EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0032213 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 33659 bases
Position: chr8:65217279-65250937
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0088081	Gar1	PF04410.14	2.4e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0088081	-	2531	-	MGP_SPRETEiJ_P0088081	460 (aa)	-	-
MGP_SPRETEiJ_T0088082	-	852	-	MGP_SPRETEiJ_P0088082	224 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0032213's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0032213's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0032213	-	94	68.834	ENSG00000145414	NAF1	95	92.500	Homo_sapiens
MGP_SPRETEiJ_G0032213	-	94	69.144	ENSAMEG00000014688	NAF1	61	82.192	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0032213	-	54	39.921	ENSAOCG00000003518	-	66	42.069	Amphiprion_ocellaris
MGP_SPRETEiJ_G0032213	-	57	58.993	ENSAPLG00000003210	NAF1	83	57.877	Anas_platyrhynchos
MGP_SPRETEiJ_G0032213	-	94	69.778	ENSANAG00000025253	NAF1	93	92.500	Aotus_nancymaae
MGP_SPRETEiJ_G0032213	-	52	82.845	ENSBTAG00000034700	NAF1	66	82.845	Bos_taurus
MGP_SPRETEiJ_G0032213	-	94	65.310	ENSCJAG00000012406	NAF1	95	90.000	Callithrix_jacchus
MGP_SPRETEiJ_G0032213	-	62	81.315	ENSCAFG00020005334	NAF1	63	81.164	Canis_lupus_dingo
MGP_SPRETEiJ_G0032213	-	51	84.034	ENSCHIG00000018430	NAF1	65	82.500	Capra_hircus
MGP_SPRETEiJ_G0032213	-	62	83.505	ENSTSYG00000005946	NAF1	91	92.308	Carlito_syrichta
MGP_SPRETEiJ_G0032213	-	62	81.034	ENSCAPG00000017838	NAF1	77	81.100	Cavia_aperea
MGP_SPRETEiJ_G0032213	-	94	67.195	ENSCPOG00000010331	NAF1	59	81.787	Cavia_porcellus
MGP_SPRETEiJ_G0032213	-	94	68.680	ENSCCAG00000030023	NAF1	95	92.500	Cebus_capucinus
MGP_SPRETEiJ_G0032213	-	94	67.562	ENSCATG00000022663	NAF1	95	92.500	Cercocebus_atys
MGP_SPRETEiJ_G0032213	-	94	66.362	ENSCLAG00000017209	NAF1	64	81.443	Chinchilla_lanigera
MGP_SPRETEiJ_G0032213	-	94	68.233	ENSCSAG00000003199	NAF1	58	84.483	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0032213	-	55	82.422	ENSCHOG00000011393	NAF1	52	82.490	Choloepus_hoffmanni
MGP_SPRETEiJ_G0032213	-	58	58.392	ENSCPBG00000003379	NAF1	69	56.954	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0032213	-	94	67.640	ENSCANG00000039151	NAF1	95	92.500	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0032213	-	94	74.376	ENSCGRG00001018484	Naf1	88	74.208	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0032213	-	62	87.629	ENSCGRG00000001742	Naf1	84	87.671	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0032213	-	60	46.237	ENSDARG00000057929	naf1	56	45.675	Danio_rerio
MGP_SPRETEiJ_G0032213	-	94	68.182	ENSDNOG00000031106	NAF1	59	82.474	Dasypus_novemcinctus
MGP_SPRETEiJ_G0032213	-	62	85.172	ENSDORG00000011327	Naf1	64	85.223	Dipodomys_ordii
MGP_SPRETEiJ_G0032213	-	61	47.719	ENSETEG00000002872	-	60	48.110	Echinops_telfairi
MGP_SPRETEiJ_G0032213	-	94	68.304	ENSEASG00005022201	NAF1	59	82.069	Equus_asinus_asinus
MGP_SPRETEiJ_G0032213	-	94	67.929	ENSECAG00000016738	NAF1	59	82.069	Equus_caballus
MGP_SPRETEiJ_G0032213	-	94	67.713	ENSFCAG00000031652	NAF1	61	82.545	Felis_catus
MGP_SPRETEiJ_G0032213	-	59	57.840	ENSFALG00000011110	NAF1	64	57.239	Ficedula_albicollis
MGP_SPRETEiJ_G0032213	-	94	67.640	ENSFDAG00000007497	NAF1	87	63.657	Fukomys_damarensis
MGP_SPRETEiJ_G0032213	-	60	56.944	ENSGALG00000009496	NAF1	68	57.288	Gallus_gallus
MGP_SPRETEiJ_G0032213	-	94	69.283	ENSGGOG00000000894	NAF1	95	92.500	Gorilla_gorilla
MGP_SPRETEiJ_G0032213	-	94	70.000	ENSHGLG00000014899	NAF1	60	83.904	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0032213	-	94	70.000	ENSHGLG00100007507	NAF1	60	83.904	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0032213	-	94	67.634	ENSSTOG00000023858	NAF1	60	85.223	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0032213	-	62	80.412	ENSJJAG00000012147	-	82	80.479	Jaculus_jaculus
