EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0032984 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 19455 bases
Position: chr9:18284935-18304389
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0090476	RRM_1	PF00076.22	4.6e-28	1	2
MGP_SPRETEiJ_P0090476	RRM_1	PF00076.22	4.6e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0090476	-	3442	-	MGP_SPRETEiJ_P0090476	748 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0032984's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0032984's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0032984	-	66	45.341	MGP_SPRETEiJ_G0027171	Raver2	76	54.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0032984	-	100	87.834	ENSG00000161847	RAVER1	100	87.299	Homo_sapiens
MGP_SPRETEiJ_G0032984	-	100	87.299	ENSAMEG00000011738	RAVER1	98	87.166	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0032984	-	78	62.338	ENSAPEG00000010854	raver1	83	62.338	Amphiprion_percula
MGP_SPRETEiJ_G0032984	-	97	49.866	ENSATEG00000021004	raver1	91	48.913	Anabas_testudineus
MGP_SPRETEiJ_G0032984	-	84	58.384	ENSACAG00000008386	-	91	59.159	Anolis_carolinensis
MGP_SPRETEiJ_G0032984	-	100	87.166	ENSANAG00000028226	RAVER1	98	87.166	Aotus_nancymaae
MGP_SPRETEiJ_G0032984	-	74	87.500	ENSACLG00000018492	raver1	76	87.500	Astatotilapia_calliptera
MGP_SPRETEiJ_G0032984	-	77	80.000	ENSAMXG00000005132	raver1	81	75.000	Astyanax_mexicanus
MGP_SPRETEiJ_G0032984	-	100	86.631	ENSBTAG00000015721	RAVER1	97	93.506	Bos_taurus
MGP_SPRETEiJ_G0032984	-	100	87.299	ENSCJAG00000005671	RAVER1	98	87.299	Callithrix_jacchus
MGP_SPRETEiJ_G0032984	-	100	86.631	ENSCAFG00000017861	RAVER1	98	86.898	Canis_familiaris
MGP_SPRETEiJ_G0032984	-	100	86.631	ENSCAFG00020024449	RAVER1	100	86.898	Canis_lupus_dingo
MGP_SPRETEiJ_G0032984	-	100	86.230	ENSCHIG00000006718	RAVER1	100	86.364	Capra_hircus
MGP_SPRETEiJ_G0032984	-	91	82.602	ENSTSYG00000027107	RAVER1	100	82.164	Carlito_syrichta
MGP_SPRETEiJ_G0032984	-	90	86.222	ENSCAPG00000002269	RAVER1	100	86.667	Cavia_aperea
MGP_SPRETEiJ_G0032984	-	100	88.102	ENSCPOG00000001008	RAVER1	100	88.636	Cavia_porcellus
MGP_SPRETEiJ_G0032984	-	100	87.567	ENSCCAG00000031723	RAVER1	98	86.898	Cebus_capucinus
MGP_SPRETEiJ_G0032984	-	100	88.503	ENSCATG00000043863	RAVER1	98	87.968	Cercocebus_atys
MGP_SPRETEiJ_G0032984	-	100	89.186	ENSCLAG00000009336	RAVER1	100	88.652	Chinchilla_lanigera
