EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0032654 (Gene tree)
Gene ID: -
Gene Symbol: Nob1
Alias: 1700021I09Rik|ART-4|Nob1p|Psmd8bp1
Full Name: NIN1/RPN12 binding protein 1 homolog
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 12692 bases
Position: chr8:107185077-107197768
Accession: 1914869
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0089450	NOB1_Zn_bind	PF08772.11	4.9e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0089455	-	798	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0089454	-	1468	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0089457	-	476	-	MGP_SPRETEiJ_P0089457	61 (aa)	-	-
MGP_SPRETEiJ_T0089456	-	467	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0089451	-	2171	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0089450	-	1683	-	MGP_SPRETEiJ_P0089450	417 (aa)	-	-
MGP_SPRETEiJ_T0089453	-	878	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0089452	-	1250	-	MGP_SPRETEiJ_P0089452	159 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0032654's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0032654's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0032654	Nob1	98	88.136	ENSG00000141101	NOB1	98	92.308	Homo_sapiens
MGP_SPRETEiJ_G0032654	Nob1	83	63.584	ENSAPOG00000008241	nob1	94	63.584	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0032654	Nob1	99	83.532	ENSAMEG00000006706	NOB1	99	83.532	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0032654	Nob1	97	62.381	ENSACIG00000001503	nob1	99	63.183	Amphilophus_citrinellus
MGP_SPRETEiJ_G0032654	Nob1	98	65.207	ENSAOCG00000006533	nob1	100	65.207	Amphiprion_ocellaris
MGP_SPRETEiJ_G0032654	Nob1	98	65.207	ENSAPEG00000000032	-	100	65.450	Amphiprion_percula
MGP_SPRETEiJ_G0032654	Nob1	98	65.207	ENSAPEG00000000029	nob1	100	65.450	Amphiprion_percula
MGP_SPRETEiJ_G0032654	Nob1	98	64.878	ENSATEG00000014585	nob1	100	64.878	Anabas_testudineus
MGP_SPRETEiJ_G0032654	Nob1	98	67.221	ENSACAG00000003697	NOB1	88	67.221	Anolis_carolinensis
MGP_SPRETEiJ_G0032654	Nob1	98	86.165	ENSANAG00000036611	NOB1	100	86.408	Aotus_nancymaae
MGP_SPRETEiJ_G0032654	Nob1	97	62.676	ENSACLG00000024897	nob1	99	62.911	Astatotilapia_calliptera
MGP_SPRETEiJ_G0032654	Nob1	93	58.685	ENSAMXG00000003642	nob1	100	59.155	Astyanax_mexicanus
MGP_SPRETEiJ_G0032654	Nob1	98	85.472	ENSBTAG00000020633	NOB1	100	85.714	Bos_taurus
MGP_SPRETEiJ_G0032654	Nob1	76	42.857	WBGene00021843	Y54E10BR.4	99	32.524	Caenorhabditis_elegans
MGP_SPRETEiJ_G0032654	Nob1	98	86.408	ENSCJAG00000015230	NOB1	100	86.650	Callithrix_jacchus
MGP_SPRETEiJ_G0032654	Nob1	98	86.473	ENSCAFG00000020251	NOB1	100	86.473	Canis_familiaris
MGP_SPRETEiJ_G0032654	Nob1	98	86.473	ENSCAFG00020020297	NOB1	100	86.473	Canis_lupus_dingo
