EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0032780 (Gene tree)
Gene ID: -
Gene Symbol: Snai3
Alias: Smuc|Snail-related gene from muscle cells|Zfp293
Full Name: snail family zinc finger 3
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 6519 bases
Position: chr8:123206298-123212816
Accession: 1353563
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0089880	zf-C2H2	PF00096.26	3.2e-24	1	4
MGP_SPRETEiJ_P0089880	zf-C2H2	PF00096.26	3.2e-24	2	4
MGP_SPRETEiJ_P0089880	zf-C2H2	PF00096.26	3.2e-24	3	4
MGP_SPRETEiJ_P0089880	zf-C2H2	PF00096.26	3.2e-24	4	4
MGP_SPRETEiJ_P0089880	zf-met	PF12874.7	3.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0089880	-	1587	-	MGP_SPRETEiJ_P0089880	287 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0032780's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0032780's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0032780	Snai3	99	46.552	MGP_SPRETEiJ_G0021379	Snai2	99	46.599
MGP_SPRETEiJ_G0032780	Snai3	100	41.000	MGP_SPRETEiJ_G0025629	Snai1	99	41.667
MGP_SPRETEiJ_G0032780	Snai3	67	47.297	MGP_SPRETEiJ_G0023360	Zfp236	57	36.242
MGP_SPRETEiJ_G0032780	Snai3	55	42.336	MGP_SPRETEiJ_G0029467	Prdm5	68	48.544

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0032780	Snai3	100	71.233	ENSG00000185669	SNAI3	100	73.288	Homo_sapiens
MGP_SPRETEiJ_G0032780	Snai3	100	72.945	ENSANAG00000032748	SNAI3	100	72.945	Aotus_nancymaae
MGP_SPRETEiJ_G0032780	Snai3	99	46.207	ENSANAG00000021163	SNAI2	99	46.939	Aotus_nancymaae
MGP_SPRETEiJ_G0032780	Snai3	99	66.090	ENSBTAG00000017528	SNAI3	99	66.090	Bos_taurus
MGP_SPRETEiJ_G0032780	Snai3	100	64.726	ENSCAFG00000029458	SNAI3	100	66.781	Canis_familiaris
MGP_SPRETEiJ_G0032780	Snai3	100	65.068	ENSCAFG00020004719	SNAI3	100	67.123	Canis_lupus_dingo
MGP_SPRETEiJ_G0032780	Snai3	99	65.744	ENSCHIG00000018087	SNAI3	99	65.744	Capra_hircus
MGP_SPRETEiJ_G0032780	Snai3	91	68.061	ENSTSYG00000025594	SNAI3	91	69.962	Carlito_syrichta
MGP_SPRETEiJ_G0032780	Snai3	100	72.260	ENSCATG00000031714	SNAI3	100	72.260	Cercocebus_atys
MGP_SPRETEiJ_G0032780	Snai3	100	67.466	ENSCSAG00000003047	SNAI3	100	67.466	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0032780	Snai3	99	56.902	ENSCPBG00000023474	SNAI3	99	56.902	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0032780	Snai3	93	70.480	ENSCANG00000031124	SNAI3	83	70.480	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0032780	Snai3	100	87.456	ENSCGRG00001011389	Snai3	100	87.456	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0032780	Snai3	100	87.456	ENSCGRG00000014932	Snai3	100	87.456	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0032780	Snai3	79	48.485	ENSDNOG00000035204	-	100	51.515	Dasypus_novemcinctus
MGP_SPRETEiJ_G0032780	Snai3	92	67.164	ENSEASG00005000614	SNAI3	88	69.403	Equus_asinus_asinus
MGP_SPRETEiJ_G0032780	Snai3	99	68.729	ENSECAG00000012131	SNAI3	99	70.790	Equus_caballus
MGP_SPRETEiJ_G0032780	Snai3	100	61.301	ENSEEUG00000000841	SNAI3	100	61.301	Erinaceus_europaeus
MGP_SPRETEiJ_G0032780	Snai3	99	49.141	ENSELUG00000018742	-	99	49.141	Esox_lucius
MGP_SPRETEiJ_G0032780	Snai3	99	44.595	ENSELUG00000021795	SNAI2	78	45.608	Esox_lucius
MGP_SPRETEiJ_G0032780	Snai3	100	64.605	ENSFCAG00000043885	SNAI3	100	64.605	Felis_catus
MGP_SPRETEiJ_G0032780	Snai3	99	57.143	ENSGAGG00000023571	SNAI3	99	57.143	Gopherus_agassizii
MGP_SPRETEiJ_G0032780	Snai3	100	71.918	ENSGGOG00000012559	SNAI3	100	73.973	Gorilla_gorilla
