EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0032079 (Gene tree)
Gene ID: -
Gene Symbol: Wrn
Alias: -
Full Name: Werner syndrome RecQ like helicase
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 171316 bases
Position: chr8:30778819-30950134
Accession: 109635
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0087611	HRDC	PF00570.23	7.4e-14	1	1
MGP_SPRETEiJ_P0087612	HRDC	PF00570.23	7.4e-14	1	1
MGP_SPRETEiJ_P0087611	DEAD	PF00270.29	2.4e-15	1	1
MGP_SPRETEiJ_P0087612	DEAD	PF00270.29	2.4e-15	1	1
MGP_SPRETEiJ_P0087611	DNA_pol_A_exo1	PF01612.20	3.3e-35	1	1
MGP_SPRETEiJ_P0087612	DNA_pol_A_exo1	PF01612.20	3.3e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0087611	-	6352	-	MGP_SPRETEiJ_P0087611	1401 (aa)	-	-
MGP_SPRETEiJ_T0087610	-	1105	-	MGP_SPRETEiJ_P0087610	326 (aa)	-	-
MGP_SPRETEiJ_T0087612	-	6242	-	MGP_SPRETEiJ_P0087612	1401 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0032079's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0032079's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0032079	Wrn	100	69.944	ENSG00000165392	WRN	99	70.223	Homo_sapiens
MGP_SPRETEiJ_G0032079	Wrn	81	70.303	ENSAMEG00000000475	-	97	70.404	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0032079	Wrn	93	56.085	ENSAPLG00000001616	WRN	91	56.368	Anas_platyrhynchos
MGP_SPRETEiJ_G0032079	Wrn	94	51.301	ENSACAG00000003109	WRN	100	51.596	Anolis_carolinensis
MGP_SPRETEiJ_G0032079	Wrn	100	68.204	ENSANAG00000032806	WRN	98	71.601	Aotus_nancymaae
MGP_SPRETEiJ_G0032079	Wrn	94	48.909	ENSAMXG00000010066	wrn	89	49.135	Astyanax_mexicanus
MGP_SPRETEiJ_G0032079	Wrn	99	68.737	ENSBTAG00000021592	WRN	99	68.737	Bos_taurus
MGP_SPRETEiJ_G0032079	Wrn	57	32.919	WBGene00006944	wrn-1	73	32.919	Caenorhabditis_elegans
MGP_SPRETEiJ_G0032079	Wrn	100	70.482	ENSCJAG00000012511	WRN	99	70.551	Callithrix_jacchus
MGP_SPRETEiJ_G0032079	Wrn	100	70.630	ENSCAFG00000006410	WRN	97	70.630	Canis_familiaris
MGP_SPRETEiJ_G0032079	Wrn	100	68.652	ENSCAFG00020001236	WRN	99	68.652	Canis_lupus_dingo
MGP_SPRETEiJ_G0032079	Wrn	99	68.929	ENSCHIG00000014991	WRN	99	68.857	Capra_hircus
MGP_SPRETEiJ_G0032079	Wrn	99	71.408	ENSTSYG00000012689	WRN	99	71.337	Carlito_syrichta
MGP_SPRETEiJ_G0032079	Wrn	90	65.103	ENSCAPG00000016803	WRN	98	65.982	Cavia_aperea
MGP_SPRETEiJ_G0032079	Wrn	99	69.081	ENSCPOG00000002943	WRN	98	69.279	Cavia_porcellus
MGP_SPRETEiJ_G0032079	Wrn	100	71.369	ENSCCAG00000023793	WRN	99	71.369	Cebus_capucinus
MGP_SPRETEiJ_G0032079	Wrn	99	71.724	ENSCATG00000040557	WRN	99	72.975	Cercocebus_atys
MGP_SPRETEiJ_G0032079	Wrn	96	73.017	ENSCLAG00000000817	WRN	99	69.952	Chinchilla_lanigera
MGP_SPRETEiJ_G0032079	Wrn	96	71.314	ENSCSAG00000015810	WRN	99	71.098	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0032079	Wrn	70	86.034	ENSCHOG00000008966	WRN	74	86.034	Choloepus_hoffmanni
MGP_SPRETEiJ_G0032079	Wrn	95	57.692	ENSCPBG00000013421	WRN	90	58.024	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0032079	Wrn	60	40.324	ENSCING00000002232	-	70	40.324	Ciona_intestinalis
MGP_SPRETEiJ_G0032079	Wrn	100	70.391	ENSCANG00000037137	WRN	99	70.391	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0032079	Wrn	100	83.250	ENSCGRG00001016491	Wrn	100	83.535	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0032079	Wrn	83	82.226	ENSCGRG00000016821	Wrn	100	82.571	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0032079	Wrn	94	47.160	ENSDARG00000098211	wrn	90	47.160	Danio_rerio
