EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0031606 (Gene tree)
Gene ID: -
Gene Symbol: Sept1
Alias: Diff6|PNUTL3
Full Name: septin 1
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 20020 bases
Position: chr7:117147868-117167887
Accession: 1858916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0085805	MMR_HSR1	PF01926.23	2e-08	1	1
MGP_SPRETEiJ_P0085804	MMR_HSR1	PF01926.23	3.4e-08	1	1
MGP_SPRETEiJ_P0085802	MMR_HSR1	PF01926.23	5e-08	1	1
MGP_SPRETEiJ_P0085801	MMR_HSR1	PF01926.23	5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0085802	-	1048	-	MGP_SPRETEiJ_P0085802	328 (aa)	-	-
MGP_SPRETEiJ_T0085803	-	789	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0085801	-	1101	-	MGP_SPRETEiJ_P0085801	366 (aa)	-	-
MGP_SPRETEiJ_T0085806	-	821	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0085807	-	242	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0085804	-	706	-	MGP_SPRETEiJ_P0085804	186 (aa)	-	-
MGP_SPRETEiJ_T0085805	-	599	-	MGP_SPRETEiJ_P0085805	145 (aa)	-	-
MGP_SPRETEiJ_T0085808	-	712	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0085799	-	569	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0031606's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0031606's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0031606	Sept1	100	40.816	MGP_SPRETEiJ_G0028421	Sept11	76	40.762
MGP_SPRETEiJ_G0031606	Sept1	100	40.816	MGP_SPRETEiJ_G0028782	Sept14	82	38.630
MGP_SPRETEiJ_G0031606	Sept1	100	64.828	MGP_SPRETEiJ_G0015261	-	100	60.748
MGP_SPRETEiJ_G0031606	Sept1	100	50.685	MGP_SPRETEiJ_G0020978	Sept3	86	46.575
MGP_SPRETEiJ_G0031606	Sept1	100	66.897	MGP_SPRETEiJ_G0017778	Sept4	99	64.516
MGP_SPRETEiJ_G0031606	Sept1	100	43.537	MGP_SPRETEiJ_G0016151	Sept10	71	40.064
MGP_SPRETEiJ_G0031606	Sept1	100	50.000	MGP_SPRETEiJ_G0018307	Sept9	83	46.000
MGP_SPRETEiJ_G0031606	Sept1	100	68.276	MGP_SPRETEiJ_G0021446	-	93	63.068
MGP_SPRETEiJ_G0031606	Sept1	100	59.310	MGP_SPRETEiJ_G0033040	Sept7	76	50.291
MGP_SPRETEiJ_G0031606	Sept1	100	47.260	MGP_SPRETEiJ_G0021310	Sept12	77	43.775
MGP_SPRETEiJ_G0031606	Sept1	100	38.095	MGP_SPRETEiJ_G0017184	Sept8	76	36.795
MGP_SPRETEiJ_G0031606	Sept1	100	39.456	MGP_SPRETEiJ_G0034149	Sept6	76	41.056

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0031606	Sept1	100	95.862	ENSG00000180096	SEPT1	87	98.361	Homo_sapiens
MGP_SPRETEiJ_G0031606	Sept1	99	92.916	ENSAMEG00000007865	SEPT1	99	92.916	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0031606	Sept1	100	95.862	ENSANAG00000029084	SEPT1	100	95.095	Aotus_nancymaae
MGP_SPRETEiJ_G0031606	Sept1	100	95.862	ENSBTAG00000021219	SEPT1	100	95.095	Bos_taurus
MGP_SPRETEiJ_G0031606	Sept1	100	95.172	ENSCJAG00000002577	SEPT1	89	93.733	Callithrix_jacchus
MGP_SPRETEiJ_G0031606	Sept1	100	95.172	ENSCAFG00000016576	SEPT1	99	94.536	Canis_familiaris
MGP_SPRETEiJ_G0031606	Sept1	100	95.172	ENSCAFG00020017813	SEPT1	99	94.536	Canis_lupus_dingo
