EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0033452 (Gene tree)
Gene ID: -
Gene Symbol: Larp6
Alias: 5430431G03Rik|Achn|acheron
Full Name: La ribonucleoprotein domain family%2C member 6
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 18648 bases
Position: chr9:59855858-59874505
Accession: 1914807
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0091815	La	PF05383.17	2.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0091815	-	2440	-	MGP_SPRETEiJ_P0091815	492 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0033452's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0033452's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0033452	Larp6	100	90.854	ENSG00000166173	LARP6	100	96.774	Homo_sapiens
MGP_SPRETEiJ_G0033452	Larp6	95	57.320	ENSAPOG00000021773	larp6a	63	59.101	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0033452	Larp6	87	91.822	ENSAMEG00000008897	LARP6	100	91.822	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0033452	Larp6	97	57.809	ENSACIG00000005166	larp6a	87	58.278	Amphilophus_citrinellus
MGP_SPRETEiJ_G0033452	Larp6	95	57.320	ENSAOCG00000002284	larp6a	63	59.101	Amphiprion_ocellaris
MGP_SPRETEiJ_G0033452	Larp6	95	57.320	ENSAPEG00000008077	larp6a	84	59.101	Amphiprion_percula
MGP_SPRETEiJ_G0033452	Larp6	95	56.907	ENSATEG00000004018	larp6a	62	58.202	Anabas_testudineus
MGP_SPRETEiJ_G0033452	Larp6	85	70.686	ENSAPLG00000009914	LARP6	99	70.686	Anas_platyrhynchos
MGP_SPRETEiJ_G0033452	Larp6	84	68.750	ENSACAG00000008613	LARP6	98	68.990	Anolis_carolinensis
MGP_SPRETEiJ_G0033452	Larp6	100	90.854	ENSANAG00000024860	LARP6	100	90.854	Aotus_nancymaae
MGP_SPRETEiJ_G0033452	Larp6	97	57.606	ENSACLG00000018561	larp6a	62	58.242	Astatotilapia_calliptera
MGP_SPRETEiJ_G0033452	Larp6	85	40.783	ENSAMXG00000036816	-	93	41.304	Astyanax_mexicanus
MGP_SPRETEiJ_G0033452	Larp6	90	57.391	ENSAMXG00000029387	larp6a	68	57.987	Astyanax_mexicanus
MGP_SPRETEiJ_G0033452	Larp6	100	89.431	ENSBTAG00000003915	LARP6	100	89.431	Bos_taurus
MGP_SPRETEiJ_G0033452	Larp6	100	90.244	ENSCJAG00000046236	-	100	90.244	Callithrix_jacchus
MGP_SPRETEiJ_G0033452	Larp6	100	90.650	ENSCJAG00000018642	-	100	90.650	Callithrix_jacchus
MGP_SPRETEiJ_G0033452	Larp6	86	92.689	ENSCAFG00000017616	LARP6	99	92.689	Canis_familiaris
MGP_SPRETEiJ_G0033452	Larp6	100	89.634	ENSCAFG00020007296	LARP6	100	90.041	Canis_lupus_dingo
MGP_SPRETEiJ_G0033452	Larp6	100	89.634	ENSCHIG00000013742	LARP6	100	89.634	Capra_hircus
MGP_SPRETEiJ_G0033452	Larp6	86	91.745	ENSTSYG00000028124	LARP6	87	91.745	Carlito_syrichta
MGP_SPRETEiJ_G0033452	Larp6	86	89.412	ENSCAPG00000015452	LARP6	100	89.412	Cavia_aperea
MGP_SPRETEiJ_G0033452	Larp6	100	87.424	ENSCPOG00000022687	LARP6	100	87.424	Cavia_porcellus
MGP_SPRETEiJ_G0033452	Larp6	100	90.447	ENSCCAG00000036320	LARP6	100	90.447	Cebus_capucinus
