EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0033063 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 3195 bases
Position: chr9:29040266-29043460
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0090698	Nup35_RRM	PF05172.13	2.2e-39	1	2
MGP_SPRETEiJ_P0090698	Nup35_RRM	PF05172.13	2.2e-39	2	2
MGP_SPRETEiJ_P0090698	Nup35_RRM_2	PF14605.6	2.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0090698	-	1599	-	MGP_SPRETEiJ_P0090698	299 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0033063's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0033063's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0033063	-	100	81.000	ENSG00000163002	NUP35	86	81.000	Homo_sapiens
MGP_SPRETEiJ_G0033063	-	97	52.055	ENSAPOG00000003630	nup35	79	52.055	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0033063	-	100	80.198	ENSAMEG00000001191	NUP35	81	80.198	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0033063	-	98	51.701	ENSACIG00000023984	nup35	98	51.701	Amphilophus_citrinellus
MGP_SPRETEiJ_G0033063	-	97	52.055	ENSAOCG00000007484	nup35	79	52.055	Amphiprion_ocellaris
MGP_SPRETEiJ_G0033063	-	97	52.055	ENSAPEG00000020027	nup35	79	52.901	Amphiprion_percula
MGP_SPRETEiJ_G0033063	-	96	51.724	ENSATEG00000019305	nup35	79	51.877	Anabas_testudineus
MGP_SPRETEiJ_G0033063	-	100	73.422	ENSAPLG00000009161	NUP35	82	73.422	Anas_platyrhynchos
MGP_SPRETEiJ_G0033063	-	100	69.767	ENSACAG00000008692	NUP35	81	69.767	Anolis_carolinensis
MGP_SPRETEiJ_G0033063	-	100	79.333	ENSANAG00000021090	NUP35	81	79.333	Aotus_nancymaae
MGP_SPRETEiJ_G0033063	-	95	50.871	ENSACLG00000013918	nup35	78	50.853	Astatotilapia_calliptera
MGP_SPRETEiJ_G0033063	-	99	64.548	ENSAMXG00000003371	nup35	86	64.548	Astyanax_mexicanus
MGP_SPRETEiJ_G0033063	-	100	81.395	ENSBTAG00000009777	NUP35	81	81.395	Bos_taurus
MGP_SPRETEiJ_G0033063	-	100	80.333	ENSCJAG00000011104	NUP35	81	80.333	Callithrix_jacchus
MGP_SPRETEiJ_G0033063	-	100	80.198	ENSCAFG00000031849	NUP35	86	80.198	Canis_familiaris
MGP_SPRETEiJ_G0033063	-	100	80.198	ENSCAFG00020008408	NUP35	81	80.198	Canis_lupus_dingo
MGP_SPRETEiJ_G0033063	-	100	81.728	ENSCHIG00000023148	NUP35	86	81.728	Capra_hircus
MGP_SPRETEiJ_G0033063	-	100	79.264	ENSTSYG00000002117	NUP35	81	79.264	Carlito_syrichta
MGP_SPRETEiJ_G0033063	-	100	64.026	ENSCAPG00000005703	NUP35	82	64.686	Cavia_aperea
MGP_SPRETEiJ_G0033063	-	100	79.734	ENSCPOG00000011906	NUP35	83	80.399	Cavia_porcellus
MGP_SPRETEiJ_G0033063	-	100	80.333	ENSCCAG00000025009	NUP35	99	75.862	Cebus_capucinus
MGP_SPRETEiJ_G0033063	-	100	65.667	ENSCATG00000033109	NUP35	78	65.667	Cercocebus_atys
MGP_SPRETEiJ_G0033063	-	100	79.070	ENSCLAG00000012559	NUP35	81	79.402	Chinchilla_lanigera
MGP_SPRETEiJ_G0033063	-	100	80.667	ENSCSAG00000012620	NUP35	81	80.667	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0033063	-	100	73.754	ENSCPBG00000001303	NUP35	82	73.754	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0033063	-	96	39.116	ENSCING00000009659	-	79	39.116	Ciona_intestinalis
