EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0031613 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 14245 bases
Position: chr7:117323467-117337711
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0085823	zf-C2H2	PF00096.26	4e-50	1	9
MGP_SPRETEiJ_P0085823	zf-C2H2	PF00096.26	4e-50	2	9
MGP_SPRETEiJ_P0085823	zf-C2H2	PF00096.26	4e-50	3	9
MGP_SPRETEiJ_P0085823	zf-C2H2	PF00096.26	4e-50	4	9
MGP_SPRETEiJ_P0085823	zf-C2H2	PF00096.26	4e-50	5	9
MGP_SPRETEiJ_P0085823	zf-C2H2	PF00096.26	4e-50	6	9
MGP_SPRETEiJ_P0085823	zf-C2H2	PF00096.26	4e-50	7	9
MGP_SPRETEiJ_P0085823	zf-C2H2	PF00096.26	4e-50	8	9
MGP_SPRETEiJ_P0085823	zf-C2H2	PF00096.26	4e-50	9	9
MGP_SPRETEiJ_P0085823	zf-met	PF12874.7	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0085823	-	2425	-	MGP_SPRETEiJ_P0085823	328 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0031613's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0031613's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0031613	-	79	45.000	MGP_SPRETEiJ_G0028173	Zbtb49	64	48.649
MGP_SPRETEiJ_G0031613	-	84	38.816	MGP_SPRETEiJ_G0025644	Zfp64	69	33.992
MGP_SPRETEiJ_G0031613	-	85	51.220	MGP_SPRETEiJ_G0020852	Zfp251	73	51.220
MGP_SPRETEiJ_G0031613	-	84	41.791	MGP_SPRETEiJ_G0017272	Zfp867	83	41.791
MGP_SPRETEiJ_G0031613	-	88	45.635	MGP_SPRETEiJ_G0019560	Zfp748	92	45.635
MGP_SPRETEiJ_G0031613	-	89	48.000	MGP_SPRETEiJ_G0030423	Zfp94	69	48.000
MGP_SPRETEiJ_G0031613	-	90	44.981	MGP_SPRETEiJ_G0030420	Zfp108	72	46.341
MGP_SPRETEiJ_G0031613	-	84	43.644	MGP_SPRETEiJ_G0032697	Zfp1	64	43.644
MGP_SPRETEiJ_G0031613	-	87	42.969	MGP_SPRETEiJ_G0022052	Zfp945	78	42.969
MGP_SPRETEiJ_G0031613	-	83	40.496	MGP_SPRETEiJ_G0019129	Zkscan4	54	41.564
MGP_SPRETEiJ_G0031613	-	85	47.012	MGP_SPRETEiJ_G0025181	Zfp661	64	47.012
MGP_SPRETEiJ_G0031613	-	100	100.000	MGP_SPRETEiJ_G0031614	-	100	100.000
MGP_SPRETEiJ_G0031613	-	96	47.967	MGP_SPRETEiJ_G0030586	Zfp420	98	47.967
MGP_SPRETEiJ_G0031613	-	79	44.643	MGP_SPRETEiJ_G0017233	Zfp672	90	41.975
MGP_SPRETEiJ_G0031613	-	85	45.385	MGP_SPRETEiJ_G0030415	Zfp112	56	45.385
MGP_SPRETEiJ_G0031613	-	84	43.182	MGP_SPRETEiJ_G0029346	Repin1	91	42.793
MGP_SPRETEiJ_G0031613	-	90	42.920	MGP_SPRETEiJ_G0030526	-	87	42.920
MGP_SPRETEiJ_G0031613	-	87	42.174	MGP_SPRETEiJ_G0030524	Zfp59	83	42.174
MGP_SPRETEiJ_G0031613	-	84	42.478	MGP_SPRETEiJ_G0030525	-	83	42.478