MGP_SPRETEiJ_G0032654	Nob1	98	85.539	ENSCHIG00000027022	NOB1	100	85.714	Capra_hircus
MGP_SPRETEiJ_G0032654	Nob1	98	84.709	ENSTSYG00000003084	NOB1	100	85.922	Carlito_syrichta
MGP_SPRETEiJ_G0032654	Nob1	82	83.382	ENSCAPG00000015542	NOB1	100	83.965	Cavia_aperea
MGP_SPRETEiJ_G0032654	Nob1	98	84.352	ENSCPOG00000022538	NOB1	100	84.841	Cavia_porcellus
MGP_SPRETEiJ_G0032654	Nob1	98	86.747	ENSCCAG00000023773	NOB1	100	87.229	Cebus_capucinus
MGP_SPRETEiJ_G0032654	Nob1	98	86.925	ENSCATG00000039487	NOB1	100	86.683	Cercocebus_atys
MGP_SPRETEiJ_G0032654	Nob1	82	79.240	ENSCLAG00000005926	NOB1	100	80.994	Chinchilla_lanigera
MGP_SPRETEiJ_G0032654	Nob1	98	86.683	ENSCSAG00000004158	NOB1	100	86.441	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0032654	Nob1	98	76.886	ENSCHOG00000011047	NOB1	100	76.886	Choloepus_hoffmanni
MGP_SPRETEiJ_G0032654	Nob1	98	71.059	ENSCPBG00000027035	NOB1	93	70.824	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0032654	Nob1	97	48.456	ENSCING00000023441	-	99	49.024	Ciona_intestinalis
MGP_SPRETEiJ_G0032654	Nob1	99	48.019	ENSCSAVG00000009081	-	100	48.456	Ciona_savignyi
MGP_SPRETEiJ_G0032654	Nob1	100	88.969	ENSCGRG00001009255	Nob1	97	89.928	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0032654	Nob1	98	89.706	ENSCGRG00000010869	Nob1	100	90.686	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0032654	Nob1	85	62.299	ENSCSEG00000019657	nob1	91	62.299	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0032654	Nob1	97	60.460	ENSDARG00000016080	nob1	99	61.149	Danio_rerio
MGP_SPRETEiJ_G0032654	Nob1	98	84.915	ENSDNOG00000041643	NOB1	100	84.915	Dasypus_novemcinctus
MGP_SPRETEiJ_G0032654	Nob1	98	87.255	ENSDORG00000000483	Nob1	100	87.255	Dipodomys_ordii
MGP_SPRETEiJ_G0032654	Nob1	83	43.231	FBgn0030177	CG2972	98	35.853	Drosophila_melanogaster
MGP_SPRETEiJ_G0032654	Nob1	58	73.444	ENSETEG00000000011	-	58	72.917	Echinops_telfairi
MGP_SPRETEiJ_G0032654	Nob1	97	47.174	ENSEBUG00000004464	nob1	99	46.667	Eptatretus_burgeri
MGP_SPRETEiJ_G0032654	Nob1	99	85.442	ENSEASG00005021356	NOB1	84	85.203	Equus_asinus_asinus
MGP_SPRETEiJ_G0032654	Nob1	99	84.726	ENSECAG00000023748	NOB1	82	84.487	Equus_caballus
MGP_SPRETEiJ_G0032654	Nob1	66	69.751	ENSEEUG00000014384	NOB1	66	69.751	Erinaceus_europaeus
MGP_SPRETEiJ_G0032654	Nob1	97	60.364	ENSELUG00000016199	nob1	99	59.174	Esox_lucius
MGP_SPRETEiJ_G0032654	Nob1	98	86.715	ENSFCAG00000002958	NOB1	100	86.473	Felis_catus
MGP_SPRETEiJ_G0032654	Nob1	98	83.824	ENSFDAG00000009239	NOB1	100	83.824	Fukomys_damarensis
MGP_SPRETEiJ_G0032654	Nob1	60	57.795	ENSFHEG00000007657	nob1	53	68.116	Fundulus_heteroclitus
MGP_SPRETEiJ_G0032654	Nob1	96	65.509	ENSGMOG00000010638	nob1	98	65.261	Gadus_morhua
MGP_SPRETEiJ_G0032654	Nob1	98	61.163	ENSGALG00000000693	NOB1	100	62.529	Gallus_gallus