MGP_SPRETEiJ_G0033063	-	93	42.308	ENSCSAVG00000007467	-	73	42.456	Ciona_savignyi
MGP_SPRETEiJ_G0033063	-	100	80.667	ENSCANG00000030785	NUP35	98	77.922	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0033063	-	100	83.278	ENSCGRG00001018638	-	81	83.278	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0033063	-	100	83.278	ENSCGRG00000011313	-	81	83.278	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0033063	-	97	50.690	ENSCSEG00000000938	nup35	78	50.690	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0033063	-	96	52.083	ENSCVAG00000001792	nup35	79	52.218	Cyprinodon_variegatus
MGP_SPRETEiJ_G0033063	-	99	61.873	ENSDARG00000012222	nup35	86	61.873	Danio_rerio
MGP_SPRETEiJ_G0033063	-	100	79.734	ENSDNOG00000038754	-	81	79.734	Dasypus_novemcinctus
MGP_SPRETEiJ_G0033063	-	100	80.399	ENSDNOG00000009513	-	72	80.399	Dasypus_novemcinctus
MGP_SPRETEiJ_G0033063	-	100	80.333	ENSDORG00000010458	-	82	80.333	Dipodomys_ordii
MGP_SPRETEiJ_G0033063	-	100	79.734	ENSETEG00000005896	NUP35	85	79.734	Echinops_telfairi
MGP_SPRETEiJ_G0033063	-	100	47.115	ENSEBUG00000013034	nup35	84	46.774	Eptatretus_burgeri
MGP_SPRETEiJ_G0033063	-	100	80.731	ENSEASG00005022100	NUP35	81	80.731	Equus_asinus_asinus
MGP_SPRETEiJ_G0033063	-	100	80.399	ENSECAG00000003968	NUP35	86	80.399	Equus_caballus
MGP_SPRETEiJ_G0033063	-	100	70.432	ENSEEUG00000008469	NUP35	81	70.432	Erinaceus_europaeus
MGP_SPRETEiJ_G0033063	-	100	64.784	ENSELUG00000013693	nup35	87	64.784	Esox_lucius
MGP_SPRETEiJ_G0033063	-	100	79.208	ENSFCAG00000025636	NUP35	86	79.208	Felis_catus
MGP_SPRETEiJ_G0033063	-	100	70.530	ENSFALG00000013175	NUP35	82	70.530	Ficedula_albicollis
MGP_SPRETEiJ_G0033063	-	100	80.333	ENSFDAG00000017998	NUP35	81	80.333	Fukomys_damarensis
MGP_SPRETEiJ_G0033063	-	96	51.034	ENSFHEG00000010229	nup35	79	51.877	Fundulus_heteroclitus
MGP_SPRETEiJ_G0033063	-	97	48.276	ENSGMOG00000003337	nup35	100	48.276	Gadus_morhua
MGP_SPRETEiJ_G0033063	-	100	71.096	ENSGALG00000002689	NUP35	82	71.096	Gallus_gallus
MGP_SPRETEiJ_G0033063	-	96	51.049	ENSGAFG00000022048	nup35	78	51.890	Gambusia_affinis
MGP_SPRETEiJ_G0033063	-	97	51.877	ENSGACG00000008203	nup35	79	51.877	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0033063	-	100	73.179	ENSGAGG00000001967	NUP35	86	73.179	Gopherus_agassizii
MGP_SPRETEiJ_G0033063	-	100	81.000	ENSGGOG00000009919	NUP35	97	77.021	Gorilla_gorilla