MGP_SPRETEiJ_G0031613	-	90	49.339	MGP_SPRETEiJ_G0030416	Zfp235	74	49.339
MGP_SPRETEiJ_G0031613	-	79	46.748	MGP_SPRETEiJ_G0030417	Zfp114	68	46.748
MGP_SPRETEiJ_G0031613	-	84	39.375	MGP_SPRETEiJ_G0032539	Zfp319	91	37.545
MGP_SPRETEiJ_G0031613	-	84	47.556	MGP_SPRETEiJ_G0030709	-	81	47.556
MGP_SPRETEiJ_G0031613	-	85	46.748	MGP_SPRETEiJ_G0030421	-	99	46.748
MGP_SPRETEiJ_G0031613	-	87	47.321	MGP_SPRETEiJ_G0031612	Zfp768	52	47.872
MGP_SPRETEiJ_G0031613	-	84	47.009	MGP_SPRETEiJ_G0029809	Zfp637	72	44.604
MGP_SPRETEiJ_G0031613	-	89	44.726	MGP_SPRETEiJ_G0030422	Zfp61	53	44.726
MGP_SPRETEiJ_G0031613	-	84	41.985	MGP_SPRETEiJ_G0029467	Prdm5	76	36.803
MGP_SPRETEiJ_G0031613	-	84	43.015	MGP_SPRETEiJ_G0030713	Zfp715	63	43.173
MGP_SPRETEiJ_G0031613	-	90	47.208	MGP_SPRETEiJ_G0030188	Zfp628	61	46.500
MGP_SPRETEiJ_G0031613	-	84	42.157	MGP_SPRETEiJ_G0030453	Zfp574	71	38.136
MGP_SPRETEiJ_G0031613	-	86	44.240	MGP_SPRETEiJ_G0027723	Zbtb17	55	41.532
MGP_SPRETEiJ_G0031613	-	83	35.417	MGP_SPRETEiJ_G0029029	Gtf3a	79	34.657
MGP_SPRETEiJ_G0031613	-	85	39.592	MGP_SPRETEiJ_G0019543	-	68	39.592
MGP_SPRETEiJ_G0031613	-	88	43.320	MGP_SPRETEiJ_G0019544	Zfp759	89	43.320
MGP_SPRETEiJ_G0031613	-	89	42.857	MGP_SPRETEiJ_G0023360	Zfp236	61	47.297
MGP_SPRETEiJ_G0031613	-	89	43.805	MGP_SPRETEiJ_G0022057	Zscan10	78	43.805
MGP_SPRETEiJ_G0031613	-	88	34.831	MGP_SPRETEiJ_G0030196	-	80	34.831

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0031613	-	85	52.000	ENSACAG00000008664	-	68	52.000	Anolis_carolinensis
MGP_SPRETEiJ_G0031613	-	84	44.444	ENSACAG00000024956	-	77	44.444	Anolis_carolinensis
MGP_SPRETEiJ_G0031613	-	91	42.857	ENSACAG00000024898	-	99	42.857	Anolis_carolinensis
MGP_SPRETEiJ_G0031613	-	84	48.571	ENSAMXG00000010805	-	94	48.571	Astyanax_mexicanus
MGP_SPRETEiJ_G0031613	-	84	47.984	ENSAMXG00000034847	-	83	47.984	Astyanax_mexicanus
MGP_SPRETEiJ_G0031613	-	88	52.466	ENSAMXG00000036233	-	89	52.466	Astyanax_mexicanus
MGP_SPRETEiJ_G0031613	-	83	51.452	ENSAMXG00000038636	-	98	51.452	Astyanax_mexicanus
MGP_SPRETEiJ_G0031613	-	84	54.639	ENSAMXG00000032841	-	79	54.639	Astyanax_mexicanus
MGP_SPRETEiJ_G0031613	-	84	52.466	ENSAMXG00000025452	-	94	52.466	Astyanax_mexicanus
MGP_SPRETEiJ_G0031613	-	87	45.113	ENSAMXG00000038536	-	90	45.113	Astyanax_mexicanus
MGP_SPRETEiJ_G0031613	-	85	42.723	ENSAMXG00000035246	-	65	42.723	Astyanax_mexicanus
