EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0031633 (Gene tree)
Gene ID: -
Gene Symbol: Setd1a
Alias: KMT2F
Full Name: SET domain containing 1A
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 24656 bases
Position: chr7:117736949-117761604
Accession: 2446244
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0085927	RRM_1	PF00076.22	1.6e-06	1	1
MGP_SPRETEiJ_P0085926	RRM_1	PF00076.22	2.3e-06	1	1
MGP_SPRETEiJ_P0085925	RRM_1	PF00076.22	3e-05	1	1
MGP_SPRETEiJ_P0085928	RRM_1	PF00076.22	3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0085929	-	314	-	MGP_SPRETEiJ_P0085929	70 (aa)	-	UPI0000DBED8A
MGP_SPRETEiJ_T0085928	-	5954	-	MGP_SPRETEiJ_P0085928	1726 (aa)	-	-
MGP_SPRETEiJ_T0085925	-	6515	-	MGP_SPRETEiJ_P0085925	1726 (aa)	-	-
MGP_SPRETEiJ_T0085927	-	727	-	MGP_SPRETEiJ_P0085927	196 (aa)	-	-
MGP_SPRETEiJ_T0085926	-	916	-	MGP_SPRETEiJ_P0085926	247 (aa)	-	-
MGP_SPRETEiJ_T0085930	-	389	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0031633's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0031633's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0031633	Setd1a	94	96.104	ENSAMEG00000007540	-	84	91.935	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0031633	Setd1a	100	71.574	ENSATEG00000022798	setd1a	53	81.081	Anabas_testudineus
MGP_SPRETEiJ_G0031633	Setd1a	100	77.551	ENSACAG00000007606	-	75	60.139	Anolis_carolinensis
MGP_SPRETEiJ_G0031633	Setd1a	100	97.959	ENSANAG00000021698	-	100	83.986	Aotus_nancymaae
MGP_SPRETEiJ_G0031633	Setd1a	100	72.589	ENSACLG00000024747	setd1a	52	81.757	Astatotilapia_calliptera
MGP_SPRETEiJ_G0031633	Setd1a	100	97.959	ENSTSYG00000014425	-	100	85.202	Carlito_syrichta
MGP_SPRETEiJ_G0031633	Setd1a	98	84.574	ENSCAPG00000006491	-	94	90.937	Cavia_aperea
MGP_SPRETEiJ_G0031633	Setd1a	100	78.173	ENSCPBG00000010830	-	95	60.884	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0031633	Setd1a	100	97.959	ENSCANG00000038478	-	100	79.920	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0031633	Setd1a	100	70.051	ENSDARG00000060030	setd1a	52	82.770	Danio_rerio
MGP_SPRETEiJ_G0031633	Setd1a	100	97.959	ENSDNOG00000025514	-	98	88.264	Dasypus_novemcinctus
MGP_SPRETEiJ_G0031633	Setd1a	100	97.959	ENSDORG00000010637	-	100	96.356	Dipodomys_ordii
MGP_SPRETEiJ_G0031633	Setd1a	100	93.878	ENSETEG00000014170	-	63	80.455	Echinops_telfairi
MGP_SPRETEiJ_G0031633	Setd1a	100	97.449	ENSEASG00005011195	-	100	87.110	Equus_asinus_asinus
MGP_SPRETEiJ_G0031633	Setd1a	100	97.959	ENSFDAG00000001621	-	99	96.748	Fukomys_damarensis
MGP_SPRETEiJ_G0031633	Setd1a	100	71.574	ENSFHEG00000023258	setd1a	64	75.170	Fundulus_heteroclitus
MGP_SPRETEiJ_G0031633	Setd1a	100	78.680	ENSGAGG00000010781	-	68	72.308	Gopherus_agassizii
MGP_SPRETEiJ_G0031633	Setd1a	100	72.589	ENSHBUG00000008893	setd1a	53	81.419	Haplochromis_burtoni
MGP_SPRETEiJ_G0031633	Setd1a	100	97.959	ENSHGLG00000014238	-	100	87.060	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0031633	Setd1a	100	97.959	ENSHGLG00100010551	-	98	95.635	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0031633	Setd1a	100	69.543	ENSIPUG00000007413	setd1a	50	81.081	Ictalurus_punctatus
MGP_SPRETEiJ_G0031633	Setd1a	100	98.980	ENSJJAG00000015314	-	100	95.951	Jaculus_jaculus
MGP_SPRETEiJ_G0031633	Setd1a	100	97.959	ENSMNEG00000032572	-	100	85.418	Macaca_nemestrina
MGP_SPRETEiJ_G0031633	Setd1a	100	71.574	ENSMAMG00000021851	setd1a	69	76.014	Mastacembelus_armatus
MGP_SPRETEiJ_G0031633	Setd1a	100	72.589	ENSMZEG00005023141	setd1a	53	81.757	Maylandia_zebra