MGP_SPRETEiJ_G0032984	-	100	88.636	ENSCSAG00000007317	RAVER1	84	88.102	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0032984	-	96	61.746	ENSCPBG00000005349	-	96	60.411	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0032984	-	100	88.770	ENSCANG00000008337	RAVER1	98	88.235	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0032984	-	100	96.257	ENSCGRG00001013260	-	100	96.257	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0032984	-	100	96.257	ENSCGRG00000015138	-	100	96.257	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0032984	-	72	80.769	ENSCSEG00000021092	raver1	76	80.769	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0032984	-	98	49.666	ENSCVAG00000013971	raver1	81	61.616	Cyprinodon_variegatus
MGP_SPRETEiJ_G0032984	-	100	80.654	ENSDORG00000010106	-	100	79.608	Dipodomys_ordii
MGP_SPRETEiJ_G0032984	-	67	73.171	ENSETEG00000008201	-	74	87.437	Echinops_telfairi
MGP_SPRETEiJ_G0032984	-	67	90.476	ENSEASG00005010544	-	90	87.955	Equus_asinus_asinus
MGP_SPRETEiJ_G0032984	-	100	89.840	ENSECAG00000024966	RAVER1	98	89.840	Equus_caballus
MGP_SPRETEiJ_G0032984	-	98	50.736	ENSELUG00000023287	raver1	92	51.289	Esox_lucius
MGP_SPRETEiJ_G0032984	-	100	88.904	ENSFCAG00000009435	RAVER1	98	88.904	Felis_catus
MGP_SPRETEiJ_G0032984	-	100	87.984	ENSFDAG00000015113	RAVER1	100	87.850	Fukomys_damarensis
MGP_SPRETEiJ_G0032984	-	81	60.825	ENSGMOG00000003649	raver1	81	60.825	Gadus_morhua
MGP_SPRETEiJ_G0032984	-	66	44.356	ENSGALG00000050608	-	52	43.936	Gallus_gallus
MGP_SPRETEiJ_G0032984	-	96	61.987	ENSGAGG00000011748	-	95	76.685	Gopherus_agassizii
MGP_SPRETEiJ_G0032984	-	100	87.567	ENSGGOG00000006015	RAVER1	98	87.032	Gorilla_gorilla
MGP_SPRETEiJ_G0032984	-	74	84.314	ENSHBUG00000021210	raver1	76	84.314	Haplochromis_burtoni
MGP_SPRETEiJ_G0032984	-	100	88.251	ENSHGLG00000015460	RAVER1	100	87.717	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0032984	-	100	88.251	ENSHGLG00100000812	RAVER1	100	87.717	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0032984	-	98	49.798	ENSHCOG00000000449	raver1	89	49.521	Hippocampus_comes
MGP_SPRETEiJ_G0032984	-	80	60.784	ENSIPUG00000013153	raver1	81	60.784	Ictalurus_punctatus
MGP_SPRETEiJ_G0032984	-	100	89.572	ENSSTOG00000003241	RAVER1	100	89.037	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0032984	-	100	90.254	ENSJJAG00000018219	-	100	90.120	Jaculus_jaculus
MGP_SPRETEiJ_G0032984	-	97	49.800	ENSKMAG00000017355	raver1	91	47.638	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0032984	-	89	48.911	ENSLBEG00000008268	raver1	68	56.213	Labrus_bergylta
MGP_SPRETEiJ_G0032984	-	90	59.858	ENSLACG00000005809	-	99	60.198	Latimeria_chalumnae
MGP_SPRETEiJ_G0032984	-	96	55.836	ENSLOCG00000007500	raver1	92	54.437	Lepisosteus_oculatus
MGP_SPRETEiJ_G0032984	-	100	87.984	ENSLAFG00000003664	-	100	88.251	Loxodonta_africana
MGP_SPRETEiJ_G0032984	-	100	88.102	ENSMFAG00000037977	RAVER1	98	87.567	Macaca_fascicularis