MGP_SPRETEiJ_G0033452	Larp6	100	90.650	ENSCATG00000042432	LARP6	100	90.650	Cercocebus_atys
MGP_SPRETEiJ_G0033452	Larp6	100	90.669	ENSCLAG00000007893	LARP6	100	90.669	Chinchilla_lanigera
MGP_SPRETEiJ_G0033452	Larp6	100	90.854	ENSCSAG00000013672	LARP6	100	90.854	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0033452	Larp6	97	88.679	ENSCHOG00000003318	LARP6	99	88.679	Choloepus_hoffmanni
MGP_SPRETEiJ_G0033452	Larp6	89	69.794	ENSCPBG00000010771	LARP6	84	69.794	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0033452	Larp6	86	93.160	ENSCANG00000025833	LARP6	99	93.160	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0033452	Larp6	100	95.325	ENSCGRG00001024472	Larp6	100	95.325	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0033452	Larp6	100	95.325	ENSCGRG00000004527	Larp6	100	95.325	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0033452	Larp6	95	57.438	ENSCSEG00000011196	larp6a	65	57.658	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0033452	Larp6	88	58.370	ENSCVAG00000009605	larp6a	66	58.370	Cyprinodon_variegatus
MGP_SPRETEiJ_G0033452	Larp6	87	58.036	ENSDARG00000005355	larp6a	96	60.941	Danio_rerio
MGP_SPRETEiJ_G0033452	Larp6	100	88.821	ENSDNOG00000042993	LARP6	100	89.024	Dasypus_novemcinctus
MGP_SPRETEiJ_G0033452	Larp6	100	81.174	ENSDORG00000023910	Larp6	100	80.567	Dipodomys_ordii
MGP_SPRETEiJ_G0033452	Larp6	79	90.400	ENSETEG00000020390	LARP6	78	86.260	Echinops_telfairi
MGP_SPRETEiJ_G0033452	Larp6	100	91.260	ENSEASG00005005490	LARP6	73	91.260	Equus_asinus_asinus
MGP_SPRETEiJ_G0033452	Larp6	100	91.057	ENSECAG00000014190	LARP6	100	91.057	Equus_caballus
MGP_SPRETEiJ_G0033452	Larp6	88	57.860	ENSELUG00000007341	larp6a	66	57.424	Esox_lucius
MGP_SPRETEiJ_G0033452	Larp6	100	90.650	ENSFCAG00000001361	LARP6	100	90.650	Felis_catus
MGP_SPRETEiJ_G0033452	Larp6	88	68.182	ENSFALG00000012389	LARP6	99	64.583	Ficedula_albicollis
MGP_SPRETEiJ_G0033452	Larp6	100	82.724	ENSFDAG00000019994	LARP6	86	90.227	Fukomys_damarensis
MGP_SPRETEiJ_G0033452	Larp6	88	58.370	ENSFHEG00000010312	larp6a	64	57.709	Fundulus_heteroclitus
MGP_SPRETEiJ_G0033452	Larp6	89	69.841	ENSGALG00000004046	LARP6	89	69.841	Gallus_gallus
MGP_SPRETEiJ_G0033452	Larp6	88	58.811	ENSGAFG00000009426	larp6a	65	59.193	Gambusia_affinis
MGP_SPRETEiJ_G0033452	Larp6	86	59.268	ENSGACG00000014622	larp6a	97	58.352	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0033452	Larp6	80	70.202	ENSGAGG00000010802	LARP6	58	70.202	Gopherus_agassizii
MGP_SPRETEiJ_G0033452	Larp6	86	93.396	ENSGGOG00000024151	LARP6	99	93.396	Gorilla_gorilla
MGP_SPRETEiJ_G0033452	Larp6	97	57.606	ENSHBUG00000021014	larp6a	62	58.242	Haplochromis_burtoni
