgf29	63	71.000	ENSCSAVG00000007328	-	87	57.619	Ciona_savignyi
MGP_SPRETEiJ_G0031570	Sgf29	87	97.122	ENSCANG00000039654	SGF29	100	97.992	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0031570	Sgf29	100	99.317	ENSCGRG00001016730	-	100	99.317	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0031570	Sgf29	100	93.878	ENSCGRG00001014941	-	100	93.878	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0031570	Sgf29	100	98.976	ENSCGRG00000003808	Sgf29	100	98.976	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0031570	Sgf29	91	90.345	ENSCSEG00000010575	sgf29	86	90.496	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0031570	Sgf29	99	91.724	ENSCVAG00000014381	sgf29	100	91.724	Cyprinodon_variegatus
MGP_SPRETEiJ_G0031570	Sgf29	100	91.468	ENSDARG00000002339	sgf29	100	91.468	Danio_rerio
MGP_SPRETEiJ_G0031570	Sgf29	100	99.317	ENSDNOG00000048338	SGF29	99	99.317	Dasypus_novemcinctus
MGP_SPRETEiJ_G0031570	Sgf29	100	98.976	ENSDORG00000007002	Sgf29	100	98.976	Dipodomys_ordii
MGP_SPRETEiJ_G0031570	Sgf29	91	60.417	FBgn0050390	Sgf29	94	49.306	Drosophila_melanogaster
MGP_SPRETEiJ_G0031570	Sgf29	99	80.137	ENSEBUG00000008631	sgf29	98	80.137	Eptatretus_burgeri
MGP_SPRETEiJ_G0031570	Sgf29	92	99.257	ENSEASG00005014751	SGF29	91	99.257	Equus_asinus_asinus
MGP_SPRETEiJ_G0031570	Sgf29	100	99.317	ENSECAG00000011445	SGF29	95	99.317	Equus_caballus
MGP_SPRETEiJ_G0031570	Sgf29	91	99.310	ENSEEUG00000008521	SGF29	100	99.254	Erinaceus_europaeus
MGP_SPRETEiJ_G0031570	Sgf29	99	91.724	ENSELUG00000023888	sgf29	100	91.724	Esox_lucius
MGP_SPRETEiJ_G0031570	Sgf29	100	99.317	ENSFCAG00000012297	SGF29	100	99.317	Felis_catus
MGP_SPRETEiJ_G0031570	Sgf29	100	98.635	ENSFDAG00000012928	SGF29	100	98.635	Fukomys_damarensis
MGP_SPRETEiJ_G0031570	Sgf29	92	93.151	ENSFHEG00000022427	sgf29	93	90.873	Fundulus_heteroclitus
MGP_SPRETEiJ_G0031570	Sgf29	99	89.347	ENSGMOG00000000328	sgf29	100	89.347	Gadus_morhua
MGP_SPRETEiJ_G0031570	Sgf29	100	93.515	ENSGALG00000020590	SGF29	100	93.515	Gallus_gallus
MGP_SPRETEiJ_G0031570	Sgf29	99	91.724	ENSGAFG00000020626	sgf29	100	91.724	Gambusia_affinis
MGP_SPRETEiJ_G0031570	Sgf29	99	88.621	ENSGACG00000015001	sgf29	100	88.621	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0031570	Sgf29	100	97.611	ENSGAGG00000012655	SGF29	100	97.611	Gopherus_agassizii
MGP_SPRETEiJ_G0031570	Sgf29	100	97.952	ENSGGOG00000000807	-	100	97.952	Gorilla_gorilla
MGP_SPRETEiJ_G0031570	Sgf29	97	88.312	ENSHBUG00000013677	sgf29	91	79.111	Haplochromis_burtoni
