EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0033509 (Gene tree)
Gene ID: -
Gene Symbol: Trip4
Alias: 4930558E03Rik|ASC-1
Full Name: thyroid hormone receptor interactor 4
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 78540 bases
Position: chr9:65280148-65358687
Accession: 1928469
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0092006	ASCH	PF04266.14	3.7e-19	1	1
MGP_SPRETEiJ_P0092007	ASCH	PF04266.14	3.7e-19	1	1
MGP_SPRETEiJ_P0092005	ASCH	PF04266.14	4.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0092014	-	576	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0092006	-	4222	-	MGP_SPRETEiJ_P0092006	581 (aa)	-	-
MGP_SPRETEiJ_T0092007	-	1999	-	MGP_SPRETEiJ_P0092007	581 (aa)	-	-
MGP_SPRETEiJ_T0092005	-	6259	-	MGP_SPRETEiJ_P0092005	595 (aa)	-	-
MGP_SPRETEiJ_T0092013	-	709	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0092008	-	508	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0092009	-	661	-	MGP_SPRETEiJ_P0092009	56 (aa)	-	UPI000164C389

Gene Model

Click here to download MGP_SPRETEiJ_G0033509's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0033509's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0033509	Trip4	100	88.985	ENSG00000103671	TRIP4	100	88.985	Homo_sapiens
MGP_SPRETEiJ_G0033509	Trip4	95	45.438	ENSAPOG00000023326	trip4	97	45.438	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0033509	Trip4	100	85.542	ENSAMEG00000002591	TRIP4	100	85.542	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0033509	Trip4	95	52.236	ENSACIG00000010577	trip4	97	52.236	Amphilophus_citrinellus
MGP_SPRETEiJ_G0033509	Trip4	96	52.548	ENSAOCG00000000395	trip4	96	53.427	Amphiprion_ocellaris
MGP_SPRETEiJ_G0033509	Trip4	97	57.439	ENSAPEG00000003621	trip4	99	58.304	Amphiprion_percula
MGP_SPRETEiJ_G0033509	Trip4	97	58.348	ENSATEG00000019577	trip4	99	58.864	Anabas_testudineus
MGP_SPRETEiJ_G0033509	Trip4	99	69.640	ENSAPLG00000004612	TRIP4	99	69.640	Anas_platyrhynchos
MGP_SPRETEiJ_G0033509	Trip4	98	68.111	ENSACAG00000007077	TRIP4	90	68.631	Anolis_carolinensis
MGP_SPRETEiJ_G0033509	Trip4	100	87.780	ENSANAG00000027612	TRIP4	100	87.780	Aotus_nancymaae
MGP_SPRETEiJ_G0033509	Trip4	98	59.585	ENSACLG00000013819	trip4	99	60.522	Astatotilapia_calliptera
MGP_SPRETEiJ_G0033509	Trip4	97	60.417	ENSAMXG00000007270	trip4	99	60.938	Astyanax_mexicanus
MGP_SPRETEiJ_G0033509	Trip4	99	84.165	ENSBTAG00000014493	TRIP4	99	84.165	Bos_taurus
MGP_SPRETEiJ_G0033509	Trip4	100	87.091	ENSCJAG00000005107	TRIP4	100	87.091	Callithrix_jacchus
MGP_SPRETEiJ_G0033509	Trip4	100	85.542	ENSCAFG00000017091	TRIP4	100	85.542	Canis_familiaris
MGP_SPRETEiJ_G0033509	Trip4	100	85.542	ENSCAFG00020008960	TRIP4	100	85.542	Canis_lupus_dingo
MGP_SPRETEiJ_G0033509	Trip4	97	83.630	ENSCHIG00000023818	TRIP4	98	83.630	Capra_hircus
MGP_SPRETEiJ_G0033509	Trip4	100	87.780	ENSTSYG00000007185	TRIP4	100	87.780	Carlito_syrichta