MGP_SPRETEiJ_G0032654	Nob1	98	56.114	ENSGAFG00000006104	nob1	100	57.237	Gambusia_affinis
MGP_SPRETEiJ_G0032654	Nob1	98	63.171	ENSGACG00000017552	nob1	99	63.659	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0032654	Nob1	98	69.412	ENSGAGG00000003902	NOB1	100	69.412	Gopherus_agassizii
MGP_SPRETEiJ_G0032654	Nob1	98	87.893	ENSGGOG00000025456	NOB1	100	87.651	Gorilla_gorilla
MGP_SPRETEiJ_G0032654	Nob1	97	64.792	ENSHBUG00000002580	nob1	99	65.526	Haplochromis_burtoni
MGP_SPRETEiJ_G0032654	Nob1	98	83.333	ENSHGLG00000014260	NOB1	100	84.058	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0032654	Nob1	98	85.086	ENSHGLG00100013978	NOB1	100	85.086	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0032654	Nob1	97	61.391	ENSHCOG00000006699	nob1	99	61.391	Hippocampus_comes
MGP_SPRETEiJ_G0032654	Nob1	99	54.280	ENSIPUG00000007579	nob1	100	53.653	Ictalurus_punctatus
MGP_SPRETEiJ_G0032654	Nob1	98	88.235	ENSSTOG00000001204	NOB1	100	89.461	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0032654	Nob1	98	85.575	ENSJJAG00000015543	Nob1	100	85.575	Jaculus_jaculus
MGP_SPRETEiJ_G0032654	Nob1	98	64.904	ENSKMAG00000018220	nob1	99	64.904	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0032654	Nob1	98	68.370	ENSLBEG00000026375	nob1	100	68.370	Labrus_bergylta
MGP_SPRETEiJ_G0032654	Nob1	98	65.826	ENSLACG00000006973	NOB1	98	65.138	Latimeria_chalumnae
MGP_SPRETEiJ_G0032654	Nob1	98	58.876	ENSLOCG00000001411	nob1	99	60.000	Lepisosteus_oculatus
MGP_SPRETEiJ_G0032654	Nob1	98	85.301	ENSLAFG00000008978	NOB1	100	85.301	Loxodonta_africana
MGP_SPRETEiJ_G0032654	Nob1	98	86.650	ENSMFAG00000030131	NOB1	100	86.408	Macaca_fascicularis
MGP_SPRETEiJ_G0032654	Nob1	98	86.683	ENSMMUG00000006506	NOB1	100	86.683	Macaca_mulatta
MGP_SPRETEiJ_G0032654	Nob1	99	87.019	ENSMNEG00000028829	NOB1	100	79.903	Macaca_nemestrina
MGP_SPRETEiJ_G0032654	Nob1	98	87.167	ENSMLEG00000032913	NOB1	100	86.925	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0032654	Nob1	66	58.163	ENSMZEG00005003827	-	89	58.503	Maylandia_zebra
MGP_SPRETEiJ_G0032654	Nob1	97	65.679	ENSMZEG00005028346	nob1	99	65.679	Maylandia_zebra
MGP_SPRETEiJ_G0032654	Nob1	62	67.391	ENSMGAG00000008675	NOB1	100	70.370	Meleagris_gallopavo
MGP_SPRETEiJ_G0032654	Nob1	98	88.235	ENSMAUG00000013554	Nob1	100	88.235	Mesocricetus_auratus
MGP_SPRETEiJ_G0032654	Nob1	98	86.683	ENSMICG00000012123	NOB1	100	86.683	Microcebus_murinus
MGP_SPRETEiJ_G0032654	Nob1	98	88.725	ENSMOCG00000010370	Nob1	100	89.461	Microtus_ochrogaster
MGP_SPRETEiJ_G0032654	Nob1	98	67.554	ENSMMOG00000002120	nob1	100	66.828	Mola_mola
MGP_SPRETEiJ_G0032654	Nob1	98	73.872	ENSMODG00000002677	NOB1	100	74.347	Monodelphis_domestica
MGP_SPRETEiJ_G0032654	Nob1	98	65.281	ENSMALG00000014580	nob1	100	64.792	Monopterus_albus
