EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_SPRETEiJ_G0033420 (Gene tree)
Gene ID
-
Gene Symbol
Edc3
Alias
Lsm16|Yjdc
Full Name
enhancer of mRNA decapping 3
Gene Type
protein_coding
Species
Mus_spretus
Status
putative
Strand
Plus strand
Length
43380 bases
Position
chr9:56669659-56713038
Accession
2142951
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_SPRETEiJ_P0091661FDFPF09532.103.7e-1711
MGP_SPRETEiJ_P0091663LSM14PF12701.74e-1111
MGP_SPRETEiJ_P0091661LSM14PF12701.71.3e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_SPRETEiJ_T0091663-443-MGP_SPRETEiJ_P009166365 (aa)-UPI0001889E0A
MGP_SPRETEiJ_T0091662-4292-MGP_SPRETEiJ_P009166257 (aa)-UPI0001889E09
MGP_SPRETEiJ_T0091661-5723-MGP_SPRETEiJ_P0091661508 (aa)--
Gene Model
Click here to download MGP_SPRETEiJ_G0033420's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0033420's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_SPRETEiJ_G0033420Edc310098.462ENSG00000179151EDC310098.246Homo_sapiens
MGP_SPRETEiJ_G0033420Edc310080.000ENSAPOG00000010791edc310068.959Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0033420Edc310073.846ENSAPOG00000008655EDC310055.899Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0033420Edc310096.923ENSAMEG00000008963EDC310094.882Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0033420Edc310072.308ENSACIG00000005330EDC39959.064Amphilophus_citrinellus
MGP_SPRETEiJ_G0033420Edc310078.947ENSACIG00000017751edc310068.566Amphilophus_citrinellus
MGP_SPRETEiJ_G0033420Edc310076.923ENSAOCG00000009103-10057.946Amphiprion_ocellaris
MGP_SPRETEiJ_G0033420Edc310080.000ENSAOCG00000005431edc310069.155Amphiprion_ocellaris
MGP_SPRETEiJ_G0033420Edc310080.000ENSAPEG00000000968edc310069.155Amphiprion_percula
MGP_SPRETEiJ_G0033420Edc310076.923ENSAPEG00000007841EDC310057.752Amphiprion_percula
MGP_SPRETEiJ_G0033420Edc310080.000ENSATEG00000015505edc310070.334Anabas_testudineus
MGP_SPRETEiJ_G0033420Edc310075.385ENSATEG00000004205-10058.447Anabas_testudineus
MGP_SPRETEiJ_G0033420Edc39087.033ENSAPLG00000008957EDC310086.374Anas_platyrhynchos
MGP_SPRETEiJ_G0033420Edc310092.308ENSACAG00000000460-10086.398Anolis_carolinensis
MGP_SPRETEiJ_G0033420Edc310098.462ENSANAG00000024078EDC310095.669Aotus_nancymaae
MGP_SPRETEiJ_G0033420Edc310078.947ENSACLG00000007232edc310068.173Astatotilapia_calliptera
MGP_SPRETEiJ_G0033420Edc310072.308ENSACLG00000018776-9958.090Astatotilapia_calliptera
MGP_SPRETEiJ_G0033420Edc310080.000ENSAMXG00000001589edc310070.588Astyanax_mexicanus
MGP_SPRETEiJ_G0033420Edc310098.462ENSBTAG00000007308EDC310094.882Bos_taurus
MGP_SPRETEiJ_G0033420Edc310098.462ENSCJAG00000017681EDC310095.669Callithrix_jacchus
MGP_SPRETEiJ_G0033420Edc310098.462ENSCAFG00000017935EDC310094.882Canis_familiaris
MGP_SPRETEiJ_G0033420Edc310098.462ENSCAFG00020003909EDC310094.882Canis_lupus_dingo
MGP_SPRETEiJ_G0033420Edc310098.462ENSCHIG00000023658EDC310095.472Capra_hircus
MGP_SPRETEiJ_G0033420Edc310098.462ENSTSYG00000004822EDC310095.079Carlito_syrichta
