EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0032657 (Gene tree)
Gene ID: -
Gene Symbol: Zfhx3
Alias: A230102L03Rik|Atbf1|Sci|WBP9
Full Name: zinc finger homeobox 3
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 269283 bases
Position: chr8:108548431-108817713
Accession: 99948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0089461	zf-C2H2	PF00096.26	4.2e-12	1	2
MGP_SPRETEiJ_P0089461	zf-C2H2	PF00096.26	4.2e-12	2	2
MGP_SPRETEiJ_P0089461	zf-met	PF12874.7	1.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0089460	-	1184	-	MGP_SPRETEiJ_P0089460	17 (aa)	-	UPI0004621205
MGP_SPRETEiJ_T0089461	-	16456	-	MGP_SPRETEiJ_P0089461	3721 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0032657's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0032657's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0032657	Zfhx3	100	93.342	ENSG00000140836	ZFHX3	100	92.406	Homo_sapiens
MGP_SPRETEiJ_G0032657	Zfhx3	100	91.618	ENSAMEG00000002197	ZFHX3	100	92.048	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0032657	Zfhx3	97	63.317	ENSATEG00000004640	zfhx3	95	64.053	Anabas_testudineus
MGP_SPRETEiJ_G0032657	Zfhx3	95	84.854	ENSAPLG00000002327	ZFHX3	99	84.516	Anas_platyrhynchos
MGP_SPRETEiJ_G0032657	Zfhx3	100	92.771	ENSANAG00000033325	ZFHX3	100	92.719	Aotus_nancymaae
MGP_SPRETEiJ_G0032657	Zfhx3	52	64.370	ENSACLG00000001914	zfhx3	100	62.572	Astatotilapia_calliptera
MGP_SPRETEiJ_G0032657	Zfhx3	61	66.100	ENSAMXG00000004340	zfhx3	56	61.210	Astyanax_mexicanus
MGP_SPRETEiJ_G0032657	Zfhx3	100	91.526	ENSBTAG00000014636	ZFHX3	100	91.691	Bos_taurus
MGP_SPRETEiJ_G0032657	Zfhx3	100	93.387	ENSCJAG00000043080	ZFHX3	100	92.937	Callithrix_jacchus
MGP_SPRETEiJ_G0032657	Zfhx3	100	92.451	ENSCAFG00000020243	ZFHX3	100	92.131	Canis_familiaris
MGP_SPRETEiJ_G0032657	Zfhx3	100	92.355	ENSCAFG00020020336	ZFHX3	100	92.408	Canis_lupus_dingo
MGP_SPRETEiJ_G0032657	Zfhx3	100	91.402	ENSCHIG00000018446	ZFHX3	100	91.701	Capra_hircus
MGP_SPRETEiJ_G0032657	Zfhx3	100	92.166	ENSTSYG00000029930	ZFHX3	100	92.005	Carlito_syrichta
MGP_SPRETEiJ_G0032657	Zfhx3	93	100.000	ENSCAPG00000010889	ZFHX3	99	96.610	Cavia_aperea
MGP_SPRETEiJ_G0032657	Zfhx3	100	91.872	ENSCPOG00000009111	ZFHX3	100	91.638	Cavia_porcellus
MGP_SPRETEiJ_G0032657	Zfhx3	100	92.621	ENSCCAG00000026346	ZFHX3	100	92.392	Cebus_capucinus
MGP_SPRETEiJ_G0032657	Zfhx3	100	93.274	ENSCATG00000022545	ZFHX3	100	92.865	Cercocebus_atys
MGP_SPRETEiJ_G0032657	Zfhx3	100	93.569	ENSCLAG00000007000	ZFHX3	100	93.174	Chinchilla_lanigera