MGP_SPRETEiJ_G0032984	-	100	88.369	ENSMMUG00000014897	RAVER1	98	87.834	Macaca_mulatta
MGP_SPRETEiJ_G0032984	-	100	88.369	ENSMNEG00000028390	RAVER1	98	87.834	Macaca_nemestrina
MGP_SPRETEiJ_G0032984	-	100	88.369	ENSMLEG00000041959	RAVER1	98	87.834	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0032984	-	75	79.245	ENSMAMG00000012059	raver1	57	79.245	Mastacembelus_armatus
MGP_SPRETEiJ_G0032984	-	74	87.500	ENSMZEG00005019002	raver1	76	87.500	Maylandia_zebra
MGP_SPRETEiJ_G0032984	-	100	95.053	ENSMAUG00000017948	-	100	94.920	Mesocricetus_auratus
MGP_SPRETEiJ_G0032984	-	99	86.345	ENSMICG00000010326	RAVER1	99	86.212	Microcebus_murinus
MGP_SPRETEiJ_G0032984	-	100	95.588	ENSMOCG00000015553	-	100	95.588	Microtus_ochrogaster
MGP_SPRETEiJ_G0032984	-	99	50.067	ENSMMOG00000012093	raver1	79	59.000	Mola_mola
MGP_SPRETEiJ_G0032984	-	97	73.973	ENSMODG00000005584	-	89	73.562	Monodelphis_domestica
MGP_SPRETEiJ_G0032984	-	100	99.064	MGP_CAROLIEiJ_G0031860	-	100	99.064	Mus_caroli
MGP_SPRETEiJ_G0032984	-	100	99.866	ENSMUSG00000010205	Raver1	100	99.866	Mus_musculus
MGP_SPRETEiJ_G0032984	-	100	97.473	MGP_PahariEiJ_G0014726	-	100	97.473	Mus_pahari
MGP_SPRETEiJ_G0032984	-	100	88.636	ENSMPUG00000006712	RAVER1	98	88.503	Mustela_putorius_furo
MGP_SPRETEiJ_G0032984	-	100	85.561	ENSMLUG00000012328	RAVER1	100	85.963	Myotis_lucifugus
MGP_SPRETEiJ_G0032984	-	100	90.387	ENSNGAG00000001260	-	100	90.387	Nannospalax_galili
MGP_SPRETEiJ_G0032984	-	68	47.665	ENSNBRG00000010139	raver1	65	49.304	Neolamprologus_brichardi
MGP_SPRETEiJ_G0032984	-	100	87.968	ENSNLEG00000012181	RAVER1	98	87.433	Nomascus_leucogenys
MGP_SPRETEiJ_G0032984	-	90	73.314	ENSMEUG00000003281	-	100	71.994	Notamacropus_eugenii
MGP_SPRETEiJ_G0032984	-	50	85.156	ENSOPRG00000005855	-	51	85.156	Ochotona_princeps
MGP_SPRETEiJ_G0032984	-	100	88.518	ENSODEG00000016260	RAVER1	100	87.984	Octodon_degus
MGP_SPRETEiJ_G0032984	-	78	63.750	ENSONIG00000001559	raver1	99	50.475	Oreochromis_niloticus
MGP_SPRETEiJ_G0032984	-	100	81.684	ENSOCUG00000020918	RAVER1	98	82.219	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0032984	-	70	61.379	ENSORLG00000005458	raver1	67	64.428	Oryzias_latipes
MGP_SPRETEiJ_G0032984	-	70	61.149	ENSORLG00020004392	raver1	67	64.179	Oryzias_latipes_hni
MGP_SPRETEiJ_G0032984	-	70	60.920	ENSORLG00015017222	raver1	67	63.930	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0032984	-	75	83.673	ENSOMEG00000023956	raver1	67	83.673	Oryzias_melastigma
MGP_SPRETEiJ_G0032984	-	100	87.032	ENSOGAG00000011071	RAVER1	98	86.631	Otolemur_garnettii
MGP_SPRETEiJ_G0032984	-	100	84.626	ENSOARG00000015886	RAVER1	98	84.626	Ovis_aries
MGP_SPRETEiJ_G0032984	-	100	87.834	ENSPPAG00000002611	RAVER1	98	87.299	Pan_paniscus