MGP_SPRETEiJ_G0031613	-	87	47.368	ENSAMXG00000042784	-	96	47.368	Astyanax_mexicanus
MGP_SPRETEiJ_G0031613	-	96	43.348	ENSAMXG00000034344	-	79	43.348	Astyanax_mexicanus
MGP_SPRETEiJ_G0031613	-	87	45.324	ENSAMXG00000042746	-	90	45.324	Astyanax_mexicanus
MGP_SPRETEiJ_G0031613	-	84	43.192	ENSAMXG00000038325	-	92	43.426	Astyanax_mexicanus
MGP_SPRETEiJ_G0031613	-	86	44.922	ENSBTAG00000038322	-	77	44.922	Bos_taurus
MGP_SPRETEiJ_G0031613	-	77	38.824	ENSCPBG00000008580	-	75	38.824	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0031613	-	86	45.290	ENSCPBG00000001526	-	83	47.244	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0031613	-	94	35.777	ENSCPBG00000013652	-	68	39.604	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0031613	-	88	38.361	ENSCSAVG00000010960	-	100	37.681	Ciona_savignyi
MGP_SPRETEiJ_G0031613	-	98	44.177	ENSDNOG00000047495	-	77	44.177	Dasypus_novemcinctus
MGP_SPRETEiJ_G0031613	-	87	40.161	ENSEBUG00000014717	-	72	40.161	Eptatretus_burgeri
MGP_SPRETEiJ_G0031613	-	84	41.885	ENSEBUG00000005264	-	72	41.885	Eptatretus_burgeri
MGP_SPRETEiJ_G0031613	-	85	44.444	ENSEBUG00000011694	-	97	44.444	Eptatretus_burgeri
MGP_SPRETEiJ_G0031613	-	85	43.023	ENSEBUG00000008306	-	79	43.023	Eptatretus_burgeri
MGP_SPRETEiJ_G0031613	-	87	35.401	ENSEBUG00000013875	-	82	35.401	Eptatretus_burgeri
MGP_SPRETEiJ_G0031613	-	88	40.809	ENSEBUG00000002075	-	77	41.071	Eptatretus_burgeri
MGP_SPRETEiJ_G0031613	-	87	44.177	ENSEBUG00000015837	-	81	44.177	Eptatretus_burgeri
MGP_SPRETEiJ_G0031613	-	86	45.211	ENSEBUG00000012919	-	77	45.211	Eptatretus_burgeri
MGP_SPRETEiJ_G0031613	-	84	44.061	ENSEBUG00000011435	-	81	44.061	Eptatretus_burgeri
MGP_SPRETEiJ_G0031613	-	86	44.177	ENSEASG00005004469	-	70	44.177	Equus_asinus_asinus
MGP_SPRETEiJ_G0031613	-	86	41.228	ENSGMOG00000018506	-	100	41.228	Gadus_morhua
MGP_SPRETEiJ_G0031613	-	85	48.230	ENSGALG00000053507	-	78	48.230	Gallus_gallus
MGP_SPRETEiJ_G0031613	-	86	44.141	ENSGALG00000054325	-	98	44.141	Gallus_gallus
MGP_SPRETEiJ_G0031613	-	84	47.012	ENSGALG00000055127	-	72	47.012	Gallus_gallus
MGP_SPRETEiJ_G0031613	-	85	42.972	ENSGALG00000049609	-	56	42.972	Gallus_gallus
MGP_SPRETEiJ_G0031613	-	86	46.124	ENSGALG00000044069	-	56	46.341	Gallus_gallus
MGP_SPRETEiJ_G0031613	-	85	45.174	ENSGALG00000046336	-	98	45.174	Gallus_gallus
