EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0032846 (Gene tree)
Gene ID: -
Gene Symbol: Tarbp1
Alias: Gm17296
Full Name: TAR RNA binding protein 1
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 54616 bases
Position: chr8:127291279-127345894
Accession: 4936930
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0090107	SpoU_methylase	PF00588.19	1.4e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0090107	-	5060	-	MGP_SPRETEiJ_P0090107	1579 (aa)	-	-
MGP_SPRETEiJ_T0090108	-	1432	-	MGP_SPRETEiJ_P0090108	399 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0032846's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0032846's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0032846	Tarbp1	99	72.688	ENSG00000059588	TARBP1	99	72.626	Homo_sapiens
MGP_SPRETEiJ_G0032846	Tarbp1	99	41.798	ENSAPOG00000016419	si:dkey-85a20.4	86	44.781	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0032846	Tarbp1	86	76.414	ENSAMEG00000003359	TARBP1	99	76.414	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0032846	Tarbp1	95	42.584	ENSATEG00000020266	si:dkey-85a20.4	94	42.584	Anabas_testudineus
MGP_SPRETEiJ_G0032846	Tarbp1	85	61.870	ENSAPLG00000007666	TARBP1	99	62.729	Anas_platyrhynchos
MGP_SPRETEiJ_G0032846	Tarbp1	98	54.016	ENSACAG00000001142	TARBP1	98	54.293	Anolis_carolinensis
MGP_SPRETEiJ_G0032846	Tarbp1	93	73.060	ENSANAG00000022031	TARBP1	99	68.401	Aotus_nancymaae
MGP_SPRETEiJ_G0032846	Tarbp1	99	71.508	ENSBTAG00000004517	TARBP1	99	76.758	Bos_taurus
MGP_SPRETEiJ_G0032846	Tarbp1	99	72.239	ENSCJAG00000018155	TARBP1	99	72.301	Callithrix_jacchus
MGP_SPRETEiJ_G0032846	Tarbp1	90	73.950	ENSCAFG00000011533	TARBP1	99	74.450	Canis_familiaris
MGP_SPRETEiJ_G0032846	Tarbp1	99	71.305	ENSCAFG00020027141	TARBP1	99	71.738	Canis_lupus_dingo
MGP_SPRETEiJ_G0032846	Tarbp1	99	70.874	ENSCHIG00000011437	TARBP1	100	71.121	Capra_hircus
MGP_SPRETEiJ_G0032846	Tarbp1	83	75.515	ENSTSYG00000010382	TARBP1	97	75.515	Carlito_syrichta
MGP_SPRETEiJ_G0032846	Tarbp1	81	67.214	ENSCAPG00000010831	TARBP1	100	67.449	Cavia_aperea
MGP_SPRETEiJ_G0032846	Tarbp1	100	72.260	ENSCPOG00000013995	TARBP1	100	73.325	Cavia_porcellus
MGP_SPRETEiJ_G0032846	Tarbp1	99	72.407	ENSCCAG00000037278	TARBP1	99	72.593	Cebus_capucinus
MGP_SPRETEiJ_G0032846	Tarbp1	99	72.301	ENSCATG00000011754	TARBP1	99	72.610	Cercocebus_atys
MGP_SPRETEiJ_G0032846	Tarbp1	85	76.970	ENSCLAG00000003655	TARBP1	99	77.200	Chinchilla_lanigera