MGP_SPRETEiJ_G0033420Edc39698.182ENSCAPG00000000377-10098.182Cavia_aperea
MGP_SPRETEiJ_G0033420Edc310098.462ENSCPOG00000015595EDC310094.094Cavia_porcellus
MGP_SPRETEiJ_G0033420Edc310098.462ENSCCAG00000021663EDC310095.866Cebus_capucinus
MGP_SPRETEiJ_G0033420Edc310098.462ENSCATG00000037511EDC310095.866Cercocebus_atys
MGP_SPRETEiJ_G0033420Edc310098.462ENSCLAG00000005700EDC310094.488Chinchilla_lanigera
MGP_SPRETEiJ_G0033420Edc310098.462ENSCSAG00000014239EDC310095.866Chlorocebus_sabaeus
MGP_SPRETEiJ_G0033420Edc310096.923ENSCPBG00000024239EDC310088.780Chrysemys_picta_bellii
MGP_SPRETEiJ_G0033420Edc310038.077ENSCING00000022142-9937.885Ciona_intestinalis
MGP_SPRETEiJ_G0033420Edc310098.462ENSCANG00000028699EDC310095.866Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0033420Edc3100100.000ENSCGRG00001013874Edc310097.638Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0033420Edc3100100.000ENSCGRG00000011885Edc310097.638Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0033420Edc310080.000ENSCSEG00000012996edc39969.291Cynoglossus_semilaevis
MGP_SPRETEiJ_G0033420Edc310078.462ENSCVAG00000008023edc310068.566Cyprinodon_variegatus
MGP_SPRETEiJ_G0033420Edc310072.308ENSDARG00000051931edc39968.164Danio_rerio
MGP_SPRETEiJ_G0033420Edc310098.462ENSDNOG00000030661EDC310083.721Dasypus_novemcinctus
MGP_SPRETEiJ_G0033420Edc39698.182ENSDORG00000025261-10098.182Dipodomys_ordii
MGP_SPRETEiJ_G0033420Edc39596.296ENSETEG00000002398-6496.296Echinops_telfairi
MGP_SPRETEiJ_G0033420Edc310098.462ENSEASG00005005071EDC310095.669Equus_asinus_asinus
MGP_SPRETEiJ_G0033420Edc310098.462ENSECAG00000017994EDC310095.669Equus_caballus
MGP_SPRETEiJ_G0033420Edc310078.462ENSELUG00000005794edc310065.497Esox_lucius
MGP_SPRETEiJ_G0033420Edc310073.846ENSELUG00000007607EDC310062.427Esox_lucius
MGP_SPRETEiJ_G0033420Edc310096.923ENSFCAG00000002014EDC310094.685Felis_catus
MGP_SPRETEiJ_G0033420Edc310096.923ENSFALG00000004543EDC39684.569Ficedula_albicollis
MGP_SPRETEiJ_G0033420Edc310098.462ENSFDAG00000012582EDC310094.094Fukomys_damarensis
MGP_SPRETEiJ_G0033420Edc310078.462ENSFHEG00000009375edc310068.959Fundulus_heteroclitus
MGP_SPRETEiJ_G0033420Edc310080.000ENSGMOG00000002715edc310067.188Gadus_morhua
MGP_SPRETEiJ_G0033420Edc310096.923ENSGALG00000040181EDC310087.992Gallus_gallus
MGP_SPRETEiJ_G0033420Edc310078.462ENSGAFG00000014433edc310067.387Gambusia_affinis
MGP_SPRETEiJ_G0033420Edc310070.769ENSGACG00000014671EDC39956.140Gasterosteus_aculeatus
MGP_SPRETEiJ_G0033420Edc310076.923ENSGACG00000009783edc310068.173Gasterosteus_aculeatus
MGP_SPRETEiJ_G0033420Edc310096.923ENSGAGG00000023477EDC310087.795Gopherus_agassizii
MGP_SPRETEiJ_G0033420Edc310098.462ENSGGOG00000003552EDC310095.472Gorilla_gorilla
MGP_SPRETEiJ_G0033420Edc310078.947ENSHBUG00000003635edc310068.173Haplochromis_burtoni
MGP_SPRETEiJ_G0033420Edc310072.308ENSHBUG00000020817EDC39958.090Haplochromis_burtoni
MGP_SPRETEiJ_G0033420Edc39698.182ENSHGLG00000020876-10098.182Heterocephalus_glaber_female