MGP_SPRETEiJ_G0031606	Sept1	100	92.267	ENSCHIG00000017447	SEPT1	100	92.267	Capra_hircus
MGP_SPRETEiJ_G0031606	Sept1	100	95.862	ENSTSYG00000035596	SEPT1	100	94.005	Carlito_syrichta
MGP_SPRETEiJ_G0031606	Sept1	100	93.793	ENSCAPG00000001347	SEPT1	99	81.212	Cavia_aperea
MGP_SPRETEiJ_G0031606	Sept1	100	93.793	ENSCPOG00000003088	SEPT1	99	92.055	Cavia_porcellus
MGP_SPRETEiJ_G0031606	Sept1	100	95.862	ENSCCAG00000030164	SEPT1	89	84.046	Cebus_capucinus
MGP_SPRETEiJ_G0031606	Sept1	100	95.862	ENSCATG00000037250	SEPT1	99	95.640	Cercocebus_atys
MGP_SPRETEiJ_G0031606	Sept1	100	94.624	ENSCLAG00000010486	SEPT1	100	93.529	Chinchilla_lanigera
MGP_SPRETEiJ_G0031606	Sept1	100	95.862	ENSCSAG00000006056	SEPT1	99	95.640	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0031606	Sept1	100	95.862	ENSCANG00000035786	SEPT1	89	95.368	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0031606	Sept1	100	97.312	ENSCGRG00001003374	Sept1	100	97.003	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0031606	Sept1	100	97.312	ENSCGRG00000004919	Sept1	100	96.185	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0031606	Sept1	100	94.483	ENSDNOG00000014680	SEPT1	85	93.460	Dasypus_novemcinctus
MGP_SPRETEiJ_G0031606	Sept1	100	95.913	ENSDORG00000011443	Sept1	100	95.913	Dipodomys_ordii
MGP_SPRETEiJ_G0031606	Sept1	100	95.862	ENSEASG00005013153	SEPT1	100	94.690	Equus_asinus_asinus
MGP_SPRETEiJ_G0031606	Sept1	100	95.862	ENSECAG00000009390	SEPT1	96	95.095	Equus_caballus
MGP_SPRETEiJ_G0031606	Sept1	100	95.172	ENSEEUG00000007661	SEPT1	100	92.643	Erinaceus_europaeus
MGP_SPRETEiJ_G0031606	Sept1	100	95.172	ENSFCAG00000013541	SEPT1	94	94.278	Felis_catus
MGP_SPRETEiJ_G0031606	Sept1	100	94.483	ENSGGOG00000017024	SEPT1	88	73.529	Gorilla_gorilla
MGP_SPRETEiJ_G0031606	Sept1	100	96.552	ENSSTOG00000002782	SEPT1	100	95.368	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0031606	Sept1	100	97.931	ENSJJAG00000023131	Sept1	100	94.278	Jaculus_jaculus
MGP_SPRETEiJ_G0031606	Sept1	100	95.172	ENSLAFG00000027789	SEPT1	99	93.169	Loxodonta_africana
MGP_SPRETEiJ_G0031606	Sept1	100	95.862	ENSMFAG00000031504	SEPT1	89	95.640	Macaca_fascicularis
MGP_SPRETEiJ_G0031606	Sept1	100	95.862	ENSMMUG00000021842	SEPT1	97	95.575	Macaca_mulatta
MGP_SPRETEiJ_G0031606	Sept1	100	95.862	ENSMNEG00000041695	SEPT1	89	83.967	Macaca_nemestrina
MGP_SPRETEiJ_G0031606	Sept1	100	96.960	ENSMLEG00000039481	SEPT1	87	96.960	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0031606	Sept1	100	97.931	ENSMAUG00000009531	Sept1	100	97.548	Mesocricetus_auratus
MGP_SPRETEiJ_G0031606	Sept1	100	97.241	ENSMICG00000011817	SEPT1	94	95.082	Microcebus_murinus
MGP_SPRETEiJ_G0031606	Sept1	100	97.931	ENSMOCG00000017518	Sept1	100	97.275	Microtus_ochrogaster
MGP_SPRETEiJ_G0031606	Sept1	100	98.780	MGP_CAROLIEiJ_G0030492	Sept1	100	98.780	Mus_caroli
MGP_SPRETEiJ_G0031606	Sept1	100	99.727	ENSMUSG00000000486	Sept1	100	99.727	Mus_musculus