MGP_SPRETEiJ_G0031613	-	84	43.571	ENSGACG00000006283	-	78	43.571	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0031613	-	91	44.758	ENSGAGG00000011366	-	93	44.758	Gopherus_agassizii
MGP_SPRETEiJ_G0031613	-	84	44.583	ENSGAGG00000018885	-	65	44.583	Gopherus_agassizii
MGP_SPRETEiJ_G0031613	-	86	41.924	ENSGAGG00000011399	-	86	47.807	Gopherus_agassizii
MGP_SPRETEiJ_G0031613	-	79	44.395	ENSHCOG00000018201	-	81	44.395	Hippocampus_comes
MGP_SPRETEiJ_G0031613	-	84	45.490	ENSIPUG00000021515	-	85	45.490	Ictalurus_punctatus
MGP_SPRETEiJ_G0031613	-	86	49.593	ENSIPUG00000015468	-	80	49.593	Ictalurus_punctatus
MGP_SPRETEiJ_G0031613	-	93	45.495	ENSJJAG00000023633	Zfp672	99	44.286	Jaculus_jaculus
MGP_SPRETEiJ_G0031613	-	86	39.485	ENSLACG00000009005	-	100	39.485	Latimeria_chalumnae
MGP_SPRETEiJ_G0031613	-	79	38.057	ENSLACG00000005264	-	97	38.057	Latimeria_chalumnae
MGP_SPRETEiJ_G0031613	-	87	45.045	ENSLACG00000022211	-	76	45.045	Latimeria_chalumnae
MGP_SPRETEiJ_G0031613	-	84	42.636	ENSLOCG00000017864	-	99	42.471	Lepisosteus_oculatus
MGP_SPRETEiJ_G0031613	-	86	48.444	ENSMGAG00000013362	-	100	48.444	Meleagris_gallopavo
MGP_SPRETEiJ_G0031613	-	83	43.933	ENSMAUG00000009945	Zfp672	89	42.578	Mesocricetus_auratus
MGP_SPRETEiJ_G0031613	-	83	44.531	ENSMMOG00000003923	-	84	44.531	Mola_mola
MGP_SPRETEiJ_G0031613	-	86	45.344	ENSMODG00000010532	-	85	45.344	Monodelphis_domestica
MGP_SPRETEiJ_G0031613	-	84	45.344	ENSMODG00000001880	-	80	45.344	Monodelphis_domestica
MGP_SPRETEiJ_G0031613	-	88	86.989	MGP_CAROLIEiJ_G0030502	-	67	86.989	Mus_caroli
MGP_SPRETEiJ_G0031613	-	79	44.643	MGP_CAROLIEiJ_G0016391	Zfp672	90	43.210	Mus_caroli
MGP_SPRETEiJ_G0031613	-	94	75.325	ENSMUSG00000030823	9130019O22Rik	75	75.325	Mus_musculus
MGP_SPRETEiJ_G0031613	-	80	44.444	ENSNGAG00000015777	Zim1	61	43.860	Nannospalax_galili
MGP_SPRETEiJ_G0031613	-	87	42.000	ENSNBRG00000000708	-	90	42.000	Neolamprologus_brichardi
MGP_SPRETEiJ_G0031613	-	83	40.336	ENSNBRG00000007276	-	60	40.336	Neolamprologus_brichardi
MGP_SPRETEiJ_G0031613	-	83	49.167	ENSORLG00020001922	-	58	43.860	Oryzias_latipes_hni
MGP_SPRETEiJ_G0031613	-	78	47.107	ENSOMEG00000001598	-	62	44.348	Oryzias_melastigma
MGP_SPRETEiJ_G0031613	-	84	47.727	ENSPSIG00000010328	-	65	47.727	Pelodiscus_sinensis
MGP_SPRETEiJ_G0031613	-	83	49.167	ENSPSIG00000000672	-	99	44.483	Pelodiscus_sinensis
MGP_SPRETEiJ_G0031613	-	85	40.830	ENSPSIG00000006586	-	100	40.830	Pelodiscus_sinensis