MGP_SPRETEiJ_G0033452	Larp6	100	89.293	ENSHGLG00000015112	LARP6	100	89.293	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0033452	Larp6	86	92.689	ENSHGLG00100013159	LARP6	99	92.689	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0033452	Larp6	97	55.912	ENSHCOG00000001241	larp6a	86	58.150	Hippocampus_comes
MGP_SPRETEiJ_G0033452	Larp6	85	37.825	ENSIPUG00000002828	-	94	38.686	Ictalurus_punctatus
MGP_SPRETEiJ_G0033452	Larp6	86	59.326	ENSIPUG00000010187	larp6	65	60.277	Ictalurus_punctatus
MGP_SPRETEiJ_G0033452	Larp6	94	91.974	ENSSTOG00000024279	LARP6	99	92.325	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0033452	Larp6	100	88.618	ENSJJAG00000011013	Larp6	100	88.821	Jaculus_jaculus
MGP_SPRETEiJ_G0033452	Larp6	89	59.430	ENSKMAG00000001702	larp6a	61	59.430	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0033452	Larp6	95	55.441	ENSLBEG00000000170	larp6a	84	57.047	Labrus_bergylta
MGP_SPRETEiJ_G0033452	Larp6	97	64.375	ENSLACG00000018706	LARP6	90	63.333	Latimeria_chalumnae
MGP_SPRETEiJ_G0033452	Larp6	84	41.628	ENSLACG00000002786	-	98	42.118	Latimeria_chalumnae
MGP_SPRETEiJ_G0033452	Larp6	96	59.627	ENSLOCG00000014592	larp6a	69	59.016	Lepisosteus_oculatus
MGP_SPRETEiJ_G0033452	Larp6	84	45.561	ENSLOCG00000008547	-	82	43.692	Lepisosteus_oculatus
MGP_SPRETEiJ_G0033452	Larp6	91	90.828	ENSLAFG00000016343	LARP6	100	90.828	Loxodonta_africana
MGP_SPRETEiJ_G0033452	Larp6	91	93.333	ENSMFAG00000035507	LARP6	100	93.333	Macaca_fascicularis
MGP_SPRETEiJ_G0033452	Larp6	100	88.821	ENSMMUG00000004429	LARP6	100	88.821	Macaca_mulatta
MGP_SPRETEiJ_G0033452	Larp6	100	90.854	ENSMNEG00000045335	LARP6	100	90.854	Macaca_nemestrina
MGP_SPRETEiJ_G0033452	Larp6	86	93.160	ENSMLEG00000038587	LARP6	99	93.160	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0033452	Larp6	95	57.290	ENSMAMG00000005261	larp6a	62	58.389	Mastacembelus_armatus
MGP_SPRETEiJ_G0033452	Larp6	97	57.606	ENSMZEG00005005774	larp6a	62	58.242	Maylandia_zebra
MGP_SPRETEiJ_G0033452	Larp6	85	71.090	ENSMGAG00000005077	LARP6	99	71.090	Meleagris_gallopavo
MGP_SPRETEiJ_G0033452	Larp6	100	95.732	ENSMAUG00000018486	Larp6	100	95.732	Mesocricetus_auratus
MGP_SPRETEiJ_G0033452	Larp6	100	88.415	ENSMICG00000011234	LARP6	100	88.415	Microcebus_murinus
MGP_SPRETEiJ_G0033452	Larp6	100	95.528	ENSMOCG00000010492	Larp6	100	95.528	Microtus_ochrogaster
MGP_SPRETEiJ_G0033452	Larp6	95	58.058	ENSMMOG00000016284	larp6a	85	59.009	Mola_mola
MGP_SPRETEiJ_G0033452	Larp6	97	74.167	ENSMODG00000009034	LARP6	93	73.511	Monodelphis_domestica
MGP_SPRETEiJ_G0033452	Larp6	95	57.290	ENSMALG00000014439	larp6a	84	58.389	Monopterus_albus
MGP_SPRETEiJ_G0033452	Larp6	100	98.780	MGP_CAROLIEiJ_G0032314	Larp6	100	98.780	Mus_caroli
MGP_SPRETEiJ_G0033452	Larp6	100	99.187	ENSMUSG00000034839	Larp6	100	99.187	Mus_musculus
MGP_SPRETEiJ_G0033452	Larp6	100	97.561	MGP_PahariEiJ_G0015180	Larp6	100	97.561	Mus_pahari
MGP_SPRETEiJ_G0033452	Larp6	87	92.056	ENSMPUG00000017086	LARP6	100	92.056	Mustela_putorius_furo
