EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0032628 (Gene tree)
Gene ID: -
Gene Symbol: Ddx28
Alias: 2410004K13Rik|Mddx28
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 28
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 2147 bases
Position: chr8:105686047-105688193
Accession: 1919236
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0089371	DEAD	PF00270.29	3e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0089371	-	2147	-	MGP_SPRETEiJ_P0089371	540 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0032628's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0032628's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0032628	Ddx28	72	32.911	MGP_SPRETEiJ_G0030034	Ddx47	70	49.398
MGP_SPRETEiJ_G0032628	Ddx28	66	30.833	MGP_SPRETEiJ_G0020915	Ddx17	51	30.833
MGP_SPRETEiJ_G0032628	Ddx28	70	30.423	MGP_SPRETEiJ_G0033607	Ddx43	54	30.159
MGP_SPRETEiJ_G0032628	Ddx28	68	31.926	MGP_SPRETEiJ_G0032257	Ddx49	71	31.926
MGP_SPRETEiJ_G0032628	Ddx28	69	30.280	MGP_SPRETEiJ_G0028753	Ddx55	60	30.886
MGP_SPRETEiJ_G0032628	Ddx28	67	32.884	MGP_SPRETEiJ_G0015463	Ddx59	54	32.884

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0032628	Ddx28	99	80.669	ENSG00000182810	DDX28	99	80.669	Homo_sapiens
MGP_SPRETEiJ_G0032628	Ddx28	94	48.155	ENSAPOG00000000991	ddx28	89	48.155	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0032628	Ddx28	99	79.406	ENSAMEG00000019426	DDX28	97	80.000	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0032628	Ddx28	93	48.155	ENSACIG00000021615	ddx28	90	48.155	Amphilophus_citrinellus
MGP_SPRETEiJ_G0032628	Ddx28	94	48.356	ENSAOCG00000004610	ddx28	89	48.356	Amphiprion_ocellaris
MGP_SPRETEiJ_G0032628	Ddx28	94	48.162	ENSAPEG00000002143	ddx28	89	48.162	Amphiprion_percula
MGP_SPRETEiJ_G0032628	Ddx28	94	49.222	ENSATEG00000018691	ddx28	90	49.222	Anabas_testudineus
MGP_SPRETEiJ_G0032628	Ddx28	94	54.913	ENSACAG00000009755	DDX28	94	54.913	Anolis_carolinensis
MGP_SPRETEiJ_G0032628	Ddx28	93	47.082	ENSACLG00000012984	ddx28	89	47.082	Astatotilapia_calliptera
MGP_SPRETEiJ_G0032628	Ddx28	93	48.000	ENSAMXG00000005878	ddx28	91	48.000	Astyanax_mexicanus
MGP_SPRETEiJ_G0032628	Ddx28	96	81.766	ENSBTAG00000004290	DDX28	96	81.766	Bos_taurus
MGP_SPRETEiJ_G0032628	Ddx28	98	79.773	ENSCAFG00000020327	DDX28	99	79.773	Canis_familiaris
MGP_SPRETEiJ_G0032628	Ddx28	98	79.773	ENSCAFG00020019785	DDX28	99	79.773	Canis_lupus_dingo
MGP_SPRETEiJ_G0032628	Ddx28	96	81.696	ENSCHIG00000009658	DDX28	95	81.696	Capra_hircus
MGP_SPRETEiJ_G0032628	Ddx28	100	77.593	ENSCPOG00000013746	DDX28	97	78.503	Cavia_porcellus
MGP_SPRETEiJ_G0032628	Ddx28	99	78.293	ENSCSAG00000018472	DDX28	99	78.293	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0032628	Ddx28	87	61.571	ENSCPBG00000012105	DDX28	85	60.557	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0032628	Ddx28	67	40.053	ENSCSAVG00000006341	-	94	40.053	Ciona_savignyi