MGP_SPRETEiJ_G0032984	-	100	89.305	ENSPPRG00000009912	RAVER1	98	89.305	Panthera_pardus
MGP_SPRETEiJ_G0032984	-	100	87.834	ENSPTRG00000010466	RAVER1	98	87.299	Pan_troglodytes
MGP_SPRETEiJ_G0032984	-	100	88.369	ENSPANG00000004122	RAVER1	98	87.834	Papio_anubis
MGP_SPRETEiJ_G0032984	-	100	95.861	ENSPEMG00000016411	-	100	95.861	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0032984	-	100	75.629	ENSPCIG00000018695	-	99	79.605	Phascolarctos_cinereus
MGP_SPRETEiJ_G0032984	-	63	66.578	ENSPLAG00000020793	raver1	79	56.093	Poecilia_latipinna
MGP_SPRETEiJ_G0032984	-	99	51.333	ENSPMEG00000011220	raver1	91	50.068	Poecilia_mexicana
MGP_SPRETEiJ_G0032984	-	74	90.698	ENSPREG00000006864	raver1	77	90.698	Poecilia_reticulata
MGP_SPRETEiJ_G0032984	-	100	87.166	ENSPPYG00000010514	RAVER1	84	86.765	Pongo_abelii
MGP_SPRETEiJ_G0032984	-	100	88.000	ENSPCOG00000026605	RAVER1	98	88.133	Propithecus_coquereli
MGP_SPRETEiJ_G0032984	-	100	87.567	ENSPVAG00000003689	RAVER1	100	87.701	Pteropus_vampyrus
MGP_SPRETEiJ_G0032984	-	64	84.314	ENSPNYG00000013284	raver1	65	84.314	Pundamilia_nyererei
MGP_SPRETEiJ_G0032984	-	98	51.200	ENSPNAG00000015476	raver1	91	51.084	Pygocentrus_nattereri
MGP_SPRETEiJ_G0032984	-	100	96.524	ENSRNOG00000020710	Raver1	100	96.524	Rattus_norvegicus
MGP_SPRETEiJ_G0032984	-	100	87.701	ENSRBIG00000034702	RAVER1	98	87.834	Rhinopithecus_bieti
MGP_SPRETEiJ_G0032984	-	100	86.096	ENSRROG00000031186	RAVER1	98	85.428	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0032984	-	100	85.027	ENSSBOG00000023423	RAVER1	98	84.225	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0032984	-	90	73.939	ENSSHAG00000008181	-	90	73.206	Sarcophilus_harrisii
MGP_SPRETEiJ_G0032984	-	98	50.528	ENSSDUG00000021063	raver1	84	55.303	Seriola_dumerili
MGP_SPRETEiJ_G0032984	-	68	57.471	ENSSLDG00000014505	raver1	66	56.385	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0032984	-	79	61.905	ENSSPAG00000000688	raver1	82	57.658	Stegastes_partitus
MGP_SPRETEiJ_G0032984	-	100	89.171	ENSSSCG00000013650	-	98	89.305	Sus_scrofa
MGP_SPRETEiJ_G0032984	-	97	50.135	ENSTRUG00000025641	raver1	78	59.000	Takifugu_rubripes
MGP_SPRETEiJ_G0032984	-	100	87.701	ENSTTRG00000009552	RAVER1	100	88.102	Tursiops_truncatus
MGP_SPRETEiJ_G0032984	-	100	89.037	ENSUAMG00000020385	RAVER1	98	88.904	Ursus_americanus
MGP_SPRETEiJ_G0032984	-	100	86.631	ENSVVUG00000028976	RAVER1	98	86.898	Vulpes_vulpes
MGP_SPRETEiJ_G0032984	-	98	55.962	ENSXETG00000011622	raver1	95	55.540	Xenopus_tropicalis
MGP_SPRETEiJ_G0032984	-	99	50.531	ENSXCOG00000016368	raver1	77	60.606	Xiphophorus_couchianus
MGP_SPRETEiJ_G0032984	-	99	50.265	ENSXMAG00000000217	raver1	78	60.606	Xiphophorus_maculatus