MGP_SPRETEiJ_G0031606	Sept1	100	99.085	MGP_PahariEiJ_G0013702	Sept1	100	99.085	Mus_pahari
MGP_SPRETEiJ_G0031606	Sept1	100	95.862	ENSMLUG00000006749	SEPT1	99	93.716	Myotis_lucifugus
MGP_SPRETEiJ_G0031606	Sept1	100	97.931	ENSNGAG00000021368	Sept1	100	96.185	Nannospalax_galili
MGP_SPRETEiJ_G0031606	Sept1	100	90.345	ENSMEUG00000000492	SEPT1	100	87.705	Notamacropus_eugenii
MGP_SPRETEiJ_G0031606	Sept1	100	92.414	ENSOPRG00000007981	SEPT1	100	91.008	Ochotona_princeps
MGP_SPRETEiJ_G0031606	Sept1	100	93.793	ENSODEG00000014531	SEPT1	100	92.120	Octodon_degus
MGP_SPRETEiJ_G0031606	Sept1	100	89.655	ENSOANG00000005331	SEPT1	100	85.286	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0031606	Sept1	100	97.931	ENSOGAG00000013350	SEPT1	99	96.175	Otolemur_garnettii
MGP_SPRETEiJ_G0031606	Sept1	100	93.878	ENSOARG00000006135	SEPT1	99	94.293	Ovis_aries
MGP_SPRETEiJ_G0031606	Sept1	100	95.862	ENSPPAG00000032680	SEPT1	87	76.567	Pan_paniscus
MGP_SPRETEiJ_G0031606	Sept1	100	95.172	ENSPPRG00000008648	-	100	94.262	Panthera_pardus
MGP_SPRETEiJ_G0031606	Sept1	100	94.483	ENSPTIG00000006718	SEPT1	87	93.831	Panthera_tigris_altaica
MGP_SPRETEiJ_G0031606	Sept1	100	95.862	ENSPTRG00000007998	SEPT1	89	95.640	Pan_troglodytes
MGP_SPRETEiJ_G0031606	Sept1	100	96.960	ENSPANG00000032364	SEPT1	97	96.960	Papio_anubis
MGP_SPRETEiJ_G0031606	Sept1	100	97.931	ENSPEMG00000023616	Sept1	100	97.548	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0031606	Sept1	100	91.034	ENSPCIG00000001537	SEPT1	100	88.556	Phascolarctos_cinereus
MGP_SPRETEiJ_G0031606	Sept1	100	95.172	ENSPPYG00000007270	-	100	94.481	Pongo_abelii
MGP_SPRETEiJ_G0031606	Sept1	100	93.793	ENSPCAG00000009042	SEPT1	100	92.098	Procavia_capensis
MGP_SPRETEiJ_G0031606	Sept1	100	97.241	ENSPCOG00000028121	SEPT1	90	95.095	Propithecus_coquereli
MGP_SPRETEiJ_G0031606	Sept1	100	96.552	ENSPVAG00000008655	SEPT1	100	95.913	Pteropus_vampyrus
MGP_SPRETEiJ_G0031606	Sept1	100	98.621	ENSRNOG00000017804	Sept1	100	98.361	Rattus_norvegicus
MGP_SPRETEiJ_G0031606	Sept1	100	95.862	ENSRBIG00000036580	SEPT1	89	95.095	Rhinopithecus_bieti
MGP_SPRETEiJ_G0031606	Sept1	100	95.862	ENSRROG00000038708	SEPT1	99	95.095	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0031606	Sept1	100	95.862	ENSSBOG00000021733	SEPT1	89	94.550	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0031606	Sept1	100	89.655	ENSSHAG00000006478	SEPT1	99	87.397	Sarcophilus_harrisii
MGP_SPRETEiJ_G0031606	Sept1	100	95.862	ENSSSCG00000007800	SEPT1	100	95.628	Sus_scrofa
MGP_SPRETEiJ_G0031606	Sept1	100	96.552	ENSTTRG00000017272	SEPT1	100	95.095	Tursiops_truncatus
MGP_SPRETEiJ_G0031606	Sept1	100	96.552	ENSUAMG00000027438	SEPT1	99	94.823	Ursus_americanus
MGP_SPRETEiJ_G0031606	Sept1	100	96.552	ENSUMAG00000011345	SEPT1	100	95.095	Ursus_maritimus
MGP_SPRETEiJ_G0031606	Sept1	98	95.070	ENSVVUG00000026116	SEPT1	90	93.750	Vulpes_vulpes