MGP_SPRETEiJ_G0032079	Wrn	95	66.499	ENSDNOG00000008481	WRN	100	66.499	Dasypus_novemcinctus
MGP_SPRETEiJ_G0032079	Wrn	100	69.317	ENSDORG00000002696	Wrn	100	69.740	Dipodomys_ordii
MGP_SPRETEiJ_G0032079	Wrn	79	81.643	ENSETEG00000019854	WRN	79	81.643	Echinops_telfairi
MGP_SPRETEiJ_G0032079	Wrn	97	67.398	ENSEASG00005016813	WRN	99	77.049	Equus_asinus_asinus
MGP_SPRETEiJ_G0032079	Wrn	100	68.116	ENSECAG00000000110	WRN	99	68.116	Equus_caballus
MGP_SPRETEiJ_G0032079	Wrn	82	65.438	ENSEEUG00000004926	WRN	90	65.438	Erinaceus_europaeus
MGP_SPRETEiJ_G0032079	Wrn	94	47.247	ENSELUG00000017817	wrn	94	55.340	Esox_lucius
MGP_SPRETEiJ_G0032079	Wrn	100	66.434	ENSFCAG00000024759	WRN	99	66.434	Felis_catus
MGP_SPRETEiJ_G0032079	Wrn	100	70.934	ENSFDAG00000008637	WRN	99	70.934	Fukomys_damarensis
MGP_SPRETEiJ_G0032079	Wrn	95	55.915	ENSGALG00000040909	WRN	89	56.209	Gallus_gallus
MGP_SPRETEiJ_G0032079	Wrn	99	54.856	ENSGAGG00000022647	WRN	99	54.918	Gopherus_agassizii
MGP_SPRETEiJ_G0032079	Wrn	100	71.622	ENSGGOG00000022154	WRN	99	71.764	Gorilla_gorilla
MGP_SPRETEiJ_G0032079	Wrn	100	72.404	ENSHGLG00000003638	WRN	100	72.333	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0032079	Wrn	95	47.168	ENSIPUG00000002090	wrn	92	47.168	Ictalurus_punctatus
MGP_SPRETEiJ_G0032079	Wrn	100	71.735	ENSSTOG00000013599	WRN	99	71.735	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0032079	Wrn	100	71.368	ENSJJAG00000015655	Wrn	100	71.368	Jaculus_jaculus
MGP_SPRETEiJ_G0032079	Wrn	98	48.344	ENSLACG00000001569	-	92	48.837	Latimeria_chalumnae
MGP_SPRETEiJ_G0032079	Wrn	94	51.675	ENSLOCG00000010792	wrn	93	50.110	Lepisosteus_oculatus
MGP_SPRETEiJ_G0032079	Wrn	100	71.398	ENSLAFG00000004434	WRN	100	71.398	Loxodonta_africana
MGP_SPRETEiJ_G0032079	Wrn	99	71.357	ENSMFAG00000043428	WRN	99	71.714	Macaca_fascicularis
MGP_SPRETEiJ_G0032079	Wrn	100	69.902	ENSMMUG00000022655	WRN	99	70.251	Macaca_mulatta
MGP_SPRETEiJ_G0032079	Wrn	100	70.412	ENSMNEG00000032617	WRN	99	70.482	Macaca_nemestrina
MGP_SPRETEiJ_G0032079	Wrn	99	72.080	ENSMLEG00000038296	WRN	99	72.151	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0032079	Wrn	94	56.600	ENSMGAG00000004960	WRN	88	56.994	Meleagris_gallopavo
MGP_SPRETEiJ_G0032079	Wrn	100	84.034	ENSMAUG00000016235	Wrn	100	84.248	Mesocricetus_auratus
MGP_SPRETEiJ_G0032079	Wrn	100	67.697	ENSMICG00000010630	WRN	99	67.767	Microcebus_murinus
MGP_SPRETEiJ_G0032079	Wrn	100	82.026	ENSMOCG00000013972	Wrn	100	82.026	Microtus_ochrogaster
MGP_SPRETEiJ_G0032079	Wrn	99	55.983	ENSMODG00000018997	WRN	99	56.410	Monodelphis_domestica
MGP_SPRETEiJ_G0032079	Wrn	100	97.716	MGP_CAROLIEiJ_G0030961	Wrn	100	97.716	Mus_caroli
MGP_SPRETEiJ_G0032079	Wrn	100	98.858	ENSMUSG00000031583	Wrn	100	98.858	Mus_musculus
MGP_SPRETEiJ_G0032079	Wrn	100	93.647	MGP_PahariEiJ_G0021430	Wrn	100	93.647	Mus_pahari
MGP_SPRETEiJ_G0032079	Wrn	100	68.914	ENSMPUG00000010201	WRN	99	68.914	Mustela_putorius_furo
MGP_SPRETEiJ_G0032079	Wrn	99	71.255	ENSMLUG00000005863	WRN	99	71.255	Myotis_lucifugus
MGP_SPRETEiJ_G0032079	Wrn	99	76.940	ENSNGAG00000018413	Wrn	99	76.940	Nannospalax_galili
MGP_SPRETEiJ_G0032079	Wrn	100	71.146	ENSNLEG00000012006	WRN	99	71.358	Nomascus_leucogenys
MGP_SPRETEiJ_G0032079	Wrn	74	62.174	ENSMEUG00000008271	-	75	62.174	Notamacropus_eugenii