MGP_SPRETEiJ_G0032846	Tarbp1	81	76.484	ENSCSAG00000010100	TARBP1	99	76.484	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0032846	Tarbp1	94	60.586	ENSCPBG00000005587	TARBP1	98	60.826	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0032846	Tarbp1	86	76.233	ENSCANG00000034343	TARBP1	99	76.233	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0032846	Tarbp1	99	88.452	ENSCGRG00001016690	Tarbp1	99	88.452	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0032846	Tarbp1	98	87.978	ENSCGRG00000016893	Tarbp1	99	87.978	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0032846	Tarbp1	99	39.914	ENSCSEG00000005255	si:dkey-85a20.4	99	46.347	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0032846	Tarbp1	89	45.098	ENSDARG00000079055	si:dkey-85a20.4	99	54.811	Danio_rerio
MGP_SPRETEiJ_G0032846	Tarbp1	99	69.964	ENSDNOG00000008637	TARBP1	99	70.164	Dasypus_novemcinctus
MGP_SPRETEiJ_G0032846	Tarbp1	82	74.420	ENSDORG00000007984	Tarbp1	100	74.420	Dipodomys_ordii
MGP_SPRETEiJ_G0032846	Tarbp1	100	73.573	ENSEASG00005000252	TARBP1	100	73.821	Equus_asinus_asinus
MGP_SPRETEiJ_G0032846	Tarbp1	100	73.153	ENSECAG00000023673	TARBP1	100	75.192	Equus_caballus
MGP_SPRETEiJ_G0032846	Tarbp1	99	41.023	ENSELUG00000012193	si:dkey-85a20.4	86	44.248	Esox_lucius
MGP_SPRETEiJ_G0032846	Tarbp1	100	69.169	ENSFCAG00000014183	TARBP1	100	69.538	Felis_catus
MGP_SPRETEiJ_G0032846	Tarbp1	82	63.085	ENSFALG00000013565	TARBP1	99	63.045	Ficedula_albicollis
MGP_SPRETEiJ_G0032846	Tarbp1	81	73.491	ENSFDAG00000001308	TARBP1	99	73.644	Fukomys_damarensis
MGP_SPRETEiJ_G0032846	Tarbp1	99	37.074	ENSFHEG00000007565	si:dkey-85a20.4	78	54.167	Fundulus_heteroclitus
MGP_SPRETEiJ_G0032846	Tarbp1	85	43.858	ENSGMOG00000004549	si:dkey-85a20.4	98	43.931	Gadus_morhua
MGP_SPRETEiJ_G0032846	Tarbp1	99	54.966	ENSGALG00000011000	TARBP1	99	56.000	Gallus_gallus
MGP_SPRETEiJ_G0032846	Tarbp1	92	42.790	ENSGAFG00000007387	si:dkey-85a20.4	90	42.790	Gambusia_affinis
MGP_SPRETEiJ_G0032846	Tarbp1	88	44.755	ENSGACG00000005865	si:dkey-85a20.4	99	44.825	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0032846	Tarbp1	99	62.210	ENSGAGG00000012102	TARBP1	99	62.250	Gopherus_agassizii
MGP_SPRETEiJ_G0032846	Tarbp1	87	73.961	ENSGGOG00000022879	TARBP1	99	73.961	Gorilla_gorilla
MGP_SPRETEiJ_G0032846	Tarbp1	87	45.378	ENSHBUG00000008877	si:dkey-85a20.4	85	45.378	Haplochromis_burtoni
MGP_SPRETEiJ_G0032846	Tarbp1	99	73.774	ENSHGLG00000011592	TARBP1	99	74.528	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0032846	Tarbp1	97	74.532	ENSHGLG00100015169	TARBP1	99	74.669	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0032846	Tarbp1	87	42.500	ENSIPUG00000005249	si:dkey-85a20.4	83	42.511	Ictalurus_punctatus