MGP_SPRETEiJ_G0033063	-	97	66.894	ENSHGLG00000008616	-	77	66.894	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0033063	-	100	80.066	ENSHGLG00000013230	NUP35	81	80.066	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0033063	-	100	61.130	ENSHGLG00000000414	-	80	61.130	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0033063	-	97	66.894	ENSHGLG00100000091	-	78	66.894	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0033063	-	100	80.066	ENSHGLG00100012840	NUP35	81	80.066	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0033063	-	100	61.130	ENSHGLG00100010869	-	80	61.130	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0033063	-	100	49.673	ENSHCOG00000003882	nup35	84	49.673	Hippocampus_comes
MGP_SPRETEiJ_G0033063	-	99	59.197	ENSIPUG00000002798	nup35	83	59.197	Ictalurus_punctatus
MGP_SPRETEiJ_G0033063	-	100	81.605	ENSSTOG00000000711	NUP35	81	81.605	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0033063	-	100	81.333	ENSJJAG00000016432	-	82	81.333	Jaculus_jaculus
MGP_SPRETEiJ_G0033063	-	99	72.483	ENSJJAG00000017434	-	80	72.483	Jaculus_jaculus
MGP_SPRETEiJ_G0033063	-	91	73.260	ENSJJAG00000006387	-	80	73.260	Jaculus_jaculus
MGP_SPRETEiJ_G0033063	-	100	68.000	ENSJJAG00000007003	-	78	68.333	Jaculus_jaculus
MGP_SPRETEiJ_G0033063	-	95	50.694	ENSKMAG00000011162	nup35	78	51.361	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0033063	-	97	38.488	ENSLBEG00000012416	nup35	78	38.488	Labrus_bergylta
MGP_SPRETEiJ_G0033063	-	100	69.103	ENSLACG00000008247	NUP35	86	69.103	Latimeria_chalumnae
MGP_SPRETEiJ_G0033063	-	100	61.130	ENSLOCG00000006726	nup35	83	61.130	Lepisosteus_oculatus
MGP_SPRETEiJ_G0033063	-	100	79.085	ENSLAFG00000008155	NUP35	82	79.085	Loxodonta_africana
MGP_SPRETEiJ_G0033063	-	100	80.333	ENSMFAG00000000834	NUP35	98	69.264	Macaca_fascicularis
MGP_SPRETEiJ_G0033063	-	100	80.667	ENSMMUG00000004140	NUP35	84	80.667	Macaca_mulatta
MGP_SPRETEiJ_G0033063	-	100	80.667	ENSMNEG00000029014	NUP35	81	80.667	Macaca_nemestrina
MGP_SPRETEiJ_G0033063	-	100	80.667	ENSMLEG00000035422	NUP35	98	77.922	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0033063	-	96	51.379	ENSMAMG00000013232	nup35	80	51.536	Mastacembelus_armatus
MGP_SPRETEiJ_G0033063	-	100	49.511	ENSMZEG00005020619	nup35	81	49.511	Maylandia_zebra
MGP_SPRETEiJ_G0033063	-	100	71.096	ENSMGAG00000004412	NUP35	81	71.096	Meleagris_gallopavo
MGP_SPRETEiJ_G0033063	-	100	82.943	ENSMAUG00000013776	-	81	82.943	Mesocricetus_auratus
MGP_SPRETEiJ_G0033063	-	100	81.063	ENSMICG00000006790	NUP35	86	81.728	Microcebus_murinus
MGP_SPRETEiJ_G0033063	-	100	81.940	ENSMOCG00000014754	-	81	81.940	Microtus_ochrogaster
MGP_SPRETEiJ_G0033063	-	97	50.000	ENSMMOG00000005026	nup35	80	50.000	Mola_mola
MGP_SPRETEiJ_G0033063	-	100	75.251	ENSMODG00000010578	NUP35	81	75.251	Monodelphis_domestica
MGP_SPRETEiJ_G0033063	-	97	51.536	ENSMALG00000020187	nup35	80	51.536	Monopterus_albus
MGP_SPRETEiJ_G0033063	-	100	86.288	MGP_CAROLIEiJ_G0023709	-	81	86.288	Mus_caroli
MGP_SPRETEiJ_G0033063	-	100	86.288	ENSMUSG00000026999	Nup35	81	86.288	Mus_musculus
MGP_SPRETEiJ_G0033063	-	100	85.619	MGP_PahariEiJ_G0025160	-	81	85.619	Mus_pahari
MGP_SPRETEiJ_G0033063	-	100	80.198	ENSMPUG00000002063	NUP35	81	80.198	Mustela_putorius_furo