MGP_SPRETEiJ_G0033509	Trip4	70	83.929	ENSCAPG00000017624	TRIP4	92	76.027	Cavia_aperea
MGP_SPRETEiJ_G0033509	Trip4	100	87.435	ENSCPOG00000006483	TRIP4	100	87.435	Cavia_porcellus
MGP_SPRETEiJ_G0033509	Trip4	100	82.272	ENSCCAG00000026483	TRIP4	100	82.272	Cebus_capucinus
MGP_SPRETEiJ_G0033509	Trip4	100	88.985	ENSCATG00000041144	TRIP4	100	88.985	Cercocebus_atys
MGP_SPRETEiJ_G0033509	Trip4	100	88.640	ENSCLAG00000006872	TRIP4	100	88.640	Chinchilla_lanigera
MGP_SPRETEiJ_G0033509	Trip4	100	88.812	ENSCSAG00000012499	TRIP4	100	88.812	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0033509	Trip4	82	72.727	ENSCHOG00000010776	TRIP4	82	72.727	Choloepus_hoffmanni
MGP_SPRETEiJ_G0033509	Trip4	97	68.310	ENSCPBG00000006093	TRIP4	97	69.730	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0033509	Trip4	99	41.722	ENSCSAVG00000005293	-	99	41.722	Ciona_savignyi
MGP_SPRETEiJ_G0033509	Trip4	100	85.370	ENSCANG00000033593	TRIP4	100	85.370	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0033509	Trip4	100	94.664	ENSCGRG00001021158	Trip4	100	94.664	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0033509	Trip4	91	92.500	ENSCGRG00000002340	Trip4	100	92.500	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0033509	Trip4	97	57.487	ENSCSEG00000009015	trip4	98	57.659	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0033509	Trip4	89	57.765	ENSCVAG00000021094	-	90	57.765	Cyprinodon_variegatus
MGP_SPRETEiJ_G0033509	Trip4	90	58.240	ENSCVAG00000020984	trip4	99	58.240	Cyprinodon_variegatus
MGP_SPRETEiJ_G0033509	Trip4	97	59.511	ENSDARG00000098074	trip4	99	60.035	Danio_rerio
MGP_SPRETEiJ_G0033509	Trip4	100	84.682	ENSDNOG00000008654	TRIP4	100	84.682	Dasypus_novemcinctus
MGP_SPRETEiJ_G0033509	Trip4	100	89.673	ENSDORG00000014914	Trip4	100	89.673	Dipodomys_ordii
MGP_SPRETEiJ_G0033509	Trip4	87	36.902	FBgn0031115	CG11710	93	36.902	Drosophila_melanogaster
MGP_SPRETEiJ_G0033509	Trip4	100	81.058	ENSETEG00000001597	TRIP4	100	81.058	Echinops_telfairi
MGP_SPRETEiJ_G0033509	Trip4	97	47.818	ENSEBUG00000009039	trip4	98	47.735	Eptatretus_burgeri
MGP_SPRETEiJ_G0033509	Trip4	100	86.919	ENSEASG00005006538	TRIP4	100	86.919	Equus_asinus_asinus
MGP_SPRETEiJ_G0033509	Trip4	93	84.375	ENSECAG00000024689	TRIP4	99	84.375	Equus_caballus
MGP_SPRETEiJ_G0033509	Trip4	81	83.770	ENSEEUG00000007741	TRIP4	80	83.770	Erinaceus_europaeus
MGP_SPRETEiJ_G0033509	Trip4	98	56.186	ENSELUG00000022449	trip4	99	56.186	Esox_lucius
MGP_SPRETEiJ_G0033509	Trip4	100	86.059	ENSFCAG00000010618	TRIP4	100	86.059	Felis_catus
MGP_SPRETEiJ_G0033509	Trip4	98	68.166	ENSFALG00000009816	TRIP4	99	68.339	Ficedula_albicollis
MGP_SPRETEiJ_G0033509	Trip4	100	87.263	ENSFDAG00000017051	TRIP4	100	87.263	Fukomys_damarensis
MGP_SPRETEiJ_G0033509	Trip4	97	58.864	ENSFHEG00000015795	trip4	99	58.864	Fundulus_heteroclitus
MGP_SPRETEiJ_G0033509	Trip4	97	57.217	ENSGMOG00000008455	trip4	99	57.217	Gadus_morhua
MGP_SPRETEiJ_G0033509	Trip4	100	68.995	ENSGALG00000030672	TRIP4	99	68.995	Gallus_gallus
