EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_SPRETEiJ_G0032480 (Gene tree)
Gene ID
-
Gene Symbol
Sall1
Alias
Msal-3
Full Name
spalt like transcription factor 1
Gene Type
protein_coding
Species
Mus_spretus
Status
putative
Strand
Minus strand
Length
19303 bases
Position
chr8:87972058-87991360
Accession
1889585
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_SPRETEiJ_P0088985zf-C2H2PF00096.268.1e-3416
MGP_SPRETEiJ_P0088985zf-C2H2PF00096.268.1e-3426
MGP_SPRETEiJ_P0088985zf-C2H2PF00096.268.1e-3436
MGP_SPRETEiJ_P0088985zf-C2H2PF00096.268.1e-3446
MGP_SPRETEiJ_P0088985zf-C2H2PF00096.268.1e-3456
MGP_SPRETEiJ_P0088985zf-C2H2PF00096.268.1e-3466
MGP_SPRETEiJ_P0088985zf-metPF12874.71.6e-2415
MGP_SPRETEiJ_P0088985zf-metPF12874.71.6e-2425
MGP_SPRETEiJ_P0088985zf-metPF12874.71.6e-2435
MGP_SPRETEiJ_P0088985zf-metPF12874.71.6e-2445
MGP_SPRETEiJ_P0088985zf-metPF12874.71.6e-2455
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_SPRETEiJ_T0088985-5263-MGP_SPRETEiJ_P00889851323 (aa)--
Gene Model
Click here to download MGP_SPRETEiJ_G0032480's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0032480's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_SPRETEiJ_G0032480Sall19965.306MGP_SPRETEiJ_G0023357Sall39965.306
MGP_SPRETEiJ_G0032480Sall19564.706MGP_SPRETEiJ_G0025643Sall410064.706
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_SPRETEiJ_G0032480Sall110090.264ENSG00000103449SALL110090.391Homo_sapiens
MGP_SPRETEiJ_G0032480Sall110067.457ENSAPOG00000022764sall1a9967.037Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0032480Sall110088.746ENSAMEG00000006817SALL110088.973Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0032480Sall110066.420ENSACIG00000004231sall1a9965.999Amphilophus_citrinellus
MGP_SPRETEiJ_G0032480Sall110067.457ENSAOCG00000002800sall1a9967.037Amphiprion_ocellaris
MGP_SPRETEiJ_G0032480Sall110067.457ENSAPEG00000010179sall1a9967.037Amphiprion_percula
MGP_SPRETEiJ_G0032480Sall110066.790ENSATEG00000003006sall1a10066.480Anabas_testudineus
MGP_SPRETEiJ_G0032480Sall110082.540ENSAPLG00000003356SALL19983.220Anas_platyrhynchos
MGP_SPRETEiJ_G0032480Sall19979.528ENSACAG00000014399SALL19679.436Anolis_carolinensis
MGP_SPRETEiJ_G0032480Sall110090.642ENSANAG00000027238SALL110090.642Aotus_nancymaae
MGP_SPRETEiJ_G0032480Sall110066.444ENSACLG00000017148sall1a9965.924Astatotilapia_calliptera
MGP_SPRETEiJ_G0032480Sall110067.530ENSAMXG00000018599sall1a9967.164Astyanax_mexicanus
MGP_SPRETEiJ_G0032480Sall19950.774ENSAMXG00000017702sall1b9950.920Astyanax_mexicanus
MGP_SPRETEiJ_G0032480Sall110088.679ENSBTAG00000008544SALL110088.914Bos_taurus
MGP_SPRETEiJ_G0032480Sall110090.491ENSCJAG00000001740SALL110090.491Callithrix_jacchus
MGP_SPRETEiJ_G0032480Sall110089.668ENSCAFG00000009755SALL110089.894Canis_familiaris