MGP_SPRETEiJ_G0031570	Sgf29	100	98.976	ENSHGLG00000014468	SGF29	100	98.976	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0031570	Sgf29	100	98.976	ENSHGLG00100000132	SGF29	100	98.976	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0031570	Sgf29	99	91.034	ENSHCOG00000002018	sgf29	100	91.034	Hippocampus_comes
MGP_SPRETEiJ_G0031570	Sgf29	100	91.468	ENSIPUG00000001851	sgf29	100	91.468	Ictalurus_punctatus
MGP_SPRETEiJ_G0031570	Sgf29	100	99.317	ENSSTOG00000013258	SGF29	100	99.317	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0031570	Sgf29	100	99.317	ENSJJAG00000009013	Sgf29	100	99.317	Jaculus_jaculus
MGP_SPRETEiJ_G0031570	Sgf29	99	90.345	ENSKMAG00000004341	sgf29	99	90.345	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0031570	Sgf29	91	92.414	ENSLBEG00000006754	sgf29	100	90.800	Labrus_bergylta
MGP_SPRETEiJ_G0031570	Sgf29	83	80.247	ENSLACG00000005336	SGF29	99	80.247	Latimeria_chalumnae
MGP_SPRETEiJ_G0031570	Sgf29	100	99.317	ENSLAFG00000028439	SGF29	100	99.317	Loxodonta_africana
MGP_SPRETEiJ_G0031570	Sgf29	100	98.294	ENSMFAG00000038040	SGF29	100	98.294	Macaca_fascicularis
MGP_SPRETEiJ_G0031570	Sgf29	100	98.294	ENSMMUG00000011370	SGF29	100	98.294	Macaca_mulatta
MGP_SPRETEiJ_G0031570	Sgf29	100	97.952	ENSMNEG00000043534	SGF29	100	97.952	Macaca_nemestrina
MGP_SPRETEiJ_G0031570	Sgf29	100	98.294	ENSMLEG00000031039	SGF29	100	98.294	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0031570	Sgf29	99	91.379	ENSMAMG00000017907	sgf29	100	91.379	Mastacembelus_armatus
MGP_SPRETEiJ_G0031570	Sgf29	99	91.034	ENSMZEG00005001194	sgf29	100	91.034	Maylandia_zebra
MGP_SPRETEiJ_G0031570	Sgf29	99	91.034	ENSMZEG00005002947	sgf29	100	91.034	Maylandia_zebra
MGP_SPRETEiJ_G0031570	Sgf29	100	93.515	ENSMGAG00000012201	SGF29	100	93.515	Meleagris_gallopavo
MGP_SPRETEiJ_G0031570	Sgf29	100	99.317	ENSMAUG00000011063	Sgf29	100	99.317	Mesocricetus_auratus
MGP_SPRETEiJ_G0031570	Sgf29	100	98.976	ENSMICG00000009973	SGF29	100	98.976	Microcebus_murinus
MGP_SPRETEiJ_G0031570	Sgf29	100	99.317	ENSMOCG00000021358	Sgf29	100	99.317	Microtus_ochrogaster
MGP_SPRETEiJ_G0031570	Sgf29	91	90.345	ENSMMOG00000012706	sgf29	100	88.933	Mola_mola
MGP_SPRETEiJ_G0031570	Sgf29	100	97.270	ENSMODG00000015642	SGF29	100	97.270	Monodelphis_domestica
MGP_SPRETEiJ_G0031570	Sgf29	99	91.724	ENSMALG00000000231	sgf29	96	91.724	Monopterus_albus
MGP_SPRETEiJ_G0031570	Sgf29	100	100.000	MGP_CAROLIEiJ_G0030456	Sgf29	100	100.000	Mus_caroli
MGP_SPRETEiJ_G0031570	Sgf29	100	100.000	ENSMUSG00000030714	Sgf29	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0031570	Sgf29	100	100.000	MGP_PahariEiJ_G0013666	Sgf29	100	100.000	Mus_pahari
MGP_SPRETEiJ_G0031570	Sgf29	100	99.317	ENSMPUG00000012669	SGF29	100	99.317	Mustela_putorius_furo