MGP_SPRETEiJ_G0032079	Wrn	88	59.669	ENSOPRG00000001480	WRN	88	59.669	Ochotona_princeps
MGP_SPRETEiJ_G0032079	Wrn	100	71.693	ENSODEG00000004076	WRN	100	71.764	Octodon_degus
MGP_SPRETEiJ_G0032079	Wrn	90	59.828	ENSOANG00000005952	-	95	59.828	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0032079	Wrn	100	71.661	ENSOCUG00000012620	WRN	90	71.590	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0032079	Wrn	97	69.192	ENSOGAG00000009600	WRN	100	69.264	Otolemur_garnettii
MGP_SPRETEiJ_G0032079	Wrn	99	69.236	ENSOARG00000000163	WRN	99	69.165	Ovis_aries
MGP_SPRETEiJ_G0032079	Wrn	100	71.429	ENSPPAG00000036871	WRN	99	71.429	Pan_paniscus
MGP_SPRETEiJ_G0032079	Wrn	100	69.012	ENSPPRG00000010928	WRN	99	68.941	Panthera_pardus
MGP_SPRETEiJ_G0032079	Wrn	100	68.870	ENSPTIG00000020609	WRN	99	68.870	Panthera_tigris_altaica
MGP_SPRETEiJ_G0032079	Wrn	100	71.196	ENSPTRG00000020145	WRN	99	71.196	Pan_troglodytes
MGP_SPRETEiJ_G0032079	Wrn	99	70.321	ENSPANG00000018594	WRN	99	70.601	Papio_anubis
MGP_SPRETEiJ_G0032079	Wrn	76	61.751	ENSPKIG00000025497	wrn	96	61.751	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0032079	Wrn	97	57.122	ENSPSIG00000013411	WRN	92	57.461	Pelodiscus_sinensis
MGP_SPRETEiJ_G0032079	Wrn	99	81.740	ENSPEMG00000020615	Wrn	99	82.800	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0032079	Wrn	96	56.461	ENSPCIG00000020146	WRN	98	57.122	Phascolarctos_cinereus
MGP_SPRETEiJ_G0032079	Wrn	100	70.363	ENSPPYG00000018494	WRN	99	70.711	Pongo_abelii
MGP_SPRETEiJ_G0032079	Wrn	90	69.914	ENSPCAG00000013763	WRN	88	69.914	Procavia_capensis
MGP_SPRETEiJ_G0032079	Wrn	78	59.706	ENSPCOG00000012938	WRN	96	59.675	Propithecus_coquereli
MGP_SPRETEiJ_G0032079	Wrn	93	68.293	ENSPVAG00000012909	WRN	95	68.293	Pteropus_vampyrus
MGP_SPRETEiJ_G0032079	Wrn	94	48.558	ENSPNAG00000021848	wrn	88	48.712	Pygocentrus_nattereri
MGP_SPRETEiJ_G0032079	Wrn	100	86.438	ENSRNOG00000015440	Wrn	100	86.438	Rattus_norvegicus
MGP_SPRETEiJ_G0032079	Wrn	100	70.798	ENSRBIG00000031825	WRN	99	71.567	Rhinopithecus_bieti
MGP_SPRETEiJ_G0032079	Wrn	100	70.391	ENSRROG00000045381	WRN	99	70.321	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0032079	Wrn	100	70.650	ENSSBOG00000027238	WRN	99	70.650	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0032079	Wrn	99	56.627	ENSSHAG00000005577	WRN	99	57.255	Sarcophilus_harrisii
MGP_SPRETEiJ_G0032079	Wrn	95	49.852	ENSSFOG00015006123	wrn	95	49.963	Scleropages_formosus
MGP_SPRETEiJ_G0032079	Wrn	73	66.234	ENSSARG00000006157	WRN	87	66.234	Sorex_araneus
MGP_SPRETEiJ_G0032079	Wrn	97	72.447	ENSSSCG00000015840	WRN	99	72.373	Sus_scrofa
MGP_SPRETEiJ_G0032079	Wrn	72	55.712	ENSTGUG00000001765	WRN	100	57.048	Taeniopygia_guttata
MGP_SPRETEiJ_G0032079	Wrn	78	56.286	ENSTBEG00000012702	-	78	56.517	Tupaia_belangeri
MGP_SPRETEiJ_G0032079	Wrn	98	65.654	ENSTTRG00000012302	WRN	99	65.529	Tursiops_truncatus
MGP_SPRETEiJ_G0032079	Wrn	99	67.377	ENSUAMG00000021324	WRN	99	67.448	Ursus_americanus
MGP_SPRETEiJ_G0032079	Wrn	85	67.583	ENSUMAG00000007159	WRN	97	67.583	Ursus_maritimus
MGP_SPRETEiJ_G0032079	Wrn	100	65.339	ENSVPAG00000011004	WRN	99	65.339	Vicugna_pacos
MGP_SPRETEiJ_G0032079	Wrn	100	67.034	ENSVVUG00000019867	WRN	99	67.034	Vulpes_vulpes
MGP_SPRETEiJ_G0032079	Wrn	98	53.123	ENSXETG00000018302	wrn	99	55.153	Xenopus_tropicalis