MGP_SPRETEiJ_G0032480Sall110089.668ENSCAFG00020002842SALL110089.894Canis_lupus_dingo
MGP_SPRETEiJ_G0032480Sall110088.235ENSCHIG00000026074SALL110088.395Capra_hircus
MGP_SPRETEiJ_G0032480Sall110090.792ENSTSYG00000029464SALL110090.634Carlito_syrichta
MGP_SPRETEiJ_G0032480Sall19891.063ENSCPOG00000006564SALL110090.832Cavia_porcellus
MGP_SPRETEiJ_G0032480Sall110087.623ENSCCAG00000001639SALL110087.547Cebus_capucinus
MGP_SPRETEiJ_G0032480Sall110090.415ENSCATG00000004982SALL110090.566Cercocebus_atys
MGP_SPRETEiJ_G0032480Sall110090.937ENSCLAG00000006380SALL110090.937Chinchilla_lanigera
MGP_SPRETEiJ_G0032480Sall110089.509ENSCSAG00000005319SALL110089.509Chlorocebus_sabaeus
MGP_SPRETEiJ_G0032480Sall16494.466ENSCHOG00000000800-6994.466Choloepus_hoffmanni
MGP_SPRETEiJ_G0032480Sall110083.082ENSCPBG00000015924SALL19984.013Chrysemys_picta_bellii
MGP_SPRETEiJ_G0032480Sall110090.264ENSCANG00000036664SALL110090.635Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0032480Sall110093.878ENSCGRG00001023314-10093.500Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0032480Sall19893.755ENSCGRG00000009496Sall110093.369Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0032480Sall110065.137ENSCSEG00000009349sall1a10065.729Cynoglossus_semilaevis
MGP_SPRETEiJ_G0032480Sall19065.860ENSCVAG00000020513sall1a9965.138Cyprinodon_variegatus
MGP_SPRETEiJ_G0032480Sall19946.177ENSDARG00000075891sall1b9946.285Danio_rerio
MGP_SPRETEiJ_G0032480Sall110067.409ENSDARG00000074319sall1a10067.160Danio_rerio
MGP_SPRETEiJ_G0032480Sall110088.009ENSDNOG00000016413SALL110088.311Dasypus_novemcinctus
MGP_SPRETEiJ_G0032480Sall19887.827ENSETEG00000015150SALL110087.982Echinops_telfairi
MGP_SPRETEiJ_G0032480Sall19065.385ENSEBUG00000011732SALL19765.385Eptatretus_burgeri
MGP_SPRETEiJ_G0032480Sall16942.571ENSEBUG00000008798SALL16843.860Eptatretus_burgeri
MGP_SPRETEiJ_G0032480Sall110090.030ENSEASG00005014602SALL110090.030Equus_asinus_asinus
MGP_SPRETEiJ_G0032480Sall19187.667ENSECAG00000011334SALL19987.667Equus_caballus
MGP_SPRETEiJ_G0032480Sall19888.556ENSEEUG00000002014SALL110088.479Erinaceus_europaeus
MGP_SPRETEiJ_G0032480Sall19951.075ENSELUG00000017774-9950.258Esox_lucius
MGP_SPRETEiJ_G0032480Sall110064.564ENSELUG00000006159sall1a10063.977Esox_lucius
MGP_SPRETEiJ_G0032480Sall110088.395ENSFCAG00000024654SALL110088.780Felis_catus
MGP_SPRETEiJ_G0032480Sall110082.024ENSFALG00000000074SALL19982.389Ficedula_albicollis
MGP_SPRETEiJ_G0032480Sall17563.462ENSFHEG00000008424-9961.538Fundulus_heteroclitus
MGP_SPRETEiJ_G0032480Sall110066.443ENSFHEG00000012579sall1a9965.850Fundulus_heteroclitus
MGP_SPRETEiJ_G0032480Sall19741.770ENSGMOG00000013383-9942.036Gadus_morhua
MGP_SPRETEiJ_G0032480Sall110065.048ENSGMOG00000006103sall1a9965.130Gadus_morhua
MGP_SPRETEiJ_G0032480Sall110082.477ENSGALG00000039238SALL19982.842Gallus_gallus