MGP_SPRETEiJ_G0032657	Zfhx3	100	93.242	ENSCSAG00000004171	ZFHX3	100	92.974	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0032657	Zfhx3	100	93.752	ENSCANG00000034216	ZFHX3	100	93.164	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0032657	Zfhx3	100	95.311	ENSCGRG00001012831	Zfhx3	100	95.177	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0032657	Zfhx3	100	89.608	ENSCGRG00000001001	Zfhx3	100	89.528	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0032657	Zfhx3	97	62.851	ENSCSEG00000001762	zfhx3	95	62.183	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0032657	Zfhx3	82	65.560	ENSCVAG00000000602	zfhx3	100	60.938	Cyprinodon_variegatus
MGP_SPRETEiJ_G0032657	Zfhx3	100	91.943	ENSDNOG00000046047	ZFHX3	100	91.087	Dasypus_novemcinctus
MGP_SPRETEiJ_G0032657	Zfhx3	100	92.914	ENSEASG00005021387	ZFHX3	100	92.166	Equus_asinus_asinus
MGP_SPRETEiJ_G0032657	Zfhx3	100	92.914	ENSECAG00000022984	ZFHX3	99	93.273	Equus_caballus
MGP_SPRETEiJ_G0032657	Zfhx3	84	91.976	ENSEEUG00000008705	ZFHX3	92	90.453	Erinaceus_europaeus
MGP_SPRETEiJ_G0032657	Zfhx3	100	62.297	ENSELUG00000014311	zfhx3	100	62.481	Esox_lucius
MGP_SPRETEiJ_G0032657	Zfhx3	100	93.346	ENSFCAG00000023839	ZFHX3	100	93.051	Felis_catus
MGP_SPRETEiJ_G0032657	Zfhx3	96	87.183	ENSFALG00000002706	ZFHX3	96	86.928	Ficedula_albicollis
MGP_SPRETEiJ_G0032657	Zfhx3	100	92.127	ENSFDAG00000015753	ZFHX3	100	91.193	Fukomys_damarensis
MGP_SPRETEiJ_G0032657	Zfhx3	97	62.927	ENSFHEG00000013474	zfhx3	100	68.510	Fundulus_heteroclitus
MGP_SPRETEiJ_G0032657	Zfhx3	85	65.645	ENSGMOG00000002909	zfhx3	96	63.913	Gadus_morhua
MGP_SPRETEiJ_G0032657	Zfhx3	100	85.076	ENSGALG00000000713	ZFHX3	100	85.256	Gallus_gallus
MGP_SPRETEiJ_G0032657	Zfhx3	97	63.103	ENSGAFG00000017278	zfhx3	95	63.672	Gambusia_affinis
MGP_SPRETEiJ_G0032657	Zfhx3	100	62.125	ENSGACG00000015779	zfhx3	100	62.279	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0032657	Zfhx3	100	84.419	ENSGAGG00000002102	ZFHX3	100	85.845	Gopherus_agassizii
MGP_SPRETEiJ_G0032657	Zfhx3	99	93.283	ENSGGOG00000012083	ZFHX3	100	92.482	Gorilla_gorilla
MGP_SPRETEiJ_G0032657	Zfhx3	52	64.370	ENSHBUG00000013200	zfhx3	100	62.522	Haplochromis_burtoni
MGP_SPRETEiJ_G0032657	Zfhx3	100	92.553	ENSHGLG00000012541	ZFHX3	100	91.832	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0032657	Zfhx3	100	91.990	ENSHGLG00100000797	ZFHX3	100	91.403	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0032657	Zfhx3	71	67.332	ENSHCOG00000003135	zfhx3	82	64.980	Hippocampus_comes
MGP_SPRETEiJ_G0032657	Zfhx3	97	63.989	ENSIPUG00000006119	zfhx3	95	64.598	Ictalurus_punctatus