MGP_SPRETEiJ_G0032780	Snai3	99	45.161	ENSIPUG00000000131	snai2	99	47.931	Ictalurus_punctatus
MGP_SPRETEiJ_G0032780	Snai3	100	77.740	ENSJJAG00000019934	Snai3	100	79.452	Jaculus_jaculus
MGP_SPRETEiJ_G0032780	Snai3	99	46.713	ENSLOCG00000005992	SNAI2	99	47.059	Lepisosteus_oculatus
MGP_SPRETEiJ_G0032780	Snai3	100	66.096	ENSLAFG00000005117	SNAI3	100	67.466	Loxodonta_africana
MGP_SPRETEiJ_G0032780	Snai3	100	72.945	ENSMFAG00000032064	SNAI3	100	72.945	Macaca_fascicularis
MGP_SPRETEiJ_G0032780	Snai3	100	72.945	ENSMMUG00000008716	SNAI3	100	72.945	Macaca_mulatta
MGP_SPRETEiJ_G0032780	Snai3	100	72.945	ENSMNEG00000045515	SNAI3	100	72.945	Macaca_nemestrina
MGP_SPRETEiJ_G0032780	Snai3	91	71.161	ENSMLEG00000033191	SNAI3	91	71.161	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0032780	Snai3	100	87.108	ENSMAUG00000001685	Snai3	100	87.108	Mesocricetus_auratus
MGP_SPRETEiJ_G0032780	Snai3	100	86.760	ENSMOCG00000003536	Snai3	100	86.760	Microtus_ochrogaster
MGP_SPRETEiJ_G0032780	Snai3	99	46.552	MGP_CAROLIEiJ_G0020483	Snai2	99	46.599	Mus_caroli
MGP_SPRETEiJ_G0032780	Snai3	100	97.909	MGP_CAROLIEiJ_G0031662	Snai3	100	97.909	Mus_caroli
MGP_SPRETEiJ_G0032780	Snai3	99	46.552	ENSMUSG00000022676	Snai2	99	46.599	Mus_musculus
MGP_SPRETEiJ_G0032780	Snai3	100	99.652	ENSMUSG00000006587	Snai3	100	99.652	Mus_musculus
MGP_SPRETEiJ_G0032780	Snai3	99	46.552	MGP_PahariEiJ_G0016188	Snai2	99	46.599	Mus_pahari
MGP_SPRETEiJ_G0032780	Snai3	100	95.486	MGP_PahariEiJ_G0023260	Snai3	100	95.486	Mus_pahari
MGP_SPRETEiJ_G0032780	Snai3	100	61.724	ENSMPUG00000008104	SNAI3	100	63.793	Mustela_putorius_furo
MGP_SPRETEiJ_G0032780	Snai3	100	77.288	ENSNGAG00000023039	Snai3	100	77.288	Nannospalax_galili
MGP_SPRETEiJ_G0032780	Snai3	100	72.260	ENSNLEG00000000595	SNAI3	100	74.315	Nomascus_leucogenys
MGP_SPRETEiJ_G0032780	Snai3	100	65.411	ENSOGAG00000000419	SNAI3	100	68.475	Otolemur_garnettii
MGP_SPRETEiJ_G0032780	Snai3	90	46.642	ENSOARG00000013069	-	99	46.642	Ovis_aries
MGP_SPRETEiJ_G0032780	Snai3	100	71.233	ENSPPAG00000043301	SNAI3	100	73.288	Pan_paniscus
MGP_SPRETEiJ_G0032780	Snai3	99	64.460	ENSPPRG00000008511	SNAI3	99	64.460	Panthera_pardus
MGP_SPRETEiJ_G0032780	Snai3	100	71.233	ENSPTRG00000008460	SNAI3	100	73.288	Pan_troglodytes
MGP_SPRETEiJ_G0032780	Snai3	100	72.603	ENSPANG00000000509	SNAI3	100	72.603	Papio_anubis
MGP_SPRETEiJ_G0032780	Snai3	99	49.837	ENSPKIG00000007872	SNAI3	99	49.837	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0032780	Snai3	76	58.261	ENSPSIG00000004262	SNAI3	91	58.261	Pelodiscus_sinensis
MGP_SPRETEiJ_G0032780	Snai3	100	71.575	ENSPPYG00000007643	SNAI3	100	73.630	Pongo_abelii
MGP_SPRETEiJ_G0032780	Snai3	100	91.638	ENSRNOG00000013586	Snai3	100	91.638	Rattus_norvegicus
MGP_SPRETEiJ_G0032780	Snai3	100	72.945	ENSRBIG00000025770	SNAI3	100	72.945	Rhinopithecus_bieti
MGP_SPRETEiJ_G0032780	Snai3	100	72.603	ENSRROG00000032757	SNAI3	100	72.603	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0032780	Snai3	99	44.444	ENSSFOG00015016115	snai3	93	46.580	Scleropages_formosus
MGP_SPRETEiJ_G0032780	Snai3	99	45.638	ENSSFOG00015018025	SNAI2	99	47.458	Scleropages_formosus
MGP_SPRETEiJ_G0032780	Snai3	99	63.946	ENSTTRG00000006262	SNAI3	99	63.946	Tursiops_truncatus
MGP_SPRETEiJ_G0032780	Snai3	100	66.781	ENSUAMG00000020030	SNAI3	100	68.493	Ursus_americanus
MGP_SPRETEiJ_G0032780	Snai3	100	65.411	ENSVVUG00000003233	SNAI3	100	67.466	Vulpes_vulpes