MGP_SPRETEiJ_G0032654	Nob1	100	97.602	MGP_CAROLIEiJ_G0031536	Nob1	100	97.602	Mus_caroli
MGP_SPRETEiJ_G0032654	Nob1	98	98.284	ENSMUSG00000003848	Nob1	100	98.284	Mus_musculus
MGP_SPRETEiJ_G0032654	Nob1	98	96.569	MGP_PahariEiJ_G0023136	Nob1	100	96.569	Mus_pahari
MGP_SPRETEiJ_G0032654	Nob1	99	84.412	ENSMPUG00000007483	NOB1	92	84.652	Mustela_putorius_furo
MGP_SPRETEiJ_G0032654	Nob1	98	85.854	ENSMLUG00000006667	NOB1	100	85.854	Myotis_lucifugus
MGP_SPRETEiJ_G0032654	Nob1	98	89.216	ENSNGAG00000008627	Nob1	100	89.216	Nannospalax_galili
MGP_SPRETEiJ_G0032654	Nob1	98	88.378	ENSNLEG00000005572	NOB1	100	88.136	Nomascus_leucogenys
MGP_SPRETEiJ_G0032654	Nob1	76	84.356	ENSOPRG00000006721	NOB1	100	83.742	Ochotona_princeps
MGP_SPRETEiJ_G0032654	Nob1	98	82.598	ENSODEG00000014376	NOB1	100	82.598	Octodon_degus
MGP_SPRETEiJ_G0032654	Nob1	97	60.455	ENSONIG00000003319	nob1	99	61.591	Oreochromis_niloticus
MGP_SPRETEiJ_G0032654	Nob1	82	85.057	ENSOCUG00000004400	NOB1	100	85.057	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0032654	Nob1	98	65.777	ENSORLG00000018862	nob1	100	65.777	Oryzias_latipes
MGP_SPRETEiJ_G0032654	Nob1	98	65.060	ENSORLG00020014687	nob1	100	65.060	Oryzias_latipes_hni
MGP_SPRETEiJ_G0032654	Nob1	98	65.291	ENSORLG00015012156	nob1	100	65.291	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0032654	Nob1	98	58.747	ENSOMEG00000022722	nob1	100	59.179	Oryzias_melastigma
MGP_SPRETEiJ_G0032654	Nob1	98	79.369	ENSOGAG00000004590	NOB1	100	79.854	Otolemur_garnettii
MGP_SPRETEiJ_G0032654	Nob1	98	85.472	ENSOARG00000003606	NOB1	100	85.230	Ovis_aries
MGP_SPRETEiJ_G0032654	Nob1	95	80.100	ENSPPAG00000003317	-	100	79.851	Pan_paniscus
MGP_SPRETEiJ_G0032654	Nob1	98	87.651	ENSPPAG00000040257	NOB1	100	87.409	Pan_paniscus
MGP_SPRETEiJ_G0032654	Nob1	98	86.473	ENSPPRG00000016949	NOB1	100	86.715	Panthera_pardus
MGP_SPRETEiJ_G0032654	Nob1	98	86.473	ENSPTIG00000011234	NOB1	100	86.715	Panthera_tigris_altaica
MGP_SPRETEiJ_G0032654	Nob1	98	87.651	ENSPTRG00000008285	NOB1	100	87.409	Pan_troglodytes
MGP_SPRETEiJ_G0032654	Nob1	98	86.199	ENSPANG00000015858	NOB1	100	86.441	Papio_anubis
MGP_SPRETEiJ_G0032654	Nob1	99	63.357	ENSPKIG00000020293	nob1	100	63.357	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0032654	Nob1	97	67.381	ENSPSIG00000012477	NOB1	98	69.274	Pelodiscus_sinensis
MGP_SPRETEiJ_G0032654	Nob1	98	63.570	ENSPMGG00000023476	nob1	100	64.059	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0032654	Nob1	98	91.443	ENSPEMG00000010995	Nob1	100	91.443	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0032654	Nob1	82	57.967	ENSPFOG00000000027	nob1	100	58.449	Poecilia_formosa
MGP_SPRETEiJ_G0032654	Nob1	61	63.178	ENSPLAG00000011546	nob1	91	63.566	Poecilia_latipinna
MGP_SPRETEiJ_G0032654	Nob1	98	60.482	ENSPMEG00000023435	nob1	100	60.482	Poecilia_mexicana