MGP_SPRETEiJ_G0032628	Ddx28	97	88.740	ENSCGRG00001024412	Ddx28	100	88.931	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0032628	Ddx28	94	47.876	ENSCSEG00000011651	ddx28	90	47.876	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0032628	Ddx28	94	50.487	ENSCVAG00000004044	ddx28	90	50.487	Cyprinodon_variegatus
MGP_SPRETEiJ_G0032628	Ddx28	93	49.511	ENSDARG00000060411	ddx28	90	49.511	Danio_rerio
MGP_SPRETEiJ_G0032628	Ddx28	68	80.707	ENSDNOG00000033593	DDX28	99	80.707	Dasypus_novemcinctus
MGP_SPRETEiJ_G0032628	Ddx28	99	79.963	ENSDORG00000028868	Ddx28	96	81.154	Dipodomys_ordii
MGP_SPRETEiJ_G0032628	Ddx28	88	33.539	FBgn0086130	Dbp21E2	87	33.402	Drosophila_melanogaster
MGP_SPRETEiJ_G0032628	Ddx28	100	77.593	ENSETEG00000001062	-	96	79.079	Echinops_telfairi
MGP_SPRETEiJ_G0032628	Ddx28	77	48.438	ENSEBUG00000004791	ddx28	80	48.705	Eptatretus_burgeri
MGP_SPRETEiJ_G0032628	Ddx28	100	82.593	ENSEASG00005020387	DDX28	100	82.593	Equus_asinus_asinus
MGP_SPRETEiJ_G0032628	Ddx28	100	82.222	ENSECAG00000006451	DDX28	100	82.222	Equus_caballus
MGP_SPRETEiJ_G0032628	Ddx28	78	71.360	ENSEEUG00000005017	DDX28	96	71.776	Erinaceus_europaeus
MGP_SPRETEiJ_G0032628	Ddx28	93	50.195	ENSELUG00000005302	ddx28	97	49.807	Esox_lucius
MGP_SPRETEiJ_G0032628	Ddx28	99	81.262	ENSFCAG00000012858	DDX28	96	82.308	Felis_catus
MGP_SPRETEiJ_G0032628	Ddx28	93	50.000	ENSFHEG00000012573	ddx28	90	50.000	Fundulus_heteroclitus
MGP_SPRETEiJ_G0032628	Ddx28	93	47.656	ENSGMOG00000017045	ddx28	95	47.656	Gadus_morhua
MGP_SPRETEiJ_G0032628	Ddx28	93	50.672	ENSGALG00000048700	DDX28	88	51.440	Gallus_gallus
MGP_SPRETEiJ_G0032628	Ddx28	93	49.216	ENSGAFG00000009249	ddx28	89	49.216	Gambusia_affinis
MGP_SPRETEiJ_G0032628	Ddx28	93	49.805	ENSGACG00000016367	ddx28	94	49.805	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0032628	Ddx28	79	59.722	ENSGAGG00000004565	DDX28	93	60.047	Gopherus_agassizii
MGP_SPRETEiJ_G0032628	Ddx28	99	81.041	ENSGGOG00000001220	DDX28	99	81.041	Gorilla_gorilla
MGP_SPRETEiJ_G0032628	Ddx28	93	49.419	ENSHBUG00000001016	ddx28	90	49.419	Haplochromis_burtoni
MGP_SPRETEiJ_G0032628	Ddx28	95	46.065	ENSHCOG00000017590	ddx28	93	46.065	Hippocampus_comes
MGP_SPRETEiJ_G0032628	Ddx28	93	48.833	ENSIPUG00000017350	Ddx28	89	48.833	Ictalurus_punctatus
MGP_SPRETEiJ_G0032628	Ddx28	100	80.370	ENSSTOG00000002064	DDX28	100	80.370	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0032628	Ddx28	100	79.520	ENSJJAG00000012460	-	100	79.520	Jaculus_jaculus
MGP_SPRETEiJ_G0032628	Ddx28	94	47.961	ENSKMAG00000018183	ddx28	90	47.961	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0032628	Ddx28	93	49.023	ENSLBEG00000006072	ddx28	90	49.023	Labrus_bergylta
MGP_SPRETEiJ_G0032628	Ddx28	95	54.776	ENSLACG00000005578	DDX28	88	54.776	Latimeria_chalumnae
MGP_SPRETEiJ_G0032628	Ddx28	95	52.107	ENSLOCG00000017604	ddx28	92	52.107	Lepisosteus_oculatus
