EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0031614 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 2905 bases
Position: chr7:117334816-117337720
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0085824	zf-C2H2	PF00096.26	4e-50	1	9
MGP_SPRETEiJ_P0085824	zf-C2H2	PF00096.26	4e-50	2	9
MGP_SPRETEiJ_P0085824	zf-C2H2	PF00096.26	4e-50	3	9
MGP_SPRETEiJ_P0085824	zf-C2H2	PF00096.26	4e-50	4	9
MGP_SPRETEiJ_P0085824	zf-C2H2	PF00096.26	4e-50	5	9
MGP_SPRETEiJ_P0085824	zf-C2H2	PF00096.26	4e-50	6	9
MGP_SPRETEiJ_P0085824	zf-C2H2	PF00096.26	4e-50	7	9
MGP_SPRETEiJ_P0085824	zf-C2H2	PF00096.26	4e-50	8	9
MGP_SPRETEiJ_P0085824	zf-C2H2	PF00096.26	4e-50	9	9
MGP_SPRETEiJ_P0085824	zf-met	PF12874.7	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0085824	-	2257	-	MGP_SPRETEiJ_P0085824	328 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0031614's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0031614's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0031614	-	79	44.643	MGP_SPRETEiJ_G0017233	Zfp672	90	41.975
MGP_SPRETEiJ_G0031614	-	84	43.015	MGP_SPRETEiJ_G0030713	Zfp715	63	43.173
MGP_SPRETEiJ_G0031614	-	90	47.208	MGP_SPRETEiJ_G0030188	Zfp628	61	46.500
MGP_SPRETEiJ_G0031614	-	84	41.791	MGP_SPRETEiJ_G0017272	Zfp867	83	41.791
MGP_SPRETEiJ_G0031614	-	86	44.240	MGP_SPRETEiJ_G0027723	Zbtb17	55	41.532
MGP_SPRETEiJ_G0031614	-	84	39.375	MGP_SPRETEiJ_G0032539	Zfp319	91	37.545
MGP_SPRETEiJ_G0031614	-	88	43.320	MGP_SPRETEiJ_G0019544	Zfp759	89	43.320
MGP_SPRETEiJ_G0031614	-	84	38.816	MGP_SPRETEiJ_G0025644	Zfp64	69	33.992
MGP_SPRETEiJ_G0031614	-	84	47.556	MGP_SPRETEiJ_G0030709	-	81	47.556
MGP_SPRETEiJ_G0031614	-	89	42.857	MGP_SPRETEiJ_G0023360	Zfp236	61	47.297
MGP_SPRETEiJ_G0031614	-	85	47.012	MGP_SPRETEiJ_G0025181	Zfp661	64	47.012
MGP_SPRETEiJ_G0031614	-	88	45.635	MGP_SPRETEiJ_G0019560	Zfp748	92	45.635
MGP_SPRETEiJ_G0031614	-	85	45.385	MGP_SPRETEiJ_G0030415	Zfp112	56	45.385
MGP_SPRETEiJ_G0031614	-	79	46.748	MGP_SPRETEiJ_G0030417	Zfp114	68	46.748
MGP_SPRETEiJ_G0031614	-	90	49.339	MGP_SPRETEiJ_G0030416	Zfp235	74	49.339
MGP_SPRETEiJ_G0031614	-	87	42.969	MGP_SPRETEiJ_G0022052	Zfp945	78	42.969
MGP_SPRETEiJ_G0031614	-	79	45.000	MGP_SPRETEiJ_G0028173	Zbtb49	64	48.649
MGP_SPRETEiJ_G0031614	-	87	47.321	MGP_SPRETEiJ_G0031612	Zfp768	52	47.872
MGP_SPRETEiJ_G0031614	-	100	100.000	MGP_SPRETEiJ_G0031613	-	100	100.000
MGP_SPRETEiJ_G0031614	-	96	47.967	MGP_SPRETEiJ_G0030586	Zfp420	98	47.967
MGP_SPRETEiJ_G0031614	-	90	44.981	MGP_SPRETEiJ_G0030420	Zfp108	72	46.341
MGP_SPRETEiJ_G0031614	-	85	46.748	MGP_SPRETEiJ_G0030421	-	99	46.748
MGP_SPRETEiJ_G0031614	-	89	44.726	MGP_SPRETEiJ_G0030422	Zfp61	53	44.726
MGP_SPRETEiJ_G0031614	-	89	48.000	MGP_SPRETEiJ_G0030423	Zfp94	69	48.000
MGP_SPRETEiJ_G0031614	-	84	42.478	MGP_SPRETEiJ_G0030525	-	83	42.478
MGP_SPRETEiJ_G0031614	-	90	42.920	MGP_SPRETEiJ_G0030526	-	87	42.920
MGP_SPRETEiJ_G0031614	-	84	43.644	MGP_SPRETEiJ_G0032697	Zfp1	64	43.644
MGP_SPRETEiJ_G0031614	-	84	42.157	MGP_SPRETEiJ_G0030453	Zfp574	71	38.136
MGP_SPRETEiJ_G0031614	-	87	42.174	MGP_SPRETEiJ_G0030524	Zfp59	83	42.174
MGP_SPRETEiJ_G0031614	-	84	41.985	MGP_SPRETEiJ_G0029467	Prdm5	76	36.803
MGP_SPRETEiJ_G0031614	-	84	43.182	MGP_SPRETEiJ_G0029346	Repin1	91	42.793
MGP_SPRETEiJ_G0031614	-	85	51.220	MGP_SPRETEiJ_G0020852	Zfp251	73	51.220
MGP_SPRETEiJ_G0031614	-	89	43.805	MGP_SPRETEiJ_G0022057	Zscan10	78	43.805
MGP_SPRETEiJ_G0031614	-	85	39.592	MGP_SPRETEiJ_G0019543	-	68	39.592
MGP_SPRETEiJ_G0031614	-	84	47.009	MGP_SPRETEiJ_G0029809	Zfp637	72	44.604
MGP_SPRETEiJ_G0031614	-	83	40.496	MGP_SPRETEiJ_G0019129	Zkscan4	54	41.564
MGP_SPRETEiJ_G0031614	-	83	35.417	MGP_SPRETEiJ_G0029029	Gtf3a	79	34.657
MGP_SPRETEiJ_G0031614	-	88	34.831	MGP_SPRETEiJ_G0030196	-	80	34.831

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0031614	-	88	86.989	MGP_CAROLIEiJ_G0030501	Zfp764	67	86.989	Mus_caroli
MGP_SPRETEiJ_G0031614	-	100	96.108	ENSMUSG00000078580	E430018J23Rik	72	96.108	Mus_musculus
MGP_SPRETEiJ_G0031614	-	99	86.667	MGP_PahariEiJ_G0013708	-	72	86.667	Mus_pahari
MGP_SPRETEiJ_G0031614	-	99	86.667	MGP_PahariEiJ_G0013709	-	72	86.667	Mus_pahari