MGP_SPRETEiJ_G0033452	Larp6	100	90.244	ENSMLUG00000010319	LARP6	100	90.244	Myotis_lucifugus
MGP_SPRETEiJ_G0033452	Larp6	100	90.041	ENSNGAG00000014238	Larp6	100	90.041	Nannospalax_galili
MGP_SPRETEiJ_G0033452	Larp6	97	57.606	ENSNBRG00000008120	larp6a	86	58.242	Neolamprologus_brichardi
MGP_SPRETEiJ_G0033452	Larp6	100	90.650	ENSNLEG00000013691	LARP6	100	90.447	Nomascus_leucogenys
MGP_SPRETEiJ_G0033452	Larp6	84	74.294	ENSMEUG00000002270	LARP6	97	64.938	Notamacropus_eugenii
MGP_SPRETEiJ_G0033452	Larp6	72	80.114	ENSOPRG00000004868	-	100	80.114	Ochotona_princeps
MGP_SPRETEiJ_G0033452	Larp6	100	86.815	ENSODEG00000015958	LARP6	100	86.815	Octodon_degus
MGP_SPRETEiJ_G0033452	Larp6	97	57.374	ENSONIG00000002901	larp6a	86	58.206	Oreochromis_niloticus
MGP_SPRETEiJ_G0033452	Larp6	86	82.588	ENSOCUG00000009306	LARP6	100	82.588	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0033452	Larp6	95	57.732	ENSORLG00000014256	larp6a	86	59.551	Oryzias_latipes
MGP_SPRETEiJ_G0033452	Larp6	95	57.732	ENSORLG00020019657	larp6a	63	59.685	Oryzias_latipes_hni
MGP_SPRETEiJ_G0033452	Larp6	95	57.732	ENSORLG00015017915	larp6a	63	59.685	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0033452	Larp6	95	58.144	ENSOMEG00000017049	larp6a	63	60.135	Oryzias_melastigma
MGP_SPRETEiJ_G0033452	Larp6	100	89.024	ENSOGAG00000000522	LARP6	100	89.024	Otolemur_garnettii
MGP_SPRETEiJ_G0033452	Larp6	87	90.187	ENSOARG00000018750	LARP6	99	90.187	Ovis_aries
MGP_SPRETEiJ_G0033452	Larp6	86	93.396	ENSPPAG00000031247	LARP6	99	93.396	Pan_paniscus
MGP_SPRETEiJ_G0033452	Larp6	100	90.041	ENSPPRG00000011282	LARP6	100	90.041	Panthera_pardus
MGP_SPRETEiJ_G0033452	Larp6	86	91.962	ENSPTIG00000015318	LARP6	86	91.962	Panthera_tigris_altaica
MGP_SPRETEiJ_G0033452	Larp6	100	90.854	ENSPTRG00000007234	LARP6	100	90.854	Pan_troglodytes
MGP_SPRETEiJ_G0033452	Larp6	100	90.854	ENSPANG00000016362	LARP6	100	90.854	Papio_anubis
MGP_SPRETEiJ_G0033452	Larp6	98	58.012	ENSPKIG00000020103	larp6a	84	59.732	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0033452	Larp6	97	56.487	ENSPKIG00000004511	LARP6	67	57.174	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0033452	Larp6	62	79.808	ENSPSIG00000009071	LARP6	91	73.913	Pelodiscus_sinensis
MGP_SPRETEiJ_G0033452	Larp6	95	57.938	ENSPMGG00000006958	larp6a	86	59.101	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0033452	Larp6	100	95.122	ENSPEMG00000012909	Larp6	100	95.122	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0033452	Larp6	97	75.208	ENSPCIG00000020765	LARP6	93	75.208	Phascolarctos_cinereus
MGP_SPRETEiJ_G0033452	Larp6	87	59.598	ENSPFOG00000014175	larp6a	84	59.598	Poecilia_formosa
MGP_SPRETEiJ_G0033452	Larp6	87	59.641	ENSPLAG00000011105	larp6a	64	59.251	Poecilia_latipinna
MGP_SPRETEiJ_G0033452	Larp6	87	59.417	ENSPMEG00000011085	larp6a	64	59.031	Poecilia_mexicana