MGP_SPRETEiJ_G0032480Sall110066.617ENSGAFG00000009964sall1a9966.494Gambusia_affinis
MGP_SPRETEiJ_G0032480Sall110065.850ENSGACG00000016702sall1a10065.604Gasterosteus_aculeatus
MGP_SPRETEiJ_G0032480Sall110082.704ENSGAGG00000013979SALL19983.605Gopherus_agassizii
MGP_SPRETEiJ_G0032480Sall110090.415ENSGGOG00000000663SALL110090.415Gorilla_gorilla
MGP_SPRETEiJ_G0032480Sall110066.444ENSHBUG00000022005sall1a9965.924Haplochromis_burtoni
MGP_SPRETEiJ_G0032480Sall110091.088ENSHGLG00000004288-10091.088Heterocephalus_glaber_female
MGP_SPRETEiJ_G0032480Sall110091.088ENSHGLG00100017496SALL110091.088Heterocephalus_glaber_male
MGP_SPRETEiJ_G0032480Sall110065.188ENSHCOG00000000974sall1a9965.574Hippocampus_comes
MGP_SPRETEiJ_G0032480Sall19967.836ENSIPUG00000016265SALL19966.966Ictalurus_punctatus
MGP_SPRETEiJ_G0032480Sall19949.478ENSIPUG00000022928sall1b9949.180Ictalurus_punctatus
MGP_SPRETEiJ_G0032480Sall110090.950ENSSTOG00000020885SALL110090.347Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0032480Sall110066.420ENSKMAG00000016681sall1a9965.975Kryptolebias_marmoratus
MGP_SPRETEiJ_G0032480Sall19765.902ENSLBEG00000012207sall1a9565.596Labrus_bergylta
MGP_SPRETEiJ_G0032480Sall19739.275ENSLACG00000014018-9339.936Latimeria_chalumnae
MGP_SPRETEiJ_G0032480Sall110076.284ENSLACG00000003556SALL19976.568Latimeria_chalumnae
MGP_SPRETEiJ_G0032480Sall110071.652ENSLOCG00000007283sall1b9971.621Lepisosteus_oculatus
MGP_SPRETEiJ_G0032480Sall19888.376ENSLAFG00000015251SALL110087.914Loxodonta_africana
MGP_SPRETEiJ_G0032480Sall110090.566ENSMFAG00000003298SALL110090.566Macaca_fascicularis
MGP_SPRETEiJ_G0032480Sall19390.717ENSMMUG00000017200SALL110090.717Macaca_mulatta
MGP_SPRETEiJ_G0032480Sall19390.635ENSMNEG00000034770SALL110090.635Macaca_nemestrina
MGP_SPRETEiJ_G0032480Sall110090.340ENSMLEG00000036406SALL110090.635Mandrillus_leucophaeus
MGP_SPRETEiJ_G0032480Sall110067.208ENSMAMG00000004164sall1a10066.863Mastacembelus_armatus
MGP_SPRETEiJ_G0032480Sall110066.444ENSMZEG00005006479sall1a9965.924Maylandia_zebra
MGP_SPRETEiJ_G0032480Sall19882.602ENSMGAG00000004704SALL19982.974Meleagris_gallopavo
MGP_SPRETEiJ_G0032480Sall110092.447ENSMAUG00000019093Sall110092.296Mesocricetus_auratus
MGP_SPRETEiJ_G0032480Sall110089.275ENSMICG00000036486SALL110089.275Microcebus_murinus
MGP_SPRETEiJ_G0032480Sall110066.048ENSMMOG00000016400sall1a10065.875Mola_mola
MGP_SPRETEiJ_G0032480Sall110085.876ENSMODG00000013114SALL110085.574Monodelphis_domestica
MGP_SPRETEiJ_G0032480Sall110066.839ENSMALG00000013400sall1a10066.667Monopterus_albus
MGP_SPRETEiJ_G0032480Sall110099.019MGP_CAROLIEiJ_G0031362Sall110099.019Mus_caroli
MGP_SPRETEiJ_G0032480Sall110099.698ENSMUSG00000031665Sall110099.698Mus_musculus
MGP_SPRETEiJ_G0032480Sall110097.583MGP_PahariEiJ_G0022961Sall110097.583Mus_pahari