MGP_SPRETEiJ_G0032846	Tarbp1	89	74.330	ENSSTOG00000032291	TARBP1	99	74.405	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0032846	Tarbp1	97	73.478	ENSJJAG00000017840	Tarbp1	99	73.478	Jaculus_jaculus
MGP_SPRETEiJ_G0032846	Tarbp1	79	47.563	ENSKMAG00000017546	si:dkey-85a20.4	82	47.563	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0032846	Tarbp1	67	49.465	ENSLBEG00000012132	si:dkey-85a20.4	86	49.465	Labrus_bergylta
MGP_SPRETEiJ_G0032846	Tarbp1	99	48.869	ENSLACG00000004337	TARBP1	99	48.960	Latimeria_chalumnae
MGP_SPRETEiJ_G0032846	Tarbp1	99	45.571	ENSLOCG00000016214	si:dkey-85a20.4	100	45.388	Lepisosteus_oculatus
MGP_SPRETEiJ_G0032846	Tarbp1	96	69.791	ENSLAFG00000011394	TARBP1	99	70.873	Loxodonta_africana
MGP_SPRETEiJ_G0032846	Tarbp1	99	70.717	ENSMFAG00000041068	TARBP1	99	70.841	Macaca_fascicularis
MGP_SPRETEiJ_G0032846	Tarbp1	99	70.197	ENSMMUG00000021703	TARBP1	99	70.259	Macaca_mulatta
MGP_SPRETEiJ_G0032846	Tarbp1	99	72.424	ENSMNEG00000045002	TARBP1	99	72.486	Macaca_nemestrina
MGP_SPRETEiJ_G0032846	Tarbp1	86	76.219	ENSMLEG00000044182	TARBP1	99	76.219	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0032846	Tarbp1	93	43.083	ENSMAMG00000021760	si:dkey-85a20.4	93	43.083	Mastacembelus_armatus
MGP_SPRETEiJ_G0032846	Tarbp1	87	45.448	ENSMZEG00005005751	si:dkey-85a20.4	85	45.448	Maylandia_zebra
MGP_SPRETEiJ_G0032846	Tarbp1	99	87.310	ENSMAUG00000020968	Tarbp1	99	87.310	Mesocricetus_auratus
MGP_SPRETEiJ_G0032846	Tarbp1	99	65.842	ENSMICG00000015280	TARBP1	99	66.048	Microcebus_murinus
MGP_SPRETEiJ_G0032846	Tarbp1	99	86.849	ENSMOCG00000004128	Tarbp1	99	86.849	Microtus_ochrogaster
MGP_SPRETEiJ_G0032846	Tarbp1	99	41.093	ENSMMOG00000007795	si:dkey-85a20.4	99	41.400	Mola_mola
MGP_SPRETEiJ_G0032846	Tarbp1	99	63.559	ENSMODG00000008504	TARBP1	99	63.576	Monodelphis_domestica
MGP_SPRETEiJ_G0032846	Tarbp1	99	41.759	ENSMALG00000002916	si:dkey-85a20.4	85	44.756	Monopterus_albus
MGP_SPRETEiJ_G0032846	Tarbp1	100	96.833	MGP_CAROLIEiJ_G0031729	Tarbp1	100	96.833	Mus_caroli
MGP_SPRETEiJ_G0032846	Tarbp1	100	98.543	ENSMUSG00000090290	Tarbp1	100	98.543	Mus_musculus
MGP_SPRETEiJ_G0032846	Tarbp1	100	95.572	MGP_PahariEiJ_G0023326	Tarbp1	100	95.572	Mus_pahari
MGP_SPRETEiJ_G0032846	Tarbp1	79	75.000	ENSMPUG00000002802	TARBP1	99	75.000	Mustela_putorius_furo
MGP_SPRETEiJ_G0032846	Tarbp1	86	70.864	ENSMLUG00000002414	TARBP1	99	71.074	Myotis_lucifugus
MGP_SPRETEiJ_G0032846	Tarbp1	99	72.626	ENSNLEG00000002518	TARBP1	99	72.565	Nomascus_leucogenys