MGP_SPRETEiJ_G0033063	-	100	80.066	ENSMLUG00000013154	NUP35	81	80.066	Myotis_lucifugus
MGP_SPRETEiJ_G0033063	-	100	80.936	ENSNGAG00000012107	-	81	80.936	Nannospalax_galili
MGP_SPRETEiJ_G0033063	-	95	50.523	ENSNBRG00000020466	nup35	79	50.853	Neolamprologus_brichardi
MGP_SPRETEiJ_G0033063	-	100	81.000	ENSNLEG00000035026	NUP35	100	76.446	Nomascus_leucogenys
MGP_SPRETEiJ_G0033063	-	56	82.222	ENSMEUG00000003001	-	52	82.222	Notamacropus_eugenii
MGP_SPRETEiJ_G0033063	-	97	78.694	ENSOPRG00000016609	NUP35	78	78.694	Ochotona_princeps
MGP_SPRETEiJ_G0033063	-	99	60.201	ENSODEG00000000280	-	85	60.201	Octodon_degus
MGP_SPRETEiJ_G0033063	-	100	80.066	ENSODEG00000011202	-	81	80.066	Octodon_degus
MGP_SPRETEiJ_G0033063	-	95	51.220	ENSONIG00000016251	nup35	78	51.195	Oreochromis_niloticus
MGP_SPRETEiJ_G0033063	-	61	84.324	ENSOANG00000006793	-	76	84.324	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0033063	-	100	80.667	ENSOCUG00000014407	NUP35	81	80.667	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0033063	-	97	51.890	ENSORLG00000013588	nup35	80	51.890	Oryzias_latipes
MGP_SPRETEiJ_G0033063	-	97	51.890	ENSORLG00020008201	nup35	78	51.890	Oryzias_latipes_hni
MGP_SPRETEiJ_G0033063	-	97	52.740	ENSORLG00015011096	nup35	80	52.740	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0033063	-	97	51.546	ENSOMEG00000007628	nup35	78	51.546	Oryzias_melastigma
MGP_SPRETEiJ_G0033063	-	100	79.734	ENSOGAG00000011920	NUP35	81	80.399	Otolemur_garnettii
MGP_SPRETEiJ_G0033063	-	100	82.060	ENSOARG00000016728	NUP35	81	82.060	Ovis_aries
MGP_SPRETEiJ_G0033063	-	100	81.000	ENSPPAG00000036316	NUP35	97	77.021	Pan_paniscus
MGP_SPRETEiJ_G0033063	-	100	79.538	ENSPPRG00000024726	NUP35	86	79.538	Panthera_pardus
MGP_SPRETEiJ_G0033063	-	100	79.538	ENSPTIG00000017299	NUP35	81	79.538	Panthera_tigris_altaica
MGP_SPRETEiJ_G0033063	-	100	81.000	ENSPTRG00000012711	NUP35	97	77.021	Pan_troglodytes
MGP_SPRETEiJ_G0033063	-	100	80.667	ENSPANG00000013686	NUP35	81	80.667	Papio_anubis
MGP_SPRETEiJ_G0033063	-	100	62.458	ENSPKIG00000022051	nup35	84	62.458	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0033063	-	100	73.090	ENSPSIG00000002146	NUP35	86	73.090	Pelodiscus_sinensis
MGP_SPRETEiJ_G0033063	-	99	49.833	ENSPMGG00000022915	nup35	83	50.502	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0033063	-	100	83.612	ENSPEMG00000014718	-	81	83.612	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0033063	-	100	48.882	ENSPMAG00000006604	nup35	83	49.201	Petromyzon_marinus
MGP_SPRETEiJ_G0033063	-	100	76.080	ENSPCIG00000015482	NUP35	81	76.080	Phascolarctos_cinereus
MGP_SPRETEiJ_G0033063	-	96	50.699	ENSPFOG00000010020	nup35	78	51.546	Poecilia_formosa
MGP_SPRETEiJ_G0033063	-	96	50.350	ENSPLAG00000005867	nup35	78	51.546	Poecilia_latipinna
MGP_SPRETEiJ_G0033063	-	99	50.676	ENSPMEG00000010552	nup35	81	51.351	Poecilia_mexicana