MGP_SPRETEiJ_G0033509	Trip4	97	59.099	ENSGAFG00000003491	trip4	99	59.099	Gambusia_affinis
MGP_SPRETEiJ_G0033509	Trip4	98	57.586	ENSGACG00000016986	trip4	99	57.525	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0033509	Trip4	81	70.711	ENSGAGG00000003671	TRIP4	85	70.711	Gopherus_agassizii
MGP_SPRETEiJ_G0033509	Trip4	100	88.812	ENSGGOG00000022608	TRIP4	100	88.812	Gorilla_gorilla
MGP_SPRETEiJ_G0033509	Trip4	98	59.585	ENSHBUG00000021071	trip4	99	60.522	Haplochromis_burtoni
MGP_SPRETEiJ_G0033509	Trip4	100	87.608	ENSHGLG00000009286	TRIP4	100	87.608	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0033509	Trip4	100	87.435	ENSHGLG00100017760	TRIP4	100	87.435	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0033509	Trip4	97	58.333	ENSHCOG00000017904	trip4	98	58.854	Hippocampus_comes
MGP_SPRETEiJ_G0033509	Trip4	98	58.997	ENSIPUG00000013205	trip4	99	59.689	Ictalurus_punctatus
MGP_SPRETEiJ_G0033509	Trip4	100	88.296	ENSSTOG00000014228	TRIP4	100	88.296	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0033509	Trip4	97	80.749	ENSJJAG00000001629	Trip4	99	80.749	Jaculus_jaculus
MGP_SPRETEiJ_G0033509	Trip4	97	61.257	ENSKMAG00000001297	trip4	99	61.257	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0033509	Trip4	98	57.612	ENSLBEG00000018354	trip4	99	58.404	Labrus_bergylta
MGP_SPRETEiJ_G0033509	Trip4	98	63.194	ENSLACG00000014856	TRIP4	99	63.103	Latimeria_chalumnae
MGP_SPRETEiJ_G0033509	Trip4	98	62.718	ENSLOCG00000014993	trip4	99	62.718	Lepisosteus_oculatus
MGP_SPRETEiJ_G0033509	Trip4	100	85.026	ENSLAFG00000017612	TRIP4	100	85.026	Loxodonta_africana
MGP_SPRETEiJ_G0033509	Trip4	100	88.640	ENSMFAG00000036568	TRIP4	100	88.640	Macaca_fascicularis
MGP_SPRETEiJ_G0033509	Trip4	100	88.640	ENSMMUG00000009882	TRIP4	100	88.640	Macaca_mulatta
MGP_SPRETEiJ_G0033509	Trip4	100	88.812	ENSMNEG00000033592	TRIP4	100	88.812	Macaca_nemestrina
MGP_SPRETEiJ_G0033509	Trip4	100	88.640	ENSMLEG00000027911	TRIP4	100	88.640	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0033509	Trip4	97	58.103	ENSMAMG00000013374	trip4	99	58.103	Mastacembelus_armatus
MGP_SPRETEiJ_G0033509	Trip4	98	59.585	ENSMZEG00005013450	trip4	99	60.522	Maylandia_zebra
MGP_SPRETEiJ_G0033509	Trip4	100	88.985	ENSMICG00000008679	TRIP4	100	88.985	Microcebus_murinus
MGP_SPRETEiJ_G0033509	Trip4	100	94.836	ENSMOCG00000012669	Trip4	100	94.836	Microtus_ochrogaster
MGP_SPRETEiJ_G0033509	Trip4	95	57.651	ENSMMOG00000002315	trip4	98	58.185	Mola_mola
MGP_SPRETEiJ_G0033509	Trip4	100	78.522	ENSMODG00000010743	TRIP4	91	78.522	Monodelphis_domestica
MGP_SPRETEiJ_G0033509	Trip4	100	98.795	MGP_CAROLIEiJ_G0032370	Trip4	100	98.795	Mus_caroli
MGP_SPRETEiJ_G0033509	Trip4	100	99.312	ENSMUSG00000032386	Trip4	100	99.312	Mus_musculus
MGP_SPRETEiJ_G0033509	Trip4	100	97.935	MGP_PahariEiJ_G0015235	Trip4	100	97.935	Mus_pahari
MGP_SPRETEiJ_G0033509	Trip4	100	85.542	ENSMPUG00000000568	TRIP4	100	85.542	Mustela_putorius_furo