MGP_SPRETEiJ_G0032846	Tarbp1	66	72.318	ENSMEUG00000011370	-	67	72.318	Notamacropus_eugenii
MGP_SPRETEiJ_G0032846	Tarbp1	72	78.833	ENSOPRG00000013822	TARBP1	71	78.833	Ochotona_princeps
MGP_SPRETEiJ_G0032846	Tarbp1	99	71.537	ENSODEG00000005238	TARBP1	99	71.664	Octodon_degus
MGP_SPRETEiJ_G0032846	Tarbp1	87	45.095	ENSONIG00000009789	si:dkey-85a20.4	99	45.095	Oreochromis_niloticus
MGP_SPRETEiJ_G0032846	Tarbp1	99	72.508	ENSOCUG00000017418	TARBP1	99	72.755	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0032846	Tarbp1	87	44.122	ENSORLG00000010529	si:dkey-85a20.4	85	44.122	Oryzias_latipes
MGP_SPRETEiJ_G0032846	Tarbp1	87	43.870	ENSORLG00020019264	si:dkey-85a20.4	85	43.870	Oryzias_latipes_hni
MGP_SPRETEiJ_G0032846	Tarbp1	87	43.635	ENSORLG00015003276	si:dkey-85a20.4	85	43.635	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0032846	Tarbp1	99	69.746	ENSOGAG00000002379	TARBP1	99	69.808	Otolemur_garnettii
MGP_SPRETEiJ_G0032846	Tarbp1	92	73.371	ENSOARG00000003434	TARBP1	99	68.730	Ovis_aries
MGP_SPRETEiJ_G0032846	Tarbp1	86	76.652	ENSPPAG00000028097	TARBP1	99	76.652	Pan_paniscus
MGP_SPRETEiJ_G0032846	Tarbp1	100	68.057	ENSPPRG00000013561	TARBP1	100	68.057	Panthera_pardus
MGP_SPRETEiJ_G0032846	Tarbp1	85	74.944	ENSPTIG00000009281	TARBP1	100	74.944	Panthera_tigris_altaica
MGP_SPRETEiJ_G0032846	Tarbp1	99	72.520	ENSPTRG00000002124	TARBP1	99	72.582	Pan_troglodytes
MGP_SPRETEiJ_G0032846	Tarbp1	99	72.671	ENSPANG00000021933	TARBP1	99	72.733	Papio_anubis
MGP_SPRETEiJ_G0032846	Tarbp1	100	42.832	ENSPKIG00000016716	si:dkey-85a20.4	84	46.620	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0032846	Tarbp1	81	64.458	ENSPSIG00000010699	TARBP1	99	64.458	Pelodiscus_sinensis
MGP_SPRETEiJ_G0032846	Tarbp1	100	87.964	ENSPEMG00000006888	Tarbp1	100	87.964	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0032846	Tarbp1	90	81.500	ENSPCIG00000029710	TARBP1	98	81.500	Phascolarctos_cinereus
MGP_SPRETEiJ_G0032846	Tarbp1	87	43.856	ENSPFOG00000013020	si:dkey-85a20.4	99	43.927	Poecilia_formosa
MGP_SPRETEiJ_G0032846	Tarbp1	87	43.799	ENSPLAG00000006044	si:dkey-85a20.4	85	43.816	Poecilia_latipinna
MGP_SPRETEiJ_G0032846	Tarbp1	87	43.861	ENSPMEG00000017857	si:dkey-85a20.4	85	43.932	Poecilia_mexicana
MGP_SPRETEiJ_G0032846	Tarbp1	87	44.122	ENSPREG00000022753	si:dkey-85a20.4	85	44.193	Poecilia_reticulata
MGP_SPRETEiJ_G0032846	Tarbp1	91	75.248	ENSPPYG00000000102	TARBP1	99	75.181	Pongo_abelii
MGP_SPRETEiJ_G0032846	Tarbp1	85	87.838	ENSPCAG00000004808	TARBP1	85	87.838	Procavia_capensis