MGP_SPRETEiJ_G0032480Sall19887.404ENSMPUG00000003265SALL19787.072Mustela_putorius_furo
MGP_SPRETEiJ_G0032480Sall19882.811ENSMLUG00000015541SALL110082.811Myotis_lucifugus
MGP_SPRETEiJ_G0032480Sall110066.692ENSNBRG00000009307sall1a9966.170Neolamprologus_brichardi
MGP_SPRETEiJ_G0032480Sall19497.222ENSNLEG00000001008SALL110097.222Nomascus_leucogenys
MGP_SPRETEiJ_G0032480Sall110085.650ENSMEUG00000012206SALL110085.045Notamacropus_eugenii
MGP_SPRETEiJ_G0032480Sall18893.421ENSOPRG00000005645SALL17493.285Ochotona_princeps
MGP_SPRETEiJ_G0032480Sall110090.937ENSODEG00000003685SALL110090.937Octodon_degus
MGP_SPRETEiJ_G0032480Sall110066.916ENSONIG00000002831sall1a9966.393Oreochromis_niloticus
MGP_SPRETEiJ_G0032480Sall18988.302ENSOANG00000013399SALL19985.776Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0032480Sall110066.395ENSORLG00000013827sall1a9868.007Oryzias_latipes
MGP_SPRETEiJ_G0032480Sall110066.321ENSORLG00020020570sall1a9966.295Oryzias_latipes_hni
MGP_SPRETEiJ_G0032480Sall110066.543ENSORLG00015018830sall1a10066.346Oryzias_latipes_hsok
MGP_SPRETEiJ_G0032480Sall110066.469ENSOMEG00000016043sall1a9966.420Oryzias_melastigma
MGP_SPRETEiJ_G0032480Sall110089.275ENSOGAG00000027316SALL110089.426Otolemur_garnettii
MGP_SPRETEiJ_G0032480Sall110082.971ENSOARG00000017583SALL110083.133Ovis_aries
MGP_SPRETEiJ_G0032480Sall19867.923ENSPPAG00000035136-9968.433Pan_paniscus
MGP_SPRETEiJ_G0032480Sall19989.405ENSPPAG00000035657SALL110090.069Pan_paniscus
MGP_SPRETEiJ_G0032480Sall110088.470ENSPPRG00000023283SALL110088.862Panthera_pardus
MGP_SPRETEiJ_G0032480Sall18495.238ENSPTIG00000013539-9695.238Panthera_tigris_altaica
MGP_SPRETEiJ_G0032480Sall110090.053ENSPTRG00000008108SALL110089.790Pan_troglodytes
MGP_SPRETEiJ_G0032480Sall19668.371ENSPTRG00000045256-9868.941Pan_troglodytes
MGP_SPRETEiJ_G0032480Sall110090.415ENSPANG00000024176SALL110090.566Papio_anubis
MGP_SPRETEiJ_G0032480Sall110065.347ENSPKIG00000022251sall1a9964.873Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0032480Sall110065.169ENSPKIG00000005383-9965.064Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0032480Sall110082.704ENSPSIG00000008582SALL19982.993Pelodiscus_sinensis
MGP_SPRETEiJ_G0032480Sall110064.542ENSPMGG00000021788sall1a10064.758Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0032480Sall19951.209ENSPMAG00000008148sall1b9951.314Petromyzon_marinus
MGP_SPRETEiJ_G0032480Sall110085.650ENSPCIG00000017840SALL110085.196Phascolarctos_cinereus
MGP_SPRETEiJ_G0032480Sall19866.440ENSPFOG00000015799sall1a9666.264Poecilia_formosa
MGP_SPRETEiJ_G0032480Sall110066.568ENSPLAG00000022539sall1a9966.395Poecilia_latipinna
MGP_SPRETEiJ_G0032480Sall110066.716ENSPMEG00000020894sall1a9966.420Poecilia_mexicana
MGP_SPRETEiJ_G0032480Sall110066.568ENSPREG00000006802sall1a9966.271Poecilia_reticulata