MGP_SPRETEiJ_G0032657	Zfhx3	100	93.339	ENSSTOG00000027206	ZFHX3	100	92.964	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0032657	Zfhx3	86	64.550	ENSKMAG00000006781	zfhx3	95	63.677	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0032657	Zfhx3	97	66.406	ENSLOCG00000004206	zfhx3	100	64.731	Lepisosteus_oculatus
MGP_SPRETEiJ_G0032657	Zfhx3	100	92.450	ENSLAFG00000017476	ZFHX3	100	92.450	Loxodonta_africana
MGP_SPRETEiJ_G0032657	Zfhx3	100	94.070	ENSMFAG00000034225	ZFHX3	100	93.078	Macaca_fascicularis
MGP_SPRETEiJ_G0032657	Zfhx3	100	93.990	ENSMMUG00000021041	ZFHX3	100	92.595	Macaca_mulatta
MGP_SPRETEiJ_G0032657	Zfhx3	100	94.018	ENSMNEG00000030137	ZFHX3	100	92.999	Macaca_nemestrina
MGP_SPRETEiJ_G0032657	Zfhx3	100	93.696	ENSMLEG00000042563	ZFHX3	100	92.895	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0032657	Zfhx3	86	64.158	ENSMAMG00000021509	zfhx3	95	64.280	Mastacembelus_armatus
MGP_SPRETEiJ_G0032657	Zfhx3	52	64.272	ENSMZEG00005014216	zfhx3	100	62.522	Maylandia_zebra
MGP_SPRETEiJ_G0032657	Zfhx3	100	93.952	ENSMAUG00000000602	Zfhx3	100	94.623	Mesocricetus_auratus
MGP_SPRETEiJ_G0032657	Zfhx3	100	93.214	ENSMICG00000003537	ZFHX3	100	93.214	Microcebus_murinus
MGP_SPRETEiJ_G0032657	Zfhx3	100	94.685	ENSMOCG00000017998	Zfhx3	100	94.505	Microtus_ochrogaster
MGP_SPRETEiJ_G0032657	Zfhx3	86	65.193	ENSMMOG00000016551	zfhx3	95	64.318	Mola_mola
MGP_SPRETEiJ_G0032657	Zfhx3	100	99.517	ENSMUSG00000038872	Zfhx3	100	99.517	Mus_musculus
MGP_SPRETEiJ_G0032657	Zfhx3	100	98.525	MGP_PahariEiJ_G0023139	Zfhx3	100	98.525	Mus_pahari
MGP_SPRETEiJ_G0032657	Zfhx3	57	93.310	ENSMPUG00000007747	ZFHX3	100	89.790	Mustela_putorius_furo
MGP_SPRETEiJ_G0032657	Zfhx3	100	92.083	ENSMLUG00000016100	ZFHX3	100	91.948	Myotis_lucifugus
MGP_SPRETEiJ_G0032657	Zfhx3	100	91.517	ENSNGAG00000001724	Zfhx3	100	91.248	Nannospalax_galili
MGP_SPRETEiJ_G0032657	Zfhx3	52	64.286	ENSNBRG00000010822	zfhx3	100	62.390	Neolamprologus_brichardi
MGP_SPRETEiJ_G0032657	Zfhx3	88	91.784	ENSNLEG00000032567	ZFHX3	99	100.000	Nomascus_leucogenys
MGP_SPRETEiJ_G0032657	Zfhx3	100	90.761	ENSODEG00000014257	ZFHX3	100	90.628	Octodon_degus
MGP_SPRETEiJ_G0032657	Zfhx3	93	64.614	ENSONIG00000005914	zfhx3	98	71.910	Oreochromis_niloticus
MGP_SPRETEiJ_G0032657	Zfhx3	86	90.028	ENSOANG00000005084	ZFHX3	100	88.400	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0032657	Zfhx3	87	92.065	ENSOCUG00000017910	-	99	92.158	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0032657	Zfhx3	82	65.870	ENSORLG00000007874	zfhx3	95	63.134	Oryzias_latipes
MGP_SPRETEiJ_G0032657	Zfhx3	97	63.023	ENSORLG00020009729	zfhx3	95	63.134	Oryzias_latipes_hni
MGP_SPRETEiJ_G0032657	Zfhx3	97	62.738	ENSORLG00015007912	zfhx3	86	64.267	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0032657	Zfhx3	97	62.783	ENSOMEG00000001800	zfhx3	95	63.320	Oryzias_melastigma