MGP_SPRETEiJ_G0033420Edc39696.364ENSHGLG00100019573-10096.364Heterocephalus_glaber_male
MGP_SPRETEiJ_G0033420Edc310077.193ENSHCOG00000016834edc310067.710Hippocampus_comes
MGP_SPRETEiJ_G0033420Edc310076.923ENSIPUG00000005695edc310069.548Ictalurus_punctatus
MGP_SPRETEiJ_G0033420Edc310098.462ENSSTOG00000013936EDC310096.063Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0033420Edc310095.385ENSJJAG00000008074Edc310095.276Jaculus_jaculus
MGP_SPRETEiJ_G0033420Edc310089.474ENSJJAG00000012800-9184.375Jaculus_jaculus
MGP_SPRETEiJ_G0033420Edc310072.308ENSKMAG00000001987EDC310055.906Kryptolebias_marmoratus
MGP_SPRETEiJ_G0033420Edc310080.000ENSKMAG00000001243edc310068.762Kryptolebias_marmoratus
MGP_SPRETEiJ_G0033420Edc310072.308ENSLBEG00000017984EDC310057.087Labrus_bergylta
MGP_SPRETEiJ_G0033420Edc310078.462ENSLBEG00000013435edc39968.173Labrus_bergylta
MGP_SPRETEiJ_G0033420Edc310077.282ENSLACG00000014149EDC310077.282Latimeria_chalumnae
MGP_SPRETEiJ_G0033420Edc310078.462ENSLOCG00000014625edc39967.446Lepisosteus_oculatus
MGP_SPRETEiJ_G0033420Edc310096.923ENSLAFG00000002992EDC310093.504Loxodonta_africana
MGP_SPRETEiJ_G0033420Edc310098.462ENSMFAG00000043074EDC310095.669Macaca_fascicularis
MGP_SPRETEiJ_G0033420Edc310098.462ENSMMUG00000011071EDC310095.669Macaca_mulatta
MGP_SPRETEiJ_G0033420Edc310098.462ENSMNEG00000035316EDC310095.669Macaca_nemestrina
MGP_SPRETEiJ_G0033420Edc310098.462ENSMLEG00000030372EDC310095.866Mandrillus_leucophaeus
MGP_SPRETEiJ_G0033420Edc310080.000ENSMAMG00000000505edc310069.352Mastacembelus_armatus
MGP_SPRETEiJ_G0033420Edc310067.692ENSMAMG00000005423-9956.836Mastacembelus_armatus
MGP_SPRETEiJ_G0033420Edc310078.947ENSMZEG00005004892edc310068.173Maylandia_zebra
MGP_SPRETEiJ_G0033420Edc310072.308ENSMZEG00005005654EDC39958.789Maylandia_zebra
MGP_SPRETEiJ_G0033420Edc310096.923ENSMGAG00000002617EDC310087.205Meleagris_gallopavo
MGP_SPRETEiJ_G0033420Edc310096.923ENSMICG00000043190EDC310095.866Microcebus_murinus
MGP_SPRETEiJ_G0033420Edc310098.462ENSMOCG00000016205Edc310097.441Microtus_ochrogaster
MGP_SPRETEiJ_G0033420Edc310078.462ENSMMOG00000012278edc39968.307Mola_mola
MGP_SPRETEiJ_G0033420Edc310096.923ENSMODG00000009442EDC310091.929Monodelphis_domestica
MGP_SPRETEiJ_G0033420Edc310078.462ENSMALG00000008658edc310069.745Monopterus_albus
MGP_SPRETEiJ_G0033420Edc3100100.000MGP_CAROLIEiJ_G0032280Edc3100100.000Mus_caroli
MGP_SPRETEiJ_G0033420Edc3100100.000ENSMUSG00000038957Edc3100100.000Mus_musculus
MGP_SPRETEiJ_G0033420Edc3100100.000MGP_PahariEiJ_G0015146Edc3100100.000Mus_pahari
MGP_SPRETEiJ_G0033420Edc310096.923ENSMPUG00000017293EDC310094.488Mustela_putorius_furo
MGP_SPRETEiJ_G0033420Edc310096.923ENSMLUG00000016382EDC310094.510Myotis_lucifugus
MGP_SPRETEiJ_G0033420Edc3100100.000ENSNGAG00000010923Edc310096.457Nannospalax_galili
MGP_SPRETEiJ_G0033420Edc310078.947ENSNBRG00000002434edc310067.976Neolamprologus_brichardi
MGP_SPRETEiJ_G0033420Edc310072.308ENSNBRG00000007881EDC39958.398Neolamprologus_brichardi