MGP_SPRETEiJ_G0033063	-	97	50.859	ENSPREG00000021005	nup35	82	51.546	Poecilia_reticulata
MGP_SPRETEiJ_G0033063	-	100	81.000	ENSPPYG00000012998	-	65	81.000	Pongo_abelii
MGP_SPRETEiJ_G0033063	-	83	60.241	ENSPCAG00000000605	NUP35	65	60.241	Procavia_capensis
MGP_SPRETEiJ_G0033063	-	100	80.731	ENSPCOG00000024097	NUP35	81	81.395	Propithecus_coquereli
MGP_SPRETEiJ_G0033063	-	100	81.063	ENSPVAG00000015908	NUP35	81	81.063	Pteropus_vampyrus
MGP_SPRETEiJ_G0033063	-	98	51.020	ENSPNYG00000012486	nup35	77	51.020	Pundamilia_nyererei
MGP_SPRETEiJ_G0033063	-	99	65.552	ENSPNAG00000005181	nup35	83	65.552	Pygocentrus_nattereri
MGP_SPRETEiJ_G0033063	-	100	84.950	ENSRNOG00000009290	Nup35	81	84.950	Rattus_norvegicus
MGP_SPRETEiJ_G0033063	-	100	80.667	ENSRBIG00000039427	NUP35	98	77.922	Rhinopithecus_bieti
MGP_SPRETEiJ_G0033063	-	100	80.667	ENSRROG00000026525	NUP35	98	77.922	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0033063	-	100	80.000	ENSSBOG00000018676	NUP35	99	75.862	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0033063	-	100	76.744	ENSSHAG00000009746	NUP35	81	76.744	Sarcophilus_harrisii
MGP_SPRETEiJ_G0033063	-	100	63.333	ENSSFOG00015002390	nup35	83	63.333	Scleropages_formosus
MGP_SPRETEiJ_G0033063	-	97	50.685	ENSSMAG00000015651	nup35	80	50.685	Scophthalmus_maximus
MGP_SPRETEiJ_G0033063	-	96	51.034	ENSSDUG00000013118	nup35	80	51.195	Seriola_dumerili
MGP_SPRETEiJ_G0033063	-	97	50.853	ENSSLDG00000018249	nup35	79	51.027	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0033063	-	100	57.333	ENSSARG00000001535	-	85	57.333	Sorex_araneus
MGP_SPRETEiJ_G0033063	-	100	70.764	ENSSPUG00000018651	NUP35	82	70.764	Sphenodon_punctatus
MGP_SPRETEiJ_G0033063	-	99	51.171	ENSSPAG00000018264	nup35	80	51.171	Stegastes_partitus
MGP_SPRETEiJ_G0033063	-	100	80.731	ENSSSCG00000028949	NUP35	81	80.731	Sus_scrofa
MGP_SPRETEiJ_G0033063	-	100	69.637	ENSTGUG00000011278	NUP35	82	69.637	Taeniopygia_guttata
MGP_SPRETEiJ_G0033063	-	88	47.744	ENSTRUG00000014111	nup35	75	47.744	Takifugu_rubripes
MGP_SPRETEiJ_G0033063	-	85	47.244	ENSTNIG00000011568	nup35	71	47.244	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0033063	-	100	76.080	ENSTBEG00000003328	NUP35	81	76.080	Tupaia_belangeri
MGP_SPRETEiJ_G0033063	-	100	65.552	ENSTTRG00000002512	NUP35	78	65.552	Tursiops_truncatus
MGP_SPRETEiJ_G0033063	-	78	78.017	ENSUAMG00000018696	-	96	78.017	Ursus_americanus
MGP_SPRETEiJ_G0033063	-	92	78.929	ENSUMAG00000017104	NUP35	80	78.929	Ursus_maritimus
MGP_SPRETEiJ_G0033063	-	100	81.063	ENSVPAG00000011898	NUP35	81	81.063	Vicugna_pacos
MGP_SPRETEiJ_G0033063	-	100	80.528	ENSVVUG00000016832	NUP35	86	80.528	Vulpes_vulpes
MGP_SPRETEiJ_G0033063	-	100	55.960	ENSXETG00000001335	nup35	82	55.960	Xenopus_tropicalis
MGP_SPRETEiJ_G0033063	-	96	50.350	ENSXMAG00000000409	nup35	78	51.203	Xiphophorus_maculatus