EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0033061 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 111833 bases
Position: chr9:28919634-29031466
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0090692	zf-C2H2	PF00096.26	9.4e-27	1	4
MGP_SPRETEiJ_P0090692	zf-C2H2	PF00096.26	9.4e-27	2	4
MGP_SPRETEiJ_P0090692	zf-C2H2	PF00096.26	9.4e-27	3	4
MGP_SPRETEiJ_P0090692	zf-C2H2	PF00096.26	9.4e-27	4	4
MGP_SPRETEiJ_P0090692	zf-met	PF12874.7	9.6e-09	1	2
MGP_SPRETEiJ_P0090692	zf-met	PF12874.7	9.6e-09	2	2
MGP_SPRETEiJ_P0090692	zf-C2H2_jaz	PF12171.8	1.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0090691	-	2995	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0090690	-	6666	-	MGP_SPRETEiJ_P0090690	1150 (aa)	-	-
MGP_SPRETEiJ_T0090689	-	1949	-	MGP_SPRETEiJ_P0090689	341 (aa)	-	UPI000022833A
MGP_SPRETEiJ_T0090692	-	3408	-	MGP_SPRETEiJ_P0090692	1135 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0033061's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0033061's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0033061	-	100	92.599	ENSG00000170325	PRDM10	99	94.240	Homo_sapiens
MGP_SPRETEiJ_G0033061	-	96	96.053	ENSAMEG00000002425	PRDM10	100	88.426	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0033061	-	100	83.763	ENSAPLG00000004858	PRDM10	100	83.763	Anas_platyrhynchos
MGP_SPRETEiJ_G0033061	-	100	84.575	ENSANAG00000022064	PRDM10	100	78.112	Aotus_nancymaae
MGP_SPRETEiJ_G0033061	-	100	91.544	ENSBTAG00000019001	PRDM10	100	91.866	Bos_taurus
MGP_SPRETEiJ_G0033061	-	100	92.765	ENSCJAG00000009235	PRDM10	100	92.765	Callithrix_jacchus
MGP_SPRETEiJ_G0033061	-	100	92.007	ENSCAFG00000010164	PRDM10	100	92.007	Canis_familiaris
MGP_SPRETEiJ_G0033061	-	100	90.870	ENSCAFG00020010152	PRDM10	96	98.667	Canis_lupus_dingo
MGP_SPRETEiJ_G0033061	-	100	91.631	ENSCHIG00000026530	PRDM10	100	91.192	Capra_hircus
MGP_SPRETEiJ_G0033061	-	100	93.546	ENSTSYG00000000544	PRDM10	100	93.632	Carlito_syrichta
MGP_SPRETEiJ_G0033061	-	100	85.309	ENSCAPG00000017296	PRDM10	100	85.481	Cavia_aperea
MGP_SPRETEiJ_G0033061	-	98	85.344	ENSCPOG00000000389	PRDM10	98	86.436	Cavia_porcellus
MGP_SPRETEiJ_G0033061	-	100	92.679	ENSCCAG00000024567	PRDM10	100	92.937	Cebus_capucinus
MGP_SPRETEiJ_G0033061	-	100	92.672	ENSCATG00000040031	PRDM10	100	92.931	Cercocebus_atys
MGP_SPRETEiJ_G0033061	-	100	91.073	ENSCLAG00000014605	PRDM10	100	91.588	Chinchilla_lanigera
MGP_SPRETEiJ_G0033061	-	100	92.845	ENSCSAG00000002202	PRDM10	100	93.190	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0033061	-	98	83.659	ENSCPBG00000026880	PRDM10	99	81.146	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0033061	-	100	92.937	ENSCANG00000032669	PRDM10	100	93.196	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0033061	-	100	96.872	ENSCGRG00001021647	Prdm10	98	96.872	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0033061	-	100	96.872	ENSCGRG00000006562	Prdm10	98	96.872	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0033061	-	82	91.824	ENSDNOG00000001366	PRDM10	95	91.824	Dasypus_novemcinctus