MGP_SPRETEiJ_G0031570	Sgf29	100	99.317	ENSMLUG00000022554	SGF29	100	99.317	Myotis_lucifugus
MGP_SPRETEiJ_G0031570	Sgf29	100	98.976	ENSNGAG00000022634	Sgf29	100	98.976	Nannospalax_galili
MGP_SPRETEiJ_G0031570	Sgf29	91	91.724	ENSNBRG00000020775	sgf29	100	91.165	Neolamprologus_brichardi
MGP_SPRETEiJ_G0031570	Sgf29	99	88.014	ENSNLEG00000001604	SGF29	99	88.014	Nomascus_leucogenys
MGP_SPRETEiJ_G0031570	Sgf29	76	98.000	ENSMEUG00000006221	SGF29	76	98.000	Notamacropus_eugenii
MGP_SPRETEiJ_G0031570	Sgf29	100	98.976	ENSOPRG00000009316	SGF29	100	98.976	Ochotona_princeps
MGP_SPRETEiJ_G0031570	Sgf29	100	98.294	ENSODEG00000013702	SGF29	100	98.294	Octodon_degus
MGP_SPRETEiJ_G0031570	Sgf29	99	91.065	ENSONIG00000009377	sgf29	100	91.065	Oreochromis_niloticus
MGP_SPRETEiJ_G0031570	Sgf29	91	97.931	ENSOANG00000009696	SGF29	100	97.980	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0031570	Sgf29	92	98.889	ENSOCUG00000025361	-	100	98.889	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0031570	Sgf29	83	76.230	ENSOCUG00000021684	-	100	76.230	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0031570	Sgf29	99	90.690	ENSORLG00000027873	sgf29	100	90.690	Oryzias_latipes
MGP_SPRETEiJ_G0031570	Sgf29	99	90.690	ENSORLG00020020976	-	100	90.690	Oryzias_latipes_hni
MGP_SPRETEiJ_G0031570	Sgf29	99	90.690	ENSORLG00015011795	sgf29	100	90.690	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0031570	Sgf29	99	90.690	ENSOMEG00000020118	sgf29	100	90.690	Oryzias_melastigma
MGP_SPRETEiJ_G0031570	Sgf29	100	91.809	ENSOGAG00000015794	-	100	91.809	Otolemur_garnettii
MGP_SPRETEiJ_G0031570	Sgf29	100	65.646	ENSOGAG00000034571	-	100	65.646	Otolemur_garnettii
MGP_SPRETEiJ_G0031570	Sgf29	100	99.317	ENSOARG00000003226	SGF29	100	99.317	Ovis_aries
MGP_SPRETEiJ_G0031570	Sgf29	96	98.221	ENSPPAG00000039380	SGF29	99	96.296	Pan_paniscus
MGP_SPRETEiJ_G0031570	Sgf29	100	99.317	ENSPPRG00000006831	SGF29	100	99.317	Panthera_pardus
MGP_SPRETEiJ_G0031570	Sgf29	100	99.317	ENSPTIG00000014381	SGF29	100	99.317	Panthera_tigris_altaica
MGP_SPRETEiJ_G0031570	Sgf29	100	73.720	ENSPTRG00000007925	SGF29	100	73.579	Pan_troglodytes
MGP_SPRETEiJ_G0031570	Sgf29	100	98.294	ENSPANG00000019684	SGF29	100	98.294	Papio_anubis
MGP_SPRETEiJ_G0031570	Sgf29	100	88.055	ENSPKIG00000018503	sgf29	100	88.055	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0031570	Sgf29	91	93.793	ENSPMGG00000006683	sgf29	99	84.828	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0031570	Sgf29	100	97.611	ENSPCIG00000025200	SGF29	100	97.611	Phascolarctos_cinereus
MGP_SPRETEiJ_G0031570	Sgf29	99	92.069	ENSPFOG00000010035	sgf29	99	92.069	Poecilia_formosa