MGP_SPRETEiJ_G0032628	Ddx28	99	81.076	ENSLAFG00000031239	DDX28	99	81.076	Loxodonta_africana
MGP_SPRETEiJ_G0032628	Ddx28	99	78.479	ENSMMUG00000010836	DDX28	99	78.479	Macaca_mulatta
MGP_SPRETEiJ_G0032628	Ddx28	94	49.328	ENSMAMG00000020220	ddx28	90	49.328	Mastacembelus_armatus
MGP_SPRETEiJ_G0032628	Ddx28	93	49.416	ENSMZEG00005009292	ddx28	90	49.416	Maylandia_zebra
MGP_SPRETEiJ_G0032628	Ddx28	96	68.008	ENSMICG00000012346	-	96	68.008	Microcebus_murinus
MGP_SPRETEiJ_G0032628	Ddx28	100	89.444	ENSMOCG00000009815	Ddx28	100	89.444	Microtus_ochrogaster
MGP_SPRETEiJ_G0032628	Ddx28	95	48.748	ENSMMOG00000000270	ddx28	92	48.748	Mola_mola
MGP_SPRETEiJ_G0032628	Ddx28	96	69.632	ENSMODG00000005303	DDX28	94	71.098	Monodelphis_domestica
MGP_SPRETEiJ_G0032628	Ddx28	94	48.555	ENSMALG00000008864	ddx28	90	48.555	Monopterus_albus
MGP_SPRETEiJ_G0032628	Ddx28	100	97.963	MGP_CAROLIEiJ_G0031510	Ddx28	100	97.963	Mus_caroli
MGP_SPRETEiJ_G0032628	Ddx28	100	99.259	ENSMUSG00000045538	Ddx28	100	99.259	Mus_musculus
MGP_SPRETEiJ_G0032628	Ddx28	100	97.222	MGP_PahariEiJ_G0023110	Ddx28	100	97.222	Mus_pahari
MGP_SPRETEiJ_G0032628	Ddx28	75	78.412	ENSMPUG00000006915	DDX28	100	78.412	Mustela_putorius_furo
MGP_SPRETEiJ_G0032628	Ddx28	98	78.302	ENSMLUG00000005899	DDX28	98	78.302	Myotis_lucifugus
MGP_SPRETEiJ_G0032628	Ddx28	96	84.808	ENSNGAG00000015762	Ddx28	96	85.192	Nannospalax_galili
MGP_SPRETEiJ_G0032628	Ddx28	93	49.219	ENSNBRG00000001337	ddx28	91	49.219	Neolamprologus_brichardi
MGP_SPRETEiJ_G0032628	Ddx28	93	49.416	ENSONIG00000020597	ddx28	90	49.416	Oreochromis_niloticus
MGP_SPRETEiJ_G0032628	Ddx28	52	63.121	ENSOANG00000003551	-	98	63.121	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0032628	Ddx28	100	79.444	ENSOCUG00000023074	DDX28	100	79.444	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0032628	Ddx28	93	48.431	ENSORLG00000011968	ddx28	90	48.431	Oryzias_latipes
MGP_SPRETEiJ_G0032628	Ddx28	93	48.235	ENSORLG00020001951	ddx28	91	48.235	Oryzias_latipes_hni
MGP_SPRETEiJ_G0032628	Ddx28	93	47.647	ENSORLG00015023030	ddx28	91	47.647	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0032628	Ddx28	94	47.767	ENSOMEG00000012445	ddx28	90	47.767	Oryzias_melastigma
MGP_SPRETEiJ_G0032628	Ddx28	97	79.317	ENSOGAG00000016895	DDX28	99	78.889	Otolemur_garnettii
MGP_SPRETEiJ_G0032628	Ddx28	82	77.928	ENSOARG00000003313	DDX28	99	77.928	Ovis_aries
MGP_SPRETEiJ_G0032628	Ddx28	99	77.509	ENSPPAG00000036971	DDX28	99	77.509	Pan_paniscus
MGP_SPRETEiJ_G0032628	Ddx28	99	82.560	ENSPPRG00000018322	DDX28	96	83.462	Panthera_pardus
MGP_SPRETEiJ_G0032628	Ddx28	99	79.221	ENSPTIG00000006444	DDX28	96	80.000	Panthera_tigris_altaica
MGP_SPRETEiJ_G0032628	Ddx28	99	80.855	ENSPTRG00000008258	DDX28	99	80.855	Pan_troglodytes
MGP_SPRETEiJ_G0032628	Ddx28	93	49.903	ENSPKIG00000021200	ddx28	93	49.903	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0032628	Ddx28	55	63.176	ENSPSIG00000001127	DDX28	97	63.176	Pelodiscus_sinensis