MGP_SPRETEiJ_G0033061	-	100	93.831	ENSDORG00000014292	Prdm10	100	93.745	Dipodomys_ordii
MGP_SPRETEiJ_G0033061	-	96	98.529	ENSEASG00005022914	PRDM10	100	92.235	Equus_asinus_asinus
MGP_SPRETEiJ_G0033061	-	96	98.529	ENSECAG00000011499	PRDM10	100	92.148	Equus_caballus
MGP_SPRETEiJ_G0033061	-	98	92.084	ENSFCAG00000004111	PRDM10	96	92.084	Felis_catus
MGP_SPRETEiJ_G0033061	-	98	83.906	ENSFALG00000004873	PRDM10	100	80.449	Ficedula_albicollis
MGP_SPRETEiJ_G0033061	-	96	96.104	ENSFDAG00000017311	PRDM10	100	91.426	Fukomys_damarensis
MGP_SPRETEiJ_G0033061	-	98	84.051	ENSGALG00000033660	PRDM10	99	83.914	Gallus_gallus
MGP_SPRETEiJ_G0033061	-	98	65.221	ENSGACG00000012293	prdm10	99	67.949	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0033061	-	100	82.918	ENSGAGG00000012523	PRDM10	99	82.918	Gopherus_agassizii
MGP_SPRETEiJ_G0033061	-	100	93.414	ENSGGOG00000015359	PRDM10	100	93.333	Gorilla_gorilla
MGP_SPRETEiJ_G0033061	-	99	92.431	ENSHGLG00000001106	PRDM10	100	91.638	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0033061	-	100	91.709	ENSHGLG00100002350	PRDM10	100	91.795	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0033061	-	100	93.540	ENSSTOG00000002015	PRDM10	100	93.798	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0033061	-	82	92.850	ENSJJAG00000021493	Prdm10	90	92.165	Jaculus_jaculus
MGP_SPRETEiJ_G0033061	-	100	88.584	ENSLAFG00000031867	PRDM10	100	88.412	Loxodonta_africana
MGP_SPRETEiJ_G0033061	-	100	93.103	ENSMFAG00000031008	PRDM10	100	93.362	Macaca_fascicularis
MGP_SPRETEiJ_G0033061	-	100	93.103	ENSMMUG00000017555	PRDM10	100	93.362	Macaca_mulatta
MGP_SPRETEiJ_G0033061	-	100	93.017	ENSMNEG00000036493	PRDM10	100	93.276	Macaca_nemestrina
MGP_SPRETEiJ_G0033061	-	84	100.000	ENSMLEG00000042028	PRDM10	90	100.000	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0033061	-	97	84.004	ENSMGAG00000001112	PRDM10	100	80.683	Meleagris_gallopavo
MGP_SPRETEiJ_G0033061	-	100	93.017	ENSMICG00000013888	PRDM10	100	93.276	Microcebus_murinus
MGP_SPRETEiJ_G0033061	-	100	94.643	ENSMOCG00000021853	Prdm10	100	94.643	Microtus_ochrogaster
MGP_SPRETEiJ_G0033061	-	76	86.765	ENSMODG00000004979	PRDM10	99	87.217	Monodelphis_domestica
MGP_SPRETEiJ_G0033061	-	100	99.383	ENSMUSG00000042496	Prdm10	100	99.383	Mus_musculus
MGP_SPRETEiJ_G0033061	-	100	91.890	ENSMPUG00000008711	PRDM10	99	91.890	Mustela_putorius_furo
MGP_SPRETEiJ_G0033061	-	100	91.623	ENSMLUG00000013051	PRDM10	100	91.364	Myotis_lucifugus
MGP_SPRETEiJ_G0033061	-	100	94.870	ENSNGAG00000000580	Prdm10	100	94.783	Nannospalax_galili
MGP_SPRETEiJ_G0033061	-	100	93.190	ENSNLEG00000007488	PRDM10	100	93.448	Nomascus_leucogenys