MGP_SPRETEiJ_G0033420Edc310098.462ENSNLEG00000014577EDC310085.827Nomascus_leucogenys
MGP_SPRETEiJ_G0033420Edc310096.923ENSMEUG00000009077EDC310090.157Notamacropus_eugenii
MGP_SPRETEiJ_G0033420Edc39594.444ENSOPRG00000009540-7994.444Ochotona_princeps
MGP_SPRETEiJ_G0033420Edc39698.182ENSODEG00000020214-10098.182Octodon_degus
MGP_SPRETEiJ_G0033420Edc310072.308ENSONIG00000002932-9959.454Oreochromis_niloticus
MGP_SPRETEiJ_G0033420Edc310078.947ENSONIG00000008434edc310068.369Oreochromis_niloticus
MGP_SPRETEiJ_G0033420Edc310098.462ENSOANG00000030799-9581.046Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0033420Edc310095.385ENSOCUG00000017740EDC38690.680Oryctolagus_cuniculus
MGP_SPRETEiJ_G0033420Edc310076.923ENSORLG00000004883edc310067.780Oryzias_latipes
MGP_SPRETEiJ_G0033420Edc310070.769ENSORLG00000014399-9856.055Oryzias_latipes
MGP_SPRETEiJ_G0033420Edc310076.923ENSORLG00020012262edc310067.583Oryzias_latipes_hni
MGP_SPRETEiJ_G0033420Edc310070.769ENSORLG00020019446-10056.055Oryzias_latipes_hni
MGP_SPRETEiJ_G0033420Edc310072.308ENSORLG00015017635-9656.055Oryzias_latipes_hsok
MGP_SPRETEiJ_G0033420Edc310076.923ENSORLG00015005634edc310067.780Oryzias_latipes_hsok
MGP_SPRETEiJ_G0033420Edc310076.923ENSOMEG00000014026edc310068.173Oryzias_melastigma
MGP_SPRETEiJ_G0033420Edc310070.769ENSOMEG00000017354EDC310055.469Oryzias_melastigma
MGP_SPRETEiJ_G0033420Edc310098.462ENSOGAG00000014441EDC310096.260Otolemur_garnettii
MGP_SPRETEiJ_G0033420Edc310098.462ENSOARG00000003476EDC310095.088Ovis_aries
MGP_SPRETEiJ_G0033420Edc310098.462ENSPPAG00000040143EDC310095.472Pan_paniscus
MGP_SPRETEiJ_G0033420Edc310096.923ENSPPRG00000006257EDC310094.488Panthera_pardus
MGP_SPRETEiJ_G0033420Edc310096.923ENSPTIG00000017424EDC310094.488Panthera_tigris_altaica
MGP_SPRETEiJ_G0033420Edc310098.462ENSPTRG00000007279EDC310095.472Pan_troglodytes
MGP_SPRETEiJ_G0033420Edc310098.462ENSPANG00000015997EDC310095.866Papio_anubis
MGP_SPRETEiJ_G0033420Edc310080.702ENSPKIG00000004416edc310069.727Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0033420Edc310066.602ENSPKIG00000019810EDC310066.602Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0033420Edc310092.308ENSPSIG00000008474EDC310082.874Pelodiscus_sinensis
MGP_SPRETEiJ_G0033420Edc310078.947ENSPMGG00000007223edc310066.732Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0033420Edc310096.923ENSPEMG00000015260Edc310096.457Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0033420Edc310098.462ENSPCIG00000006276EDC37089.349Phascolarctos_cinereus
MGP_SPRETEiJ_G0033420Edc310078.462ENSPFOG00000012204edc310068.959Poecilia_formosa
MGP_SPRETEiJ_G0033420Edc310078.462ENSPLAG00000014420edc310068.959Poecilia_latipinna
MGP_SPRETEiJ_G0033420Edc310078.462ENSPMEG00000023289edc310068.959Poecilia_mexicana
MGP_SPRETEiJ_G0033420Edc310078.462ENSPREG00000016022edc310068.959Poecilia_reticulata
MGP_SPRETEiJ_G0033420Edc310098.462ENSPPYG00000006642EDC310094.291Pongo_abelii
MGP_SPRETEiJ_G0033420Edc39598.148ENSPCAG00000002802EDC38898.148Procavia_capensis