MGP_SPRETEiJ_G0033509	Trip4	95	85.818	ENSMLUG00000013367	TRIP4	100	85.818	Myotis_lucifugus
MGP_SPRETEiJ_G0033509	Trip4	100	91.424	ENSNGAG00000019566	Trip4	100	91.424	Nannospalax_galili
MGP_SPRETEiJ_G0033509	Trip4	96	58.907	ENSNBRG00000020663	trip4	97	59.788	Neolamprologus_brichardi
MGP_SPRETEiJ_G0033509	Trip4	100	88.640	ENSNLEG00000012455	TRIP4	100	88.640	Nomascus_leucogenys
MGP_SPRETEiJ_G0033509	Trip4	72	73.333	ENSMEUG00000005886	TRIP4	86	73.333	Notamacropus_eugenii
MGP_SPRETEiJ_G0033509	Trip4	100	82.616	ENSOPRG00000009512	TRIP4	100	82.616	Ochotona_princeps
MGP_SPRETEiJ_G0033509	Trip4	100	86.575	ENSODEG00000016494	TRIP4	100	86.575	Octodon_degus
MGP_SPRETEiJ_G0033509	Trip4	89	59.238	ENSONIG00000005703	trip4	98	59.238	Oreochromis_niloticus
MGP_SPRETEiJ_G0033509	Trip4	98	77.233	ENSOANG00000013357	TRIP4	96	77.233	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0033509	Trip4	100	87.780	ENSOCUG00000002322	TRIP4	100	87.780	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0033509	Trip4	97	57.292	ENSORLG00000001710	trip4	99	57.639	Oryzias_latipes
MGP_SPRETEiJ_G0033509	Trip4	97	57.785	ENSORLG00020022346	trip4	99	58.131	Oryzias_latipes_hni
MGP_SPRETEiJ_G0033509	Trip4	97	57.216	ENSORLG00015022509	trip4	99	57.560	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0033509	Trip4	97	60.000	ENSOMEG00000007655	trip4	99	60.348	Oryzias_melastigma
MGP_SPRETEiJ_G0033509	Trip4	100	78.902	ENSOGAG00000012427	TRIP4	100	78.902	Otolemur_garnettii
MGP_SPRETEiJ_G0033509	Trip4	99	84.165	ENSOARG00000020739	TRIP4	99	84.165	Ovis_aries
MGP_SPRETEiJ_G0033509	Trip4	100	88.812	ENSPPAG00000017953	TRIP4	100	88.812	Pan_paniscus
MGP_SPRETEiJ_G0033509	Trip4	100	85.886	ENSPPRG00000013668	TRIP4	100	85.886	Panthera_pardus
MGP_SPRETEiJ_G0033509	Trip4	100	85.886	ENSPTIG00000014502	TRIP4	100	85.886	Panthera_tigris_altaica
MGP_SPRETEiJ_G0033509	Trip4	100	80.723	ENSPTRG00000007160	TRIP4	100	80.723	Pan_troglodytes
MGP_SPRETEiJ_G0033509	Trip4	100	88.985	ENSPANG00000016750	TRIP4	100	88.985	Papio_anubis
MGP_SPRETEiJ_G0033509	Trip4	98	59.067	ENSPKIG00000022978	-	99	59.067	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0033509	Trip4	89	57.656	ENSPKIG00000009253	trip4	99	57.656	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0033509	Trip4	94	69.189	ENSPSIG00000012082	TRIP4	98	69.189	Pelodiscus_sinensis
MGP_SPRETEiJ_G0033509	Trip4	98	54.514	ENSPMGG00000019015	trip4	98	54.688	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0033509	Trip4	100	90.706	ENSPEMG00000012446	Trip4	100	90.706	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0033509	Trip4	100	77.320	ENSPCIG00000029450	TRIP4	95	77.320	Phascolarctos_cinereus
MGP_SPRETEiJ_G0033509	Trip4	97	58.406	ENSPFOG00000014732	trip4	99	58.406	Poecilia_formosa
MGP_SPRETEiJ_G0033509	Trip4	97	57.877	ENSPLAG00000013794	trip4	99	57.877	Poecilia_latipinna
MGP_SPRETEiJ_G0033509	Trip4	97	58.579	ENSPMEG00000001331	trip4	99	58.579	Poecilia_mexicana