MGP_SPRETEiJ_G0031613	-	84	44.966	ENSPSIG00000006790	-	91	44.966	Pelodiscus_sinensis
MGP_SPRETEiJ_G0031613	-	84	54.500	ENSPSIG00000010248	-	65	54.500	Pelodiscus_sinensis
MGP_SPRETEiJ_G0031613	-	84	48.413	ENSPSIG00000004502	-	54	48.413	Pelodiscus_sinensis
MGP_SPRETEiJ_G0031613	-	84	44.061	ENSPSIG00000003152	-	79	44.061	Pelodiscus_sinensis
MGP_SPRETEiJ_G0031613	-	84	52.232	ENSPSIG00000013021	-	75	52.232	Pelodiscus_sinensis
MGP_SPRETEiJ_G0031613	-	75	51.923	ENSPSIG00000005672	-	73	51.923	Pelodiscus_sinensis
MGP_SPRETEiJ_G0031613	-	89	45.833	ENSPSIG00000012650	-	86	45.290	Pelodiscus_sinensis
MGP_SPRETEiJ_G0031613	-	84	48.018	ENSPSIG00000005603	-	68	48.018	Pelodiscus_sinensis
MGP_SPRETEiJ_G0031613	-	84	49.187	ENSPSIG00000016380	-	68	51.429	Pelodiscus_sinensis
MGP_SPRETEiJ_G0031613	-	84	49.187	ENSPSIG00000015459	-	75	49.187	Pelodiscus_sinensis
MGP_SPRETEiJ_G0031613	-	90	43.478	ENSPREG00000002642	-	91	43.478	Poecilia_reticulata
MGP_SPRETEiJ_G0031613	-	84	44.355	ENSPNYG00000015486	-	50	44.355	Pundamilia_nyererei
MGP_SPRETEiJ_G0031613	-	84	47.926	ENSPNAG00000018395	-	60	47.926	Pygocentrus_nattereri
MGP_SPRETEiJ_G0031613	-	84	50.254	ENSPNAG00000000088	-	82	50.254	Pygocentrus_nattereri
MGP_SPRETEiJ_G0031613	-	79	45.495	ENSRNOG00000002713	Zfp672	89	42.126	Rattus_norvegicus
MGP_SPRETEiJ_G0031613	-	85	41.634	ENSSHAG00000018106	-	75	41.577	Sarcophilus_harrisii
MGP_SPRETEiJ_G0031613	-	84	44.574	ENSSFOG00015019818	-	83	44.141	Scleropages_formosus
MGP_SPRETEiJ_G0031613	-	88	38.328	ENSSMAG00000004252	-	84	38.328	Scophthalmus_maximus
MGP_SPRETEiJ_G0031613	-	84	45.575	ENSSPUG00000010016	-	84	46.667	Sphenodon_punctatus
MGP_SPRETEiJ_G0031613	-	84	49.474	ENSSPUG00000004366	-	59	46.457	Sphenodon_punctatus
MGP_SPRETEiJ_G0031613	-	83	47.706	ENSSPAG00000021653	-	79	45.045	Stegastes_partitus
MGP_SPRETEiJ_G0031613	-	84	51.887	ENSTGUG00000018351	-	100	51.887	Taeniopygia_guttata
MGP_SPRETEiJ_G0031613	-	84	48.387	ENSTGUG00000015210	-	99	50.202	Taeniopygia_guttata
MGP_SPRETEiJ_G0031613	-	86	43.860	ENSTRUG00000022066	-	88	41.615	Takifugu_rubripes
MGP_SPRETEiJ_G0031613	-	84	43.295	ENSXETG00000031192	-	100	43.295	Xenopus_tropicalis
MGP_SPRETEiJ_G0031613	-	84	47.739	ENSXCOG00000006553	-	86	46.502	Xiphophorus_couchianus
MGP_SPRETEiJ_G0031613	-	84	42.424	ENSXMAG00000026680	-	82	42.424	Xiphophorus_maculatus