MGP_SPRETEiJ_G0033452	Larp6	95	57.613	ENSPREG00000008067	larp6a	64	58.811	Poecilia_reticulata
MGP_SPRETEiJ_G0033452	Larp6	100	90.854	ENSPPYG00000006604	LARP6	100	90.854	Pongo_abelii
MGP_SPRETEiJ_G0033452	Larp6	65	91.018	ENSPCAG00000014197	LARP6	76	91.018	Procavia_capensis
MGP_SPRETEiJ_G0033452	Larp6	100	88.821	ENSPCOG00000022934	LARP6	100	88.821	Propithecus_coquereli
MGP_SPRETEiJ_G0033452	Larp6	100	89.431	ENSPVAG00000005618	LARP6	100	89.431	Pteropus_vampyrus
MGP_SPRETEiJ_G0033452	Larp6	97	57.606	ENSPNYG00000009835	larp6a	86	58.242	Pundamilia_nyererei
MGP_SPRETEiJ_G0033452	Larp6	97	56.024	ENSPNAG00000017966	larp6a	79	56.627	Pygocentrus_nattereri
MGP_SPRETEiJ_G0033452	Larp6	100	95.935	ENSRNOG00000012438	Larp6	100	95.935	Rattus_norvegicus
MGP_SPRETEiJ_G0033452	Larp6	98	89.072	ENSRBIG00000032902	LARP6	98	89.072	Rhinopithecus_bieti
MGP_SPRETEiJ_G0033452	Larp6	98	91.511	ENSRROG00000043074	LARP6	98	91.511	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0033452	Larp6	86	92.925	ENSSBOG00000024190	LARP6	99	92.925	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0033452	Larp6	87	74.766	ENSSHAG00000018495	LARP6	100	74.766	Sarcophilus_harrisii
MGP_SPRETEiJ_G0033452	Larp6	86	60.780	ENSSFOG00015023268	larp6a	84	60.829	Scleropages_formosus
MGP_SPRETEiJ_G0033452	Larp6	95	53.040	ENSSFOG00015002254	LARP6	83	56.293	Scleropages_formosus
MGP_SPRETEiJ_G0033452	Larp6	97	57.287	ENSSMAG00000009953	larp6a	63	58.370	Scophthalmus_maximus
MGP_SPRETEiJ_G0033452	Larp6	95	57.819	ENSSDUG00000007438	larp6a	62	58.969	Seriola_dumerili
MGP_SPRETEiJ_G0033452	Larp6	95	57.819	ENSSLDG00000016647	larp6a	62	58.969	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0033452	Larp6	86	71.564	ENSSPUG00000011312	LARP6	99	71.564	Sphenodon_punctatus
MGP_SPRETEiJ_G0033452	Larp6	95	57.320	ENSSPAG00000020502	larp6a	62	59.101	Stegastes_partitus
MGP_SPRETEiJ_G0033452	Larp6	100	89.431	ENSSSCG00000004974	LARP6	100	89.431	Sus_scrofa
MGP_SPRETEiJ_G0033452	Larp6	85	69.431	ENSTGUG00000005808	LARP6	99	69.431	Taeniopygia_guttata
MGP_SPRETEiJ_G0033452	Larp6	96	56.855	ENSTRUG00000003151	larp6a	66	58.079	Takifugu_rubripes
MGP_SPRETEiJ_G0033452	Larp6	95	56.341	ENSTNIG00000011926	larp6a	88	57.692	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0033452	Larp6	86	89.412	ENSTBEG00000015077	LARP6	99	89.835	Tupaia_belangeri
MGP_SPRETEiJ_G0033452	Larp6	99	82.618	ENSUAMG00000010467	LARP6	87	90.698	Ursus_americanus
MGP_SPRETEiJ_G0033452	Larp6	86	92.453	ENSVVUG00000015227	LARP6	94	92.453	Vulpes_vulpes
MGP_SPRETEiJ_G0033452	Larp6	96	65.546	ENSXETG00000020340	larp6	93	65.966	Xenopus_tropicalis
MGP_SPRETEiJ_G0033452	Larp6	87	59.417	ENSXCOG00000012654	larp6a	89	59.417	Xiphophorus_couchianus
MGP_SPRETEiJ_G0033452	Larp6	87	59.417	ENSXMAG00000021015	larp6a	60	59.417	Xiphophorus_maculatus