MGP_SPRETEiJ_G0032654	Nob1	98	56.674	ENSPREG00000007675	nob1	100	56.893	Poecilia_reticulata
MGP_SPRETEiJ_G0032654	Nob1	98	86.650	ENSPPYG00000007509	NOB1	100	87.621	Pongo_abelii
MGP_SPRETEiJ_G0032654	Nob1	98	81.055	ENSPCAG00000001527	NOB1	100	81.295	Procavia_capensis
MGP_SPRETEiJ_G0032654	Nob1	98	87.775	ENSPCOG00000025515	NOB1	100	87.775	Propithecus_coquereli
MGP_SPRETEiJ_G0032654	Nob1	76	60.185	ENSPVAG00000013330	NOB1	78	59.259	Pteropus_vampyrus
MGP_SPRETEiJ_G0032654	Nob1	97	63.951	ENSPNYG00000018449	nob1	99	63.951	Pundamilia_nyererei
MGP_SPRETEiJ_G0032654	Nob1	98	56.787	ENSPNAG00000004244	nob1	99	59.080	Pygocentrus_nattereri
MGP_SPRETEiJ_G0032654	Nob1	98	92.683	ENSRNOG00000021890	Nob1	100	93.415	Rattus_norvegicus
MGP_SPRETEiJ_G0032654	Nob1	98	86.265	ENSRBIG00000019599	NOB1	100	87.409	Rhinopithecus_bieti
MGP_SPRETEiJ_G0032654	Nob1	98	86.265	ENSRROG00000033419	NOB1	100	87.409	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0032654	Nob1	82	85.014	ENSSBOG00000029042	NOB1	89	85.303	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0032654	Nob1	98	75.179	ENSSHAG00000015387	NOB1	100	76.077	Sarcophilus_harrisii
MGP_SPRETEiJ_G0032654	Nob1	98	62.989	ENSSFOG00015008503	nob1	100	64.977	Scleropages_formosus
MGP_SPRETEiJ_G0032654	Nob1	98	64.337	ENSSMAG00000003064	nob1	100	64.578	Scophthalmus_maximus
MGP_SPRETEiJ_G0032654	Nob1	98	64.251	ENSSDUG00000007307	nob1	100	64.251	Seriola_dumerili
MGP_SPRETEiJ_G0032654	Nob1	69	71.508	ENSSLDG00000011459	-	96	71.508	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0032654	Nob1	92	64.631	ENSSPUG00000005621	NOB1	99	69.540	Sphenodon_punctatus
MGP_SPRETEiJ_G0032654	Nob1	98	65.610	ENSSPAG00000022362	nob1	100	65.854	Stegastes_partitus
MGP_SPRETEiJ_G0032654	Nob1	98	85.230	ENSSSCG00000002753	NOB1	100	85.230	Sus_scrofa
MGP_SPRETEiJ_G0032654	Nob1	98	63.678	ENSTRUG00000004780	nob1	100	63.678	Takifugu_rubripes
MGP_SPRETEiJ_G0032654	Nob1	98	63.678	ENSTRUG00000023145	nob1	100	63.678	Takifugu_rubripes
MGP_SPRETEiJ_G0032654	Nob1	98	63.855	ENSTNIG00000002552	nob1	100	63.855	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0032654	Nob1	70	72.635	ENSTBEG00000000690	NOB1	62	72.635	Tupaia_belangeri
MGP_SPRETEiJ_G0032654	Nob1	60	85.156	ENSUAMG00000028135	NOB1	100	85.547	Ursus_americanus
MGP_SPRETEiJ_G0032654	Nob1	99	84.652	ENSUMAG00000018658	NOB1	95	84.892	Ursus_maritimus
MGP_SPRETEiJ_G0032654	Nob1	98	86.232	ENSVVUG00000017271	NOB1	100	86.232	Vulpes_vulpes
MGP_SPRETEiJ_G0032654	Nob1	99	60.820	ENSXETG00000017874	nob1	99	60.909	Xenopus_tropicalis
MGP_SPRETEiJ_G0032654	Nob1	82	59.710	ENSXCOG00000009734	nob1	100	59.130	Xiphophorus_couchianus
MGP_SPRETEiJ_G0032654	Nob1	98	61.429	ENSXMAG00000017371	nob1	100	60.952	Xiphophorus_maculatus