MGP_SPRETEiJ_G0032628	Ddx28	92	45.957	ENSPMGG00000007908	ddx28	88	45.957	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0032628	Ddx28	100	87.638	ENSPEMG00000003395	Ddx28	100	87.638	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0032628	Ddx28	52	51.049	ENSPMAG00000006983	DDX28	94	51.049	Petromyzon_marinus
MGP_SPRETEiJ_G0032628	Ddx28	93	49.412	ENSPFOG00000020838	DDX28	89	49.412	Poecilia_formosa
MGP_SPRETEiJ_G0032628	Ddx28	93	49.412	ENSPFOG00000020952	ddx28	88	49.412	Poecilia_formosa
MGP_SPRETEiJ_G0032628	Ddx28	93	49.412	ENSPLAG00000016292	ddx28	88	49.412	Poecilia_latipinna
MGP_SPRETEiJ_G0032628	Ddx28	93	49.412	ENSPMEG00000011311	ddx28	87	49.412	Poecilia_mexicana
MGP_SPRETEiJ_G0032628	Ddx28	94	48.833	ENSPREG00000002899	ddx28	88	49.216	Poecilia_reticulata
MGP_SPRETEiJ_G0032628	Ddx28	99	80.297	ENSPPYG00000007481	DDX28	100	80.297	Pongo_abelii
MGP_SPRETEiJ_G0032628	Ddx28	100	81.146	ENSPCOG00000024632	DDX28	96	81.801	Propithecus_coquereli
MGP_SPRETEiJ_G0032628	Ddx28	93	49.612	ENSPNYG00000018804	ddx28	90	49.612	Pundamilia_nyererei
MGP_SPRETEiJ_G0032628	Ddx28	93	49.421	ENSPNAG00000014597	ddx28	94	49.421	Pygocentrus_nattereri
MGP_SPRETEiJ_G0032628	Ddx28	99	91.651	ENSRNOG00000019817	Ddx28	99	91.651	Rattus_norvegicus
MGP_SPRETEiJ_G0032628	Ddx28	93	50.096	ENSSFOG00015010181	ddx28	92	50.096	Scleropages_formosus
MGP_SPRETEiJ_G0032628	Ddx28	93	48.242	ENSSMAG00000006831	ddx28	94	48.242	Scophthalmus_maximus
MGP_SPRETEiJ_G0032628	Ddx28	93	47.573	ENSSDUG00000003257	ddx28	89	47.573	Seriola_dumerili
MGP_SPRETEiJ_G0032628	Ddx28	93	47.573	ENSSLDG00000004513	ddx28	89	47.573	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0032628	Ddx28	99	78.439	ENSSARG00000014169	DDX28	99	78.439	Sorex_araneus
MGP_SPRETEiJ_G0032628	Ddx28	99	47.145	ENSSPAG00000000988	ddx28	90	48.932	Stegastes_partitus
MGP_SPRETEiJ_G0032628	Ddx28	100	81.296	ENSSSCG00000026038	DDX28	96	82.150	Sus_scrofa
MGP_SPRETEiJ_G0032628	Ddx28	96	47.893	ENSTRUG00000007815	ddx28	94	47.893	Takifugu_rubripes
MGP_SPRETEiJ_G0032628	Ddx28	94	48.915	ENSTNIG00000011352	ddx28	99	48.915	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0032628	Ddx28	87	86.301	ENSTBEG00000017695	DDX28	87	86.301	Tupaia_belangeri
MGP_SPRETEiJ_G0032628	Ddx28	99	81.447	ENSUAMG00000016116	DDX28	99	81.447	Ursus_americanus
MGP_SPRETEiJ_G0032628	Ddx28	81	81.507	ENSUMAG00000019200	DDX28	89	81.507	Ursus_maritimus
MGP_SPRETEiJ_G0032628	Ddx28	81	77.397	ENSVVUG00000012876	DDX28	87	77.397	Vulpes_vulpes
MGP_SPRETEiJ_G0032628	Ddx28	94	50.493	ENSXETG00000005435	ddx28	99	50.493	Xenopus_tropicalis
MGP_SPRETEiJ_G0032628	Ddx28	93	49.412	ENSXCOG00000012364	ddx28	88	49.412	Xiphophorus_couchianus
MGP_SPRETEiJ_G0032628	Ddx28	93	49.608	ENSXMAG00000019603	ddx28	91	49.608	Xiphophorus_maculatus