MGP_SPRETEiJ_G0031570	Sgf29	99	92.069	ENSPLAG00000000559	sgf29	100	92.069	Poecilia_latipinna
MGP_SPRETEiJ_G0031570	Sgf29	99	92.069	ENSPMEG00000007026	sgf29	100	92.069	Poecilia_mexicana
MGP_SPRETEiJ_G0031570	Sgf29	99	91.724	ENSPREG00000011868	sgf29	100	91.724	Poecilia_reticulata
MGP_SPRETEiJ_G0031570	Sgf29	100	98.294	ENSPPYG00000007233	SGF29	100	98.294	Pongo_abelii
MGP_SPRETEiJ_G0031570	Sgf29	100	98.976	ENSPCOG00000028233	SGF29	100	98.976	Propithecus_coquereli
MGP_SPRETEiJ_G0031570	Sgf29	96	89.474	ENSPNYG00000012353	sgf29	100	91.165	Pundamilia_nyererei
MGP_SPRETEiJ_G0031570	Sgf29	91	93.793	ENSPNAG00000014651	sgf29	100	91.968	Pygocentrus_nattereri
MGP_SPRETEiJ_G0031570	Sgf29	100	99.659	ENSRNOG00000019245	Sgf29	100	99.659	Rattus_norvegicus
MGP_SPRETEiJ_G0031570	Sgf29	100	98.294	ENSRBIG00000041003	SGF29	100	98.294	Rhinopithecus_bieti
MGP_SPRETEiJ_G0031570	Sgf29	100	98.294	ENSRROG00000044894	SGF29	100	98.294	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0031570	Sgf29	91	98.120	ENSSBOG00000008004	SGF29	100	97.992	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0031570	Sgf29	100	97.611	ENSSHAG00000011279	-	100	97.611	Sarcophilus_harrisii
MGP_SPRETEiJ_G0031570	Sgf29	82	68.702	ENSSHAG00000002930	-	100	65.823	Sarcophilus_harrisii
MGP_SPRETEiJ_G0031570	Sgf29	100	87.713	ENSSFOG00015001254	sgf29	100	87.713	Scleropages_formosus
MGP_SPRETEiJ_G0031570	Sgf29	99	92.069	ENSSMAG00000016613	sgf29	100	92.069	Scophthalmus_maximus
MGP_SPRETEiJ_G0031570	Sgf29	99	91.724	ENSSDUG00000005977	sgf29	100	91.724	Seriola_dumerili
MGP_SPRETEiJ_G0031570	Sgf29	99	91.724	ENSSLDG00000012446	sgf29	100	91.724	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0031570	Sgf29	100	96.928	ENSSPUG00000010121	SGF29	100	96.928	Sphenodon_punctatus
MGP_SPRETEiJ_G0031570	Sgf29	99	91.724	ENSSPAG00000018994	sgf29	100	91.724	Stegastes_partitus
MGP_SPRETEiJ_G0031570	Sgf29	100	99.317	ENSSSCG00000022778	SGF29	100	99.317	Sus_scrofa
MGP_SPRETEiJ_G0031570	Sgf29	96	90.426	ENSTNIG00000006496	SGF29	100	90.426	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0031570	Sgf29	99	90.690	ENSTNIG00000001984	sgf29	99	90.690	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0031570	Sgf29	97	97.895	ENSUAMG00000010172	SGF29	85	99.257	Ursus_americanus
MGP_SPRETEiJ_G0031570	Sgf29	91	99.310	ENSUMAG00000010966	SGF29	79	98.450	Ursus_maritimus
MGP_SPRETEiJ_G0031570	Sgf29	100	95.904	ENSXETG00000033185	sgf29	100	95.904	Xenopus_tropicalis
MGP_SPRETEiJ_G0031570	Sgf29	99	91.753	ENSXCOG00000011501	sgf29	100	91.753	Xiphophorus_couchianus
MGP_SPRETEiJ_G0031570	Sgf29	99	92.069	ENSXMAG00000010932	sgf29	100	92.069	Xiphophorus_maculatus