MGP_SPRETEiJ_G0032657	Zfhx3	100	92.163	ENSPPRG00000005184	ZFHX3	100	92.217	Panthera_pardus
MGP_SPRETEiJ_G0032657	Zfhx3	100	93.249	ENSPTRG00000008340	ZFHX3	100	92.660	Pan_troglodytes
MGP_SPRETEiJ_G0032657	Zfhx3	100	94.067	ENSPANG00000010456	ZFHX3	100	93.396	Papio_anubis
MGP_SPRETEiJ_G0032657	Zfhx3	90	74.104	ENSPKIG00000009598	zfhx3	93	65.257	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0032657	Zfhx3	84	64.860	ENSPKIG00000001525	-	95	62.802	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0032657	Zfhx3	100	95.983	ENSPEMG00000010630	Zfhx3	100	95.983	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0032657	Zfhx3	97	62.909	ENSPFOG00000001702	zfhx3	95	63.887	Poecilia_formosa
MGP_SPRETEiJ_G0032657	Zfhx3	97	63.266	ENSPLAG00000018955	zfhx3	95	64.129	Poecilia_latipinna
MGP_SPRETEiJ_G0032657	Zfhx3	97	62.971	ENSPMEG00000022333	zfhx3	95	63.976	Poecilia_mexicana
MGP_SPRETEiJ_G0032657	Zfhx3	86	94.048	ENSPPYG00000007513	ZFHX3	100	93.423	Pongo_abelii
MGP_SPRETEiJ_G0032657	Zfhx3	87	90.845	ENSPCAG00000010600	ZFHX3	99	90.290	Procavia_capensis
MGP_SPRETEiJ_G0032657	Zfhx3	100	93.054	ENSPCOG00000025382	ZFHX3	100	93.162	Propithecus_coquereli
MGP_SPRETEiJ_G0032657	Zfhx3	96	91.749	ENSPVAG00000006664	ZFHX3	96	92.079	Pteropus_vampyrus
MGP_SPRETEiJ_G0032657	Zfhx3	52	63.845	ENSPNYG00000013409	zfhx3	100	62.315	Pundamilia_nyererei
MGP_SPRETEiJ_G0032657	Zfhx3	100	97.244	ENSRNOG00000014452	Zfhx3	100	97.244	Rattus_norvegicus
MGP_SPRETEiJ_G0032657	Zfhx3	100	92.654	ENSRBIG00000031579	ZFHX3	100	91.932	Rhinopithecus_bieti
MGP_SPRETEiJ_G0032657	Zfhx3	100	93.969	ENSRROG00000039904	ZFHX3	100	93.167	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0032657	Zfhx3	91	93.302	ENSSBOG00000034332	ZFHX3	96	93.363	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0032657	Zfhx3	93	73.333	ENSSFOG00015014986	zfhx3	88	72.222	Scleropages_formosus
MGP_SPRETEiJ_G0032657	Zfhx3	84	65.531	ENSSFOG00015019511	zfhx3	98	63.107	Scleropages_formosus
MGP_SPRETEiJ_G0032657	Zfhx3	97	64.209	ENSSDUG00000017102	zfhx3	100	71.739	Seriola_dumerili
MGP_SPRETEiJ_G0032657	Zfhx3	86	64.950	ENSSPAG00000002113	zfhx3	100	62.795	Stegastes_partitus
MGP_SPRETEiJ_G0032657	Zfhx3	100	91.975	ENSSSCG00000002752	ZFHX3	100	91.447	Sus_scrofa
MGP_SPRETEiJ_G0032657	Zfhx3	95	84.581	ENSTGUG00000008190	ZFHX3	94	84.781	Taeniopygia_guttata
MGP_SPRETEiJ_G0032657	Zfhx3	86	64.800	ENSTRUG00000017601	zfhx3	95	64.071	Takifugu_rubripes
MGP_SPRETEiJ_G0032657	Zfhx3	100	92.457	ENSVVUG00000017344	ZFHX3	100	91.871	Vulpes_vulpes