MGP_SPRETEiJ_G0032846	Tarbp1	99	70.260	ENSPCOG00000005666	TARBP1	99	70.384	Propithecus_coquereli
MGP_SPRETEiJ_G0032846	Tarbp1	99	60.910	ENSPVAG00000014798	TARBP1	99	61.534	Pteropus_vampyrus
MGP_SPRETEiJ_G0032846	Tarbp1	87	44.421	ENSPNYG00000019135	si:dkey-85a20.4	85	44.421	Pundamilia_nyererei
MGP_SPRETEiJ_G0032846	Tarbp1	100	86.764	ENSRNOG00000053574	Tarbp1	100	86.764	Rattus_norvegicus
MGP_SPRETEiJ_G0032846	Tarbp1	93	78.788	ENSRBIG00000043362	TARBP1	99	78.788	Rhinopithecus_bieti
MGP_SPRETEiJ_G0032846	Tarbp1	99	70.805	ENSRROG00000029527	TARBP1	99	71.169	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0032846	Tarbp1	88	76.261	ENSSBOG00000034503	TARBP1	99	76.261	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0032846	Tarbp1	85	68.452	ENSSHAG00000000013	TARBP1	99	68.452	Sarcophilus_harrisii
MGP_SPRETEiJ_G0032846	Tarbp1	86	45.291	ENSSFOG00015002660	si:dkey-85a20.4	97	46.444	Scleropages_formosus
MGP_SPRETEiJ_G0032846	Tarbp1	86	45.403	ENSSMAG00000007081	si:dkey-85a20.4	82	45.474	Scophthalmus_maximus
MGP_SPRETEiJ_G0032846	Tarbp1	100	41.159	ENSSDUG00000023566	si:dkey-85a20.4	99	41.402	Seriola_dumerili
MGP_SPRETEiJ_G0032846	Tarbp1	87	45.346	ENSSLDG00000020200	si:dkey-85a20.4	86	45.346	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0032846	Tarbp1	89	76.959	ENSSARG00000012207	TARBP1	89	76.959	Sorex_araneus
MGP_SPRETEiJ_G0032846	Tarbp1	99	59.264	ENSSPUG00000015364	TARBP1	99	59.340	Sphenodon_punctatus
MGP_SPRETEiJ_G0032846	Tarbp1	95	42.674	ENSSPAG00000007213	si:dkey-85a20.4	94	42.674	Stegastes_partitus
MGP_SPRETEiJ_G0032846	Tarbp1	98	73.153	ENSSSCG00000010160	TARBP1	99	72.074	Sus_scrofa
MGP_SPRETEiJ_G0032846	Tarbp1	82	62.969	ENSTGUG00000010214	TARBP1	100	62.969	Taeniopygia_guttata
MGP_SPRETEiJ_G0032846	Tarbp1	92	40.470	ENSTNIG00000016586	si:dkey-85a20.4	99	43.881	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0032846	Tarbp1	92	70.481	ENSTTRG00000008707	TARBP1	96	70.481	Tursiops_truncatus
MGP_SPRETEiJ_G0032846	Tarbp1	84	75.546	ENSUMAG00000006730	TARBP1	99	75.546	Ursus_maritimus
MGP_SPRETEiJ_G0032846	Tarbp1	72	89.362	ENSVPAG00000007665	TARBP1	80	89.362	Vicugna_pacos
MGP_SPRETEiJ_G0032846	Tarbp1	89	73.155	ENSVVUG00000007460	TARBP1	100	73.145	Vulpes_vulpes
MGP_SPRETEiJ_G0032846	Tarbp1	86	52.505	ENSXETG00000016224	tarbp1	99	52.505	Xenopus_tropicalis
MGP_SPRETEiJ_G0032846	Tarbp1	80	47.832	ENSXCOG00000011779	si:dkey-85a20.4	94	47.967	Xiphophorus_couchianus
MGP_SPRETEiJ_G0032846	Tarbp1	66	42.347	ENSXMAG00000009600	si:dkey-85a20.4	100	42.441	Xiphophorus_maculatus