MGP_SPRETEiJ_G0033061	-	100	90.545	ENSODEG00000005309	PRDM10	100	90.545	Octodon_degus
MGP_SPRETEiJ_G0033061	-	100	77.929	ENSOANG00000000577	-	100	77.250	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0033061	-	100	91.623	ENSOCUG00000003736	PRDM10	100	91.623	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0033061	-	100	92.328	ENSOGAG00000010723	PRDM10	100	92.328	Otolemur_garnettii
MGP_SPRETEiJ_G0033061	-	100	91.544	ENSOARG00000014507	PRDM10	100	91.105	Ovis_aries
MGP_SPRETEiJ_G0033061	-	100	93.328	ENSPPAG00000042881	PRDM10	100	93.247	Pan_paniscus
MGP_SPRETEiJ_G0033061	-	100	91.890	ENSPPRG00000007002	PRDM10	100	91.890	Panthera_pardus
MGP_SPRETEiJ_G0033061	-	100	91.803	ENSPTIG00000013331	PRDM10	100	91.803	Panthera_tigris_altaica
MGP_SPRETEiJ_G0033061	-	100	93.501	ENSPTRG00000004477	PRDM10	100	93.420	Pan_troglodytes
MGP_SPRETEiJ_G0033061	-	100	93.103	ENSPANG00000017470	PRDM10	100	93.362	Papio_anubis
MGP_SPRETEiJ_G0033061	-	100	95.730	ENSPEMG00000014985	Prdm10	100	95.730	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0033061	-	100	92.599	ENSPPYG00000004061	PRDM10	100	92.685	Pongo_abelii
MGP_SPRETEiJ_G0033061	-	88	94.545	ENSPCAG00000014514	PRDM10	92	94.545	Procavia_capensis
MGP_SPRETEiJ_G0033061	-	100	78.988	ENSPCOG00000023406	PRDM10	100	80.052	Propithecus_coquereli
MGP_SPRETEiJ_G0033061	-	100	92.580	ENSPVAG00000012764	PRDM10	100	92.235	Pteropus_vampyrus
MGP_SPRETEiJ_G0033061	-	100	98.522	ENSRNOG00000007853	Prdm10	100	98.522	Rattus_norvegicus
MGP_SPRETEiJ_G0033061	-	100	92.943	ENSRBIG00000030924	PRDM10	100	93.029	Rhinopithecus_bieti
MGP_SPRETEiJ_G0033061	-	100	92.943	ENSRROG00000034334	PRDM10	100	93.029	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0033061	-	100	92.771	ENSSBOG00000008773	PRDM10	100	92.857	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0033061	-	99	85.090	ENSSHAG00000004503	PRDM10	99	85.518	Sarcophilus_harrisii
MGP_SPRETEiJ_G0033061	-	68	100.000	ENSSARG00000013953	-	68	100.000	Sorex_araneus
MGP_SPRETEiJ_G0033061	-	100	80.640	ENSSPUG00000001178	PRDM10	97	83.868	Sphenodon_punctatus
MGP_SPRETEiJ_G0033061	-	96	96.154	ENSSSCG00000015243	PRDM10	100	91.544	Sus_scrofa
MGP_SPRETEiJ_G0033061	-	100	83.119	ENSTGUG00000000530	PRDM10	100	83.119	Taeniopygia_guttata
MGP_SPRETEiJ_G0033061	-	100	80.620	ENSTBEG00000007221	PRDM10	94	90.308	Tupaia_belangeri
MGP_SPRETEiJ_G0033061	-	100	90.069	ENSTTRG00000009189	PRDM10	100	89.560	Tursiops_truncatus
MGP_SPRETEiJ_G0033061	-	91	91.635	ENSUAMG00000018832	PRDM10	92	96.104	Ursus_americanus
MGP_SPRETEiJ_G0033061	-	100	89.915	ENSUMAG00000003167	PRDM10	97	94.805	Ursus_maritimus
MGP_SPRETEiJ_G0033061	-	100	91.803	ENSVVUG00000019878	PRDM10	100	91.803	Vulpes_vulpes
MGP_SPRETEiJ_G0033061	-	98	70.980	ENSXETG00000032173	PRDM10	90	70.882	Xenopus_tropicalis