MGP_SPRETEiJ_G0033420Edc310098.462ENSPCOG00000013364EDC310095.669Propithecus_coquereli
MGP_SPRETEiJ_G0033420Edc310098.462ENSPVAG00000014733EDC310094.488Pteropus_vampyrus
MGP_SPRETEiJ_G0033420Edc310078.947ENSPNYG00000021797edc310068.173Pundamilia_nyererei
MGP_SPRETEiJ_G0033420Edc310072.308ENSPNYG00000009669EDC39958.090Pundamilia_nyererei
MGP_SPRETEiJ_G0033420Edc310080.000ENSPNAG00000019657edc310070.233Pygocentrus_nattereri
MGP_SPRETEiJ_G0033420Edc39998.617ENSRNOG00000019579Edc310098.617Rattus_norvegicus
MGP_SPRETEiJ_G0033420Edc310096.923ENSRBIG00000019488EDC310095.472Rhinopithecus_bieti
MGP_SPRETEiJ_G0033420Edc310096.923ENSRROG00000034959EDC310095.472Rhinopithecus_roxellana
MGP_SPRETEiJ_G0033420Edc310098.462ENSSBOG00000004896EDC310095.669Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0033420Edc310098.462ENSSHAG00000015075EDC39590.798Sarcophilus_harrisii
MGP_SPRETEiJ_G0033420Edc310080.000ENSSFOG00015002439edc39077.273Scleropages_formosus
MGP_SPRETEiJ_G0033420Edc310078.462ENSSFOG00015016939edc310069.674Scleropages_formosus
MGP_SPRETEiJ_G0033420Edc310070.769ENSSMAG00000010176-9956.385Scophthalmus_maximus
MGP_SPRETEiJ_G0033420Edc310076.923ENSSMAG00000010695edc310068.173Scophthalmus_maximus
MGP_SPRETEiJ_G0033420Edc310073.846ENSSDUG00000007671EDC38973.134Seriola_dumerili
MGP_SPRETEiJ_G0033420Edc310078.462ENSSDUG00000021844edc310068.369Seriola_dumerili
MGP_SPRETEiJ_G0033420Edc310078.947ENSSLDG00000008406-10078.947Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0033420Edc310078.462ENSSLDG00000022046edc310068.369Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0033420Edc310093.846ENSSARG00000003907EDC38096.774Sorex_araneus
MGP_SPRETEiJ_G0033420Edc310098.462ENSSPUG00000008232EDC310088.780Sphenodon_punctatus
MGP_SPRETEiJ_G0033420Edc310073.846ENSSPAG00000020327EDC310057.588Stegastes_partitus
MGP_SPRETEiJ_G0033420Edc310080.000ENSSPAG00000010009edc310069.745Stegastes_partitus
MGP_SPRETEiJ_G0033420Edc310098.462ENSSSCG00000001903EDC310095.669Sus_scrofa
MGP_SPRETEiJ_G0033420Edc310096.923ENSTGUG00000004007EDC310087.795Taeniopygia_guttata
MGP_SPRETEiJ_G0033420Edc310076.923ENSTRUG00000017078edc310069.352Takifugu_rubripes
MGP_SPRETEiJ_G0033420Edc310074.627ENSTNIG00000016047edc310067.515Tetraodon_nigroviridis
MGP_SPRETEiJ_G0033420Edc310098.462ENSTTRG00000007990EDC310094.685Tursiops_truncatus
MGP_SPRETEiJ_G0033420Edc39696.364ENSUAMG00000002788-10096.364Ursus_americanus
MGP_SPRETEiJ_G0033420Edc310096.923ENSUAMG00000026710-10094.882Ursus_americanus
MGP_SPRETEiJ_G0033420Edc310096.923ENSUMAG00000005006EDC39694.882Ursus_maritimus
MGP_SPRETEiJ_G0033420Edc39585.185ENSVPAG00000003499-7985.185Vicugna_pacos
MGP_SPRETEiJ_G0033420Edc310098.462ENSVVUG00000018601EDC310095.079Vulpes_vulpes
MGP_SPRETEiJ_G0033420Edc36881.897ENSXETG00000010622edc39983.046Xenopus_tropicalis
MGP_SPRETEiJ_G0033420Edc310078.462ENSXMAG00000007377edc310068.566Xiphophorus_maculatus

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