MGP_SPRETEiJ_G0032213	-	58	51.337	ENSKMAG00000005434	-	56	51.295	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0032213	-	56	45.312	ENSLBEG00000020414	-	55	45.455	Labrus_bergylta
MGP_SPRETEiJ_G0032213	-	76	62.393	ENSLAFG00000009193	-	64	86.500	Loxodonta_africana
MGP_SPRETEiJ_G0032213	-	94	67.785	ENSMFAG00000040952	NAF1	95	92.500	Macaca_fascicularis
MGP_SPRETEiJ_G0032213	-	94	67.562	ENSMMUG00000001717	NAF1	95	92.500	Macaca_mulatta
MGP_SPRETEiJ_G0032213	-	94	67.785	ENSMNEG00000032677	NAF1	95	92.500	Macaca_nemestrina
MGP_SPRETEiJ_G0032213	-	94	67.627	ENSMLEG00000035330	NAF1	95	92.500	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0032213	-	60	55.593	ENSMGAG00000002133	NAF1	91	55.960	Meleagris_gallopavo
MGP_SPRETEiJ_G0032213	-	62	88.316	ENSMAUG00000013072	Naf1	68	88.356	Mesocricetus_auratus
MGP_SPRETEiJ_G0032213	-	94	67.857	ENSMICG00000038661	NAF1	91	92.308	Microcebus_murinus
MGP_SPRETEiJ_G0032213	-	75	84.225	ENSMOCG00000010360	Naf1	88	73.756	Microtus_ochrogaster
MGP_SPRETEiJ_G0032213	-	94	80.594	MGP_CAROLIEiJ_G0031097	Naf1	64	93.352	Mus_caroli
MGP_SPRETEiJ_G0032213	-	94	86.907	ENSMUSG00000014907	Naf1	76	97.230	Mus_musculus
MGP_SPRETEiJ_G0032213	-	94	83.257	MGP_PahariEiJ_G0021563	-	88	82.005	Mus_pahari
MGP_SPRETEiJ_G0032213	-	94	67.568	ENSMPUG00000001861	NAF1	60	81.293	Mustela_putorius_furo
MGP_SPRETEiJ_G0032213	-	62	77.931	ENSMLUG00000004627	NAF1	70	74.780	Myotis_lucifugus
MGP_SPRETEiJ_G0032213	-	94	70.787	ENSNGAG00000023833	Naf1	88	68.709	Nannospalax_galili
MGP_SPRETEiJ_G0032213	-	84	68.182	ENSNLEG00000006459	-	95	92.500	Nomascus_leucogenys
MGP_SPRETEiJ_G0032213	-	94	66.892	ENSODEG00000006528	NAF1	66	82.192	Octodon_degus
MGP_SPRETEiJ_G0032213	-	55	69.732	ENSOANG00000014157	-	77	64.901	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0032213	-	62	83.217	ENSOCUG00000000485	NAF1	87	66.516	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0032213	-	57	42.966	ENSOMEG00000021322	-	52	42.857	Oryzias_melastigma
MGP_SPRETEiJ_G0032213	-	62	80.345	ENSOARG00000013716	NAF1	64	80.412	Ovis_aries
MGP_SPRETEiJ_G0032213	-	94	69.058	ENSPPAG00000034674	NAF1	95	92.500	Pan_paniscus
MGP_SPRETEiJ_G0032213	-	94	67.713	ENSPPRG00000003688	NAF1	60	82.818	Panthera_pardus
MGP_SPRETEiJ_G0032213	-	94	67.713	ENSPTIG00000017246	NAF1	60	82.818	Panthera_tigris_altaica
MGP_SPRETEiJ_G0032213	-	94	69.058	ENSPTRG00000016560	NAF1	95	92.500	Pan_troglodytes
MGP_SPRETEiJ_G0032213	-	94	67.265	ENSPANG00000015574	NAF1	95	92.500	Papio_anubis
MGP_SPRETEiJ_G0032213	-	58	58.188	ENSPSIG00000006545	NAF1	76	58.885	Pelodiscus_sinensis
MGP_SPRETEiJ_G0032213	-	75	79.545	ENSPEMG00000014321	Naf1	76	86.301	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0032213	-	50	84.120	ENSPPYG00000029771	-	80	84.120	Pongo_abelii
MGP_SPRETEiJ_G0032213	-	94	65.688	ENSPVAG00000016222	NAF1	59	80.345	Pteropus_vampyrus
MGP_SPRETEiJ_G0032213	-	94	78.507	ENSRNOG00000026403	Naf1	98	77.523	Rattus_norvegicus
MGP_SPRETEiJ_G0032213	-	94	68.397	ENSRBIG00000030027	NAF1	95	92.500	Rhinopithecus_bieti
MGP_SPRETEiJ_G0032213	-	94	67.946	ENSRROG00000040912	NAF1	95	92.500	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0032213	-	94	69.933	ENSSBOG00000002085	NAF1	95	92.500	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0032213	-	53	61.024	ENSSPUG00000004087	NAF1	68	71.429	Sphenodon_punctatus
MGP_SPRETEiJ_G0032213	-	62	80.345	ENSSSCG00000008887	NAF1	63	80.412	Sus_scrofa
MGP_SPRETEiJ_G0032213	-	62	79.310	ENSTTRG00000010106	NAF1	65	79.381	Tursiops_truncatus
MGP_SPRETEiJ_G0032213	-	94	67.713	ENSUAMG00000017043	NAF1	60	82.534	Ursus_americanus
MGP_SPRETEiJ_G0032213	-	94	67.713	ENSUMAG00000019748	NAF1	60	82.192	Ursus_maritimus
MGP_SPRETEiJ_G0032213	-	62	81.315	ENSVVUG00000022303	NAF1	79	81.164	Vulpes_vulpes