MGP_SPRETEiJ_G0033509	Trip4	97	57.712	ENSPREG00000006576	trip4	99	57.712	Poecilia_reticulata
MGP_SPRETEiJ_G0033509	Trip4	100	88.640	ENSPPYG00000006550	TRIP4	100	88.640	Pongo_abelii
MGP_SPRETEiJ_G0033509	Trip4	98	73.509	ENSPCAG00000016310	TRIP4	100	73.322	Procavia_capensis
MGP_SPRETEiJ_G0033509	Trip4	100	72.852	ENSPCOG00000013484	TRIP4	100	72.633	Propithecus_coquereli
MGP_SPRETEiJ_G0033509	Trip4	96	75.313	ENSPVAG00000016613	TRIP4	100	75.313	Pteropus_vampyrus
MGP_SPRETEiJ_G0033509	Trip4	98	56.522	ENSPNYG00000011318	trip4	98	56.522	Pundamilia_nyererei
MGP_SPRETEiJ_G0033509	Trip4	98	59.722	ENSPNAG00000020884	trip4	99	60.243	Pygocentrus_nattereri
MGP_SPRETEiJ_G0033509	Trip4	100	94.664	ENSRNOG00000016121	Trip4	100	94.664	Rattus_norvegicus
MGP_SPRETEiJ_G0033509	Trip4	88	90.400	ENSRBIG00000038027	TRIP4	100	90.400	Rhinopithecus_bieti
MGP_SPRETEiJ_G0033509	Trip4	100	88.985	ENSRROG00000030525	TRIP4	100	88.985	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0033509	Trip4	100	76.076	ENSSBOG00000020516	TRIP4	100	77.015	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0033509	Trip4	94	79.015	ENSSHAG00000000040	TRIP4	100	79.015	Sarcophilus_harrisii
MGP_SPRETEiJ_G0033509	Trip4	97	59.686	ENSSFOG00015000143	trip4	98	59.860	Scleropages_formosus
MGP_SPRETEiJ_G0033509	Trip4	97	57.539	ENSSMAG00000010539	trip4	99	57.539	Scophthalmus_maximus
MGP_SPRETEiJ_G0033509	Trip4	97	56.995	ENSSDUG00000000225	trip4	99	58.031	Seriola_dumerili
MGP_SPRETEiJ_G0033509	Trip4	97	57.093	ENSSLDG00000000215	trip4	99	57.785	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0033509	Trip4	84	84.770	ENSSARG00000003710	TRIP4	83	84.770	Sorex_araneus
MGP_SPRETEiJ_G0033509	Trip4	96	61.470	ENSSPUG00000004511	TRIP4	98	62.254	Sphenodon_punctatus
MGP_SPRETEiJ_G0033509	Trip4	97	58.020	ENSSPAG00000008520	trip4	99	58.020	Stegastes_partitus
MGP_SPRETEiJ_G0033509	Trip4	100	85.886	ENSSSCG00000004552	TRIP4	100	86.400	Sus_scrofa
MGP_SPRETEiJ_G0033509	Trip4	98	68.706	ENSTGUG00000004673	TRIP4	100	68.706	Taeniopygia_guttata
MGP_SPRETEiJ_G0033509	Trip4	97	56.477	ENSTRUG00000016488	trip4	99	56.995	Takifugu_rubripes
MGP_SPRETEiJ_G0033509	Trip4	98	56.775	ENSTNIG00000009582	trip4	98	56.775	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0033509	Trip4	94	88.321	ENSTBEG00000015881	TRIP4	100	88.321	Tupaia_belangeri
MGP_SPRETEiJ_G0033509	Trip4	89	88.281	ENSTTRG00000009674	TRIP4	89	88.281	Tursiops_truncatus
MGP_SPRETEiJ_G0033509	Trip4	100	85.542	ENSUMAG00000012640	TRIP4	100	85.542	Ursus_maritimus
MGP_SPRETEiJ_G0033509	Trip4	100	81.928	ENSVPAG00000010808	TRIP4	100	81.928	Vicugna_pacos
MGP_SPRETEiJ_G0033509	Trip4	100	85.886	ENSVVUG00000013776	TRIP4	100	85.886	Vulpes_vulpes
MGP_SPRETEiJ_G0033509	Trip4	97	60.069	ENSXETG00000010649	trip4	97	60.069	Xenopus_tropicalis
MGP_SPRETEiJ_G0033509	Trip4	97	58.579	ENSXMAG00000000526	trip4	99	59.445	Xiphophorus_maculatus