EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0033017 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 27458 bases
Position: chr9:19295134-19322591
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0090569	RRM_1	PF00076.22	1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0090569	-	4582	-	MGP_SPRETEiJ_P0090569	227 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0033017's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0033017's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0033017	-	51	67.480	MGP_SPRETEiJ_G0027124	Elavl2	92	70.435
MGP_SPRETEiJ_G0033017	-	50	68.293	MGP_SPRETEiJ_G0027258	Elavl4	99	68.085

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0033017	-	51	97.391	ENSG00000196361	ELAVL3	100	84.404	Homo_sapiens
MGP_SPRETEiJ_G0033017	-	51	82.609	ENSAOCG00000005054	elavl3	52	82.609	Amphiprion_ocellaris
MGP_SPRETEiJ_G0033017	-	51	82.609	ENSAPEG00000011145	elavl3	52	82.609	Amphiprion_percula
MGP_SPRETEiJ_G0033017	-	51	96.522	ENSANAG00000030798	ELAVL3	50	96.522	Aotus_nancymaae
MGP_SPRETEiJ_G0033017	-	50	80.702	ENSACLG00000018260	elavl3	52	80.702	Astatotilapia_calliptera
MGP_SPRETEiJ_G0033017	-	51	82.609	ENSAMXG00000040498	elavl3	51	82.727	Astyanax_mexicanus
MGP_SPRETEiJ_G0033017	-	51	96.522	ENSBTAG00000014412	ELAVL3	50	96.522	Bos_taurus
MGP_SPRETEiJ_G0033017	-	50	95.575	ENSCAFG00020004614	ELAVL3	50	96.429	Canis_lupus_dingo
MGP_SPRETEiJ_G0033017	-	51	97.391	ENSCCAG00000034350	ELAVL3	50	96.552	Cebus_capucinus
MGP_SPRETEiJ_G0033017	-	51	81.034	ENSCPBG00000023982	ELAVL3	50	81.034	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0033017	-	51	80.870	ENSCSEG00000021095	elavl3	52	80.870	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0033017	-	51	82.609	ENSCVAG00000014060	elavl3	52	81.739	Cyprinodon_variegatus
MGP_SPRETEiJ_G0033017	-	51	83.478	ENSDARG00000014420	elavl3	59	89.744	Danio_rerio
MGP_SPRETEiJ_G0033017	-	51	93.913	ENSDORG00000002538	Elavl3	50	93.913	Dipodomys_ordii
MGP_SPRETEiJ_G0033017	-	51	95.652	ENSECAG00000020594	ELAVL3	72	95.652	Equus_caballus
MGP_SPRETEiJ_G0033017	-	51	83.478	ENSELUG00000023043	elavl3	51	83.478	Esox_lucius
MGP_SPRETEiJ_G0033017	-	51	97.391	ENSFDAG00000008449	ELAVL3	56	97.391	Fukomys_damarensis
MGP_SPRETEiJ_G0033017	-	51	81.739	ENSFHEG00000001675	elavl3	52	81.739	Fundulus_heteroclitus
MGP_SPRETEiJ_G0033017	-	51	83.478	ENSGMOG00000003760	elavl3	50	83.478	Gadus_morhua
MGP_SPRETEiJ_G0033017	-	51	82.609	ENSGACG00000013839	elavl3	50	83.036	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0033017	-	51	82.609	ENSHBUG00000020978	elavl3	51	82.609	Haplochromis_burtoni
MGP_SPRETEiJ_G0033017	-	51	97.391	ENSHGLG00100011200	ELAVL3	52	97.391	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0033017	-	51	83.478	ENSHCOG00000015894	elavl3	51	83.478	Hippocampus_comes
MGP_SPRETEiJ_G0033017	-	51	82.609	ENSKMAG00000017412	elavl3	51	83.036	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0033017	-	51	82.609	ENSLBEG00000008073	elavl3	51	83.036	Labrus_bergylta
MGP_SPRETEiJ_G0033017	-	51	97.391	ENSMFAG00000003692	ELAVL3	50	95.652	Macaca_fascicularis
MGP_SPRETEiJ_G0033017	-	51	97.391	ENSMNEG00000043973	ELAVL3	50	95.652	Macaca_nemestrina
MGP_SPRETEiJ_G0033017	-	51	82.609	ENSMZEG00005019053	elavl3	52	82.609	Maylandia_zebra
MGP_SPRETEiJ_G0033017	-	51	80.870	ENSMMOG00000012154	elavl3	52	80.870	Mola_mola
MGP_SPRETEiJ_G0033017	-	51	97.391	ENSMUSG00000003410	Elavl3	72	96.522	Mus_musculus
MGP_SPRETEiJ_G0033017	-	51	82.609	ENSNBRG00000010319	elavl3	50	82.609	Neolamprologus_brichardi
MGP_SPRETEiJ_G0033017	-	51	81.739	ENSORLG00000005379	elavl3	50	81.739	Oryzias_latipes
MGP_SPRETEiJ_G0033017	-	51	82.609	ENSORLG00020004570	elavl3	52	82.609	Oryzias_latipes_hni
MGP_SPRETEiJ_G0033017	-	51	82.609	ENSOMEG00000023959	elavl3	52	81.739	Oryzias_melastigma
MGP_SPRETEiJ_G0033017	-	51	97.391	ENSPANG00000005849	ELAVL3	50	95.652	Papio_anubis
MGP_SPRETEiJ_G0033017	-	51	82.609	ENSPKIG00000016207	elavl3	52	82.609	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0033017	-	51	82.609	ENSPMGG00000002016	elavl3	52	82.609	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0033017	-	51	82.609	ENSPREG00000006971	elavl3	52	81.739	Poecilia_reticulata
MGP_SPRETEiJ_G0033017	-	50	80.702	ENSPNYG00000013186	elavl3	51	80.702	Pundamilia_nyererei
MGP_SPRETEiJ_G0033017	-	51	82.609	ENSPNAG00000003633	elavl3	52	80.702	Pygocentrus_nattereri
MGP_SPRETEiJ_G0033017	-	51	82.609	ENSSFOG00015023630	elavl3	53	85.047	Scleropages_formosus
MGP_SPRETEiJ_G0033017	-	51	81.739	ENSSMAG00000004671	elavl3	51	81.982	Scophthalmus_maximus
MGP_SPRETEiJ_G0033017	-	51	82.609	ENSSLDG00000013769	elavl3	51	83.036	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0033017	-	51	94.783	ENSUAMG00000000405	ELAVL3	50	96.429	Ursus_americanus
MGP_SPRETEiJ_G0033017	-	50	94.737	ENSUMAG00000019546	ELAVL3	52	94.737	Ursus_maritimus
MGP_SPRETEiJ_G0033017	-	51	96.522	ENSVVUG00000023733	ELAVL3	50	96.522	Vulpes_vulpes
MGP_SPRETEiJ_G0033017	-	51	81.739	ENSXMAG00000018287	elavl3	52	81.739	Xiphophorus_maculatus