MGP_SPRETEiJ_G0032480Sall19089.661ENSPPYG00000007345SALL19689.661Pongo_abelii
MGP_SPRETEiJ_G0032480Sall18493.827ENSPCAG00000008162SALL19393.827Procavia_capensis
MGP_SPRETEiJ_G0032480Sall110089.132ENSPCOG00000028192SALL110089.358Propithecus_coquereli
MGP_SPRETEiJ_G0032480Sall16789.486ENSPVAG00000015374SALL110090.654Pteropus_vampyrus
MGP_SPRETEiJ_G0032480Sall110066.518ENSPNYG00000010865sall1a9965.999Pundamilia_nyererei
MGP_SPRETEiJ_G0032480Sall110065.827ENSPNAG00000023644sall1a9965.445Pygocentrus_nattereri
MGP_SPRETEiJ_G0032480Sall19953.299ENSPNAG00000007442sall1b9952.859Pygocentrus_nattereri
MGP_SPRETEiJ_G0032480Sall19863.462ENSPNAG00000028248-9965.306Pygocentrus_nattereri
MGP_SPRETEiJ_G0032480Sall110095.245ENSRNOG00000013907Sall110095.245Rattus_norvegicus
MGP_SPRETEiJ_G0032480Sall19390.798ENSRBIG00000015707SALL110090.798Rhinopithecus_bieti
MGP_SPRETEiJ_G0032480Sall19989.863ENSRROG00000035777SALL110090.879Rhinopithecus_roxellana
MGP_SPRETEiJ_G0032480Sall110090.717ENSSBOG00000032186SALL110090.717Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0032480Sall110084.883ENSSHAG00000009477SALL110084.819Sarcophilus_harrisii
MGP_SPRETEiJ_G0032480Sall19965.479ENSSFOG00015020020sall1a9965.405Scleropages_formosus
MGP_SPRETEiJ_G0032480Sall19865.959ENSSFOG00015001590sall1a9966.260Scleropages_formosus
MGP_SPRETEiJ_G0032480Sall110066.617ENSSMAG00000009160sall1a10066.493Scophthalmus_maximus
MGP_SPRETEiJ_G0032480Sall110067.161ENSSDUG00000006507sall1a10066.667Seriola_dumerili
MGP_SPRETEiJ_G0032480Sall17659.184ENSSDUG00000000748sall1b9959.184Seriola_dumerili
MGP_SPRETEiJ_G0032480Sall110067.235ENSSLDG00000017721sall1a10066.741Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0032480Sall19888.940ENSSARG00000000661SALL110089.102Sorex_araneus
MGP_SPRETEiJ_G0032480Sall110082.704ENSSPUG00000000156SALL19982.993Sphenodon_punctatus
MGP_SPRETEiJ_G0032480Sall110067.234ENSSPAG00000021615sall1a9966.913Stegastes_partitus
MGP_SPRETEiJ_G0032480Sall110088.621ENSSSCG00000002836SALL110088.470Sus_scrofa
MGP_SPRETEiJ_G0032480Sall110082.326ENSTGUG00000007514SALL19982.691Taeniopygia_guttata
MGP_SPRETEiJ_G0032480Sall19164.758ENSTRUG00000008950sall1a10064.968Takifugu_rubripes
MGP_SPRETEiJ_G0032480Sall19264.274ENSTNIG00000004257sall1a10064.222Tetraodon_nigroviridis
MGP_SPRETEiJ_G0032480Sall173100.000ENSTBEG00000002119-55100.000Tupaia_belangeri
MGP_SPRETEiJ_G0032480Sall19088.465ENSUAMG00000023379-9288.634Ursus_americanus
MGP_SPRETEiJ_G0032480Sall19088.588ENSVVUG00000019383-9988.757Vulpes_vulpes
MGP_SPRETEiJ_G0032480Sall17661.538ENSXETG00000017176sall26061.538Xenopus_tropicalis
MGP_SPRETEiJ_G0032480Sall110073.324ENSXETG00000018417sall19973.378Xenopus_tropicalis
MGP_SPRETEiJ_G0032480Sall110066.642ENSXMAG00000016273sall1a9966.345Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us