MGP_SPRETEiJ_G0031633	Setd1a	100	98.980	ENSMAUG00000008959	-	73	94.277	Mesocricetus_auratus
MGP_SPRETEiJ_G0031633	Setd1a	100	71.574	ENSMMOG00000016992	setd1a	63	80.068	Mola_mola
MGP_SPRETEiJ_G0031633	Setd1a	99	85.204	ENSMODG00000001726	-	99	76.093	Monodelphis_domestica
MGP_SPRETEiJ_G0031633	Setd1a	100	98.980	MGP_CAROLIEiJ_G0030519	-	100	98.980	Mus_caroli
MGP_SPRETEiJ_G0031633	Setd1a	100	99.595	ENSMUSG00000042308	Setd1a	100	99.595	Mus_musculus
MGP_SPRETEiJ_G0031633	Setd1a	100	98.980	MGP_PahariEiJ_G0013726	-	100	98.980	Mus_pahari
MGP_SPRETEiJ_G0031633	Setd1a	100	97.959	ENSMPUG00000011867	-	68	97.251	Mustela_putorius_furo
MGP_SPRETEiJ_G0031633	Setd1a	92	97.778	ENSMLUG00000027303	-	79	85.343	Myotis_lucifugus
MGP_SPRETEiJ_G0031633	Setd1a	100	98.980	ENSNGAG00000012923	-	100	96.356	Nannospalax_galili
MGP_SPRETEiJ_G0031633	Setd1a	100	72.589	ENSNBRG00000004760	setd1a	52	78.378	Neolamprologus_brichardi
MGP_SPRETEiJ_G0031633	Setd1a	100	86.225	ENSNLEG00000016072	-	100	86.678	Nomascus_leucogenys
MGP_SPRETEiJ_G0031633	Setd1a	99	84.694	ENSMEUG00000003396	-	100	76.136	Notamacropus_eugenii
MGP_SPRETEiJ_G0031633	Setd1a	100	97.959	ENSOPRG00000016034	-	100	85.607	Ochotona_princeps
MGP_SPRETEiJ_G0031633	Setd1a	100	97.449	ENSODEG00000014550	-	100	95.951	Octodon_degus
MGP_SPRETEiJ_G0031633	Setd1a	100	87.817	ENSOANG00000013155	-	54	91.837	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0031633	Setd1a	100	97.449	ENSOARG00000008207	-	64	81.152	Ovis_aries
MGP_SPRETEiJ_G0031633	Setd1a	100	97.959	ENSPPAG00000030470	-	51	95.876	Pan_paniscus
MGP_SPRETEiJ_G0031633	Setd1a	100	97.959	ENSPTIG00000010871	-	99	96.226	Panthera_tigris_altaica
MGP_SPRETEiJ_G0031633	Setd1a	100	78.680	ENSPSIG00000005027	-	57	81.308	Pelodiscus_sinensis
MGP_SPRETEiJ_G0031633	Setd1a	99	84.694	ENSPCIG00000016725	-	100	74.801	Phascolarctos_cinereus
MGP_SPRETEiJ_G0031633	Setd1a	100	71.212	ENSPFOG00000013669	setd1a	55	82.095	Poecilia_formosa
MGP_SPRETEiJ_G0031633	Setd1a	100	71.574	ENSPLAG00000009294	setd1a	55	82.095	Poecilia_latipinna
MGP_SPRETEiJ_G0031633	Setd1a	100	97.959	ENSPPYG00000007296	-	100	100.000	Pongo_abelii
MGP_SPRETEiJ_G0031633	Setd1a	79	97.449	ENSPCAG00000014351	-	85	97.449	Procavia_capensis
MGP_SPRETEiJ_G0031633	Setd1a	100	96.939	ENSPVAG00000011049	-	95	96.714	Pteropus_vampyrus
MGP_SPRETEiJ_G0031633	Setd1a	100	72.081	ENSPNYG00000014139	setd1a	52	81.757	Pundamilia_nyererei
MGP_SPRETEiJ_G0031633	Setd1a	100	97.959	ENSRBIG00000033047	-	100	95.563	Rhinopithecus_bieti
MGP_SPRETEiJ_G0031633	Setd1a	100	97.959	ENSRROG00000040062	-	99	95.876	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0031633	Setd1a	99	85.204	ENSSHAG00000010784	-	100	75.827	Sarcophilus_harrisii
MGP_SPRETEiJ_G0031633	Setd1a	100	70.558	ENSSFOG00015007013	setd1a	51	81.333	Scleropages_formosus
MGP_SPRETEiJ_G0031633	Setd1a	80	86.997	ENSSARG00000005591	-	89	86.997	Sorex_araneus
MGP_SPRETEiJ_G0031633	Setd1a	81	96.020	ENSTBEG00000009714	-	69	100.000	Tupaia_belangeri
MGP_SPRETEiJ_G0031633	Setd1a	100	97.959	ENSUMAG00000013935	-	91	96.825	Ursus_maritimus
MGP_SPRETEiJ_G0031633	Setd1a	100	97.959	ENSVVUG00000027687	-	96	87.970	Vulpes_vulpes
MGP_SPRETEiJ_G0031633	Setd1a	98	67.876	ENSXETG00000001921	setd1a	61	79.412	Xenopus_tropicalis
MGP_SPRETEiJ_G0031633	Setd1a	100	71.574	ENSXCOG00000017585	setd1a	51	79.530	Xiphophorus_couchianus
MGP_SPRETEiJ_G0031633	Setd1a	100	71.574	ENSXMAG00000008021	setd1a	51